RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 SLF2Q8IX21 1173 aa18.4■□□□□ 0.54
VARS2-203ENST00000428017 PI4K2BQ8TCG2 481 aa18.4■□□□□ 0.54
VARS2-203ENST00000428017 IGSF3O75054 1194 aa18.39■□□□□ 0.53
VARS2-203ENST00000428017 GSTO1P78417 241 aa18.39■□□□□ 0.53
VARS2-203ENST00000428017 MAP3K12Q12852 859 aa18.39■□□□□ 0.53
VARS2-203ENST00000428017 DLGAP5Q15398 846 aa18.39■□□□□ 0.53
VARS2-203ENST00000428017 GRIK5Q16478 980 aa18.39■□□□□ 0.53
VARS2-203ENST00000428017 EAPPQ56P03 285 aaPredicted RBP18.39■□□□□ 0.53
VARS2-203ENST00000428017 PNMA8AQ86V59 439 aaPredicted RBP18.39■□□□□ 0.53
VARS2-203ENST00000428017 TEKT1Q969V4 418 aa18.39■□□□□ 0.53
VARS2-203ENST00000428017 TAF1DQ9H5J8 278 aaPredicted RBP18.39■□□□□ 0.53
VARS2-203ENST00000428017 MYOZ2Q9NPC6 264 aa18.39■□□□□ 0.53
VARS2-203ENST00000428017 PIH1D3Q9NQM4 214 aaKnown RBP18.39■□□□□ 0.53
VARS2-203ENST00000428017 SHTN1A0MZ66 631 aa18.38■□□□□ 0.53
VARS2-203ENST00000428017 PDE4AP27815 886 aa18.38■□□□□ 0.53
VARS2-203ENST00000428017 HDLBPQ00341 1268 aaKnown RBP18.38■□□□□ 0.53
VARS2-203ENST00000428017 KIF4BQ2VIQ3 1234 aa18.38■□□□□ 0.53
VARS2-203ENST00000428017 TBC1D10BQ4KMP7 808 aaPredicted RBP18.38■□□□□ 0.53
VARS2-203ENST00000428017 USP50Q70EL3 339 aaPredicted RBP18.38■□□□□ 0.53
VARS2-203ENST00000428017 SAMD7Q7Z3H4 446 aa18.38■□□□□ 0.53
VARS2-203ENST00000428017 ZNF784Q8NCA9 323 aaPredicted RBP18.38■□□□□ 0.53
VARS2-203ENST00000428017 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