RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 CLRN2A0PK11 232 aa20.59■□□□□ 0.89
VRK2-204ENST00000428021 APOBEC3FQ8IUX4 373 aaKnown RBP20.59■□□□□ 0.89
VRK2-204ENST00000428021 GBA2Q9HCG7 927 aaPredicted RBP20.59■□□□□ 0.89
VRK2-204ENST00000428021 SALL1Q9NSC2 1324 aa20.58■□□□□ 0.89
VRK2-204ENST00000428021 RRP1P56182 461 aaKnown RBP20.58■□□□□ 0.89
VRK2-204ENST00000428021 EXOC6BQ9Y2D4 811 aa20.58■□□□□ 0.89
VRK2-204ENST00000428021 PDS5AQ29RF7 1337 aaKnown RBP20.57■□□□□ 0.88
VRK2-204ENST00000428021 MYO1BO43795 1136 aa20.57■□□□□ 0.88
VRK2-204ENST00000428021 PRDX5P30044 214 aa20.57■□□□□ 0.88
VRK2-204ENST00000428021 SPDYE2Q495Y8 402 aa20.57■□□□□ 0.88
VRK2-204ENST00000428021 C2orf69Q8N8R5 385 aa20.57■□□□□ 0.88
VRK2-204ENST00000428021 HHIPL1Q96JK4 782 aa20.57■□□□□ 0.88
VRK2-204ENST00000428021 DEFB129Q9H1M3 183 aa20.57■□□□□ 0.88
VRK2-204ENST00000428021 TDRD3Q9H7E2 651 aaKnown RBP20.57■□□□□ 0.88
VRK2-204ENST00000428021 ZNF70Q9UC06 446 aaPredicted RBP20.57■□□□□ 0.88
VRK2-204ENST00000428021 WDR33Q9C0J8 1336 aaKnown RBP20.56■□□□□ 0.88
VRK2-204ENST00000428021 ARID4AP29374 1257 aaPredicted RBP20.56■□□□□ 0.88
VRK2-204ENST00000428021 GORABQ5T7V8 394 aa20.56■□□□□ 0.88
VRK2-204ENST00000428021 CYP4F22Q6NT55 531 aa20.56■□□□□ 0.88
VRK2-204ENST00000428021 HHIPL2Q6UWX4 724 aa20.56■□□□□ 0.88
VRK2-204ENST00000428021 TEKT1Q969V4 418 aa20.56■□□□□ 0.88
VRK2-204ENST00000428021 CAPNS2Q96L46 248 aa20.56■□□□□ 0.88
VRK2-204ENST00000428021 ZDHHC15Q96MV8 337 aa20.56■□□□□ 0.88
VRK2-204ENST00000428021 DBNDD2Q9BQY9 259 aa20.56■□□□□ 0.88
VRK2-204ENST00000428021 MAST3O60307 1309 aa20.55■□□□□ 0.88
VRK2-204ENST00000428021 HMMRO75330 724 aa20.55■□□□□ 0.88
VRK2-204ENST00000428021 HUNKP57058 714 aa20.55■□□□□ 0.88
VRK2-204ENST00000428021 APOBEC3HQ6NTF7 200 aaKnown RBP20.55■□□□□ 0.88
VRK2-204ENST00000428021 EAF2Q96CJ1 260 aaPredicted RBP20.55■□□□□ 0.88
VRK2-204ENST00000428021 VEZTQ9HBM0 779 aa20.55■□□□□ 0.88
VRK2-204ENST00000428021 HMG20BQ9P0W2 317 aa20.55■□□□□ 0.88
VRK2-204ENST00000428021 LDHBP07195 334 aaKnown RBP20.54■□□□□ 0.88
VRK2-204ENST00000428021 PI16Q6UXB8 463 aa20.54■□□□□ 0.88
VRK2-204ENST00000428021 ERC1Q8IUD2 1116 aa20.54■□□□□ 0.88
VRK2-204ENST00000428021 DBNLQ9UJU6 430 aaKnown RBP20.54■□□□□ 0.88
VRK2-204ENST00000428021 PAPPA2Q9BXP8 1791 aa20.54■□□□□ 0.88
VRK2-204ENST00000428021 MCAMP43121 646 aa20.53■□□□□ 0.88
VRK2-204ENST00000428021 DIXDC1Q155Q3 683 aa20.53■□□□□ 0.88
VRK2-204ENST00000428021 HSP90AB4PQ58FF6 505 aa20.53■□□□□ 0.88
VRK2-204ENST00000428021 MOB2Q70IA6 237 aa20.53■□□□□ 0.88
VRK2-204ENST00000428021 SPATA5Q8NB90 893 aa20.53■□□□□ 0.88
VRK2-204ENST00000428021 CCDC8Q9H0W5 538 aaPredicted RBP20.53■□□□□ 0.88
VRK2-204ENST00000428021 TLR7Q9NYK1 1049 aaKnown RBP20.53■□□□□ 0.88
VRK2-204ENST00000428021 UQCRFS1P1P0C7P4 283 aa20.52■□□□□ 0.88
VRK2-204ENST00000428021 ECE1P42892 770 aa20.52■□□□□ 0.88
VRK2-204ENST00000428021 FKBP1BP68106 108 aa20.52■□□□□ 0.88
VRK2-204ENST00000428021 RASA3Q14644 834 aa20.52■□□□□ 0.88
VRK2-204ENST00000428021 PAXIP1Q6ZW49 1069 aaPredicted RBP20.52■□□□□ 0.88
VRK2-204ENST00000428021 ZGPATQ8N5A5 531 aaKnown RBP20.52■□□□□ 0.88
VRK2-204ENST00000428021 RHPN1Q8TCX5 695 aa20.52■□□□□ 0.88
VRK2-204ENST00000428021 DAGLAQ9Y4D2 1042 aa20.52■□□□□ 0.88
VRK2-204ENST00000428021 PPP2R3BQ9Y5P8 575 aa20.52■□□□□ 0.88
VRK2-204ENST00000428021 AKAP11Q9UKA4 1901 aa20.52■□□□□ 0.88
VRK2-204ENST00000428021 THSD7BQ9C0I4 1608 aa20.52■□□□□ 0.88
VRK2-204ENST00000428021 ZNF512BQ96KM6 892 aaPredicted RBP20.51■□□□□ 0.87
VRK2-204ENST00000428021 IL1RAPL2Q9NP60 686 aa20.51■□□□□ 0.87
VRK2-204ENST00000428021 ABCF2Q9UG63 623 aa20.51■□□□□ 0.87
VRK2-204ENST00000428021 SSC5DA1L4H1 1573 aa20.51■□□□□ 0.87
VRK2-204ENST00000428021 UBE2Q2LH0YL09 131 aa20.5■□□□□ 0.87
VRK2-204ENST00000428021 AOC2O75106 756 aa20.5■□□□□ 0.87
VRK2-204ENST00000428021 GRM1Q13255 1194 aa20.5■□□□□ 0.87
VRK2-204ENST00000428021 CCDC158Q5M9N0 1113 aa20.5■□□□□ 0.87
VRK2-204ENST00000428021 TTC39AQ5SRH9 613 aa20.5■□□□□ 0.87
VRK2-204ENST00000428021 RGMBQ6NW40 437 aa20.5■□□□□ 0.87
VRK2-204ENST00000428021 TBC1D9Q6ZT07 1266 aa20.5■□□□□ 0.87
VRK2-204ENST00000428021 ZNF384Q8TF68 577 aa20.5■□□□□ 0.87
VRK2-204ENST00000428021 MYH2Q9UKX2 1941 aa20.5■□□□□ 0.87
VRK2-204ENST00000428021 FAM155AB1AL88 458 aaPredicted RBP20.49■□□□□ 0.87
VRK2-204ENST00000428021 TCP10L2B9ZVM9 353 aa20.49■□□□□ 0.87
VRK2-204ENST00000428021 NF2P35240 595 aa20.49■□□□□ 0.87
VRK2-204ENST00000428021 CACNB3P54284 484 aa20.49■□□□□ 0.87
VRK2-204ENST00000428021 TNFAIP1Q13829 316 aa20.49■□□□□ 0.87
VRK2-204ENST00000428021 NBPF12Q5TAG4 269 aaPredicted RBP20.49■□□□□ 0.87
VRK2-204ENST00000428021 SPTY2D1Q68D10 685 aaPredicted RBP20.49■□□□□ 0.87
VRK2-204ENST00000428021 AACSQ86V21 672 aa20.49■□□□□ 0.87
VRK2-204ENST00000428021 KIF1BPQ96EK5 621 aa20.49■□□□□ 0.87
VRK2-204ENST00000428021 TEPSINQ96N21 525 aa20.49■□□□□ 0.87
VRK2-204ENST00000428021 SNRKQ9NRH2 765 aa20.49■□□□□ 0.87
VRK2-204ENST00000428021 APBB1O00213 710 aa20.48■□□□□ 0.87
VRK2-204ENST00000428021 RAB11FIP3O75154 756 aa20.48■□□□□ 0.87
VRK2-204ENST00000428021 HSPA1AP0DMV8 641 aaKnown RBP20.48■□□□□ 0.87
VRK2-204ENST00000428021 HSPA1BP0DMV9 641 aaKnown RBP20.48■□□□□ 0.87
VRK2-204ENST00000428021 FKBP1CQ5VVH2 108 aa20.48■□□□□ 0.87
VRK2-204ENST00000428021 ERICH6Q7L0X2 663 aa20.48■□□□□ 0.87
VRK2-204ENST00000428021 CDAN1Q8IWY9 1227 aa20.48■□□□□ 0.87
VRK2-204ENST00000428021 ZIC5Q96T25 663 aa20.48■□□□□ 0.87
VRK2-204ENST00000428021 FZD1Q9UP38 647 aa20.48■□□□□ 0.87
VRK2-204ENST00000428021 GAKO14976 1311 aa20.48■□□□□ 0.87
VRK2-204ENST00000428021 MAP2K2P36507 400 aa20.47■□□□□ 0.87
VRK2-204ENST00000428021 ZNF157P51786 506 aaPredicted RBP20.47■□□□□ 0.87
VRK2-204ENST00000428021 MECOMQ03112 1051 aa20.47■□□□□ 0.87
VRK2-204ENST00000428021 PRKG1Q13976 671 aa20.47■□□□□ 0.87
VRK2-204ENST00000428021 CDC42EP5Q6NZY7 148 aa20.47■□□□□ 0.87
VRK2-204ENST00000428021 DZIP1Q86YF9 867 aaKnown RBP20.47■□□□□ 0.87
VRK2-204ENST00000428021 FAM163AQ96GL9 167 aaPredicted RBP20.47■□□□□ 0.87
VRK2-204ENST00000428021 CRBNQ96SW2 442 aa20.47■□□□□ 0.87
VRK2-204ENST00000428021 TMEM39BQ9GZU3 492 aa20.47■□□□□ 0.87
VRK2-204ENST00000428021 WBP1LQ9NX94 342 aa20.47■□□□□ 0.87
VRK2-204ENST00000428021 PCDHB15Q9Y5E8 787 aa20.47■□□□□ 0.87
VRK2-204ENST00000428021 TTLL12Q14166 644 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms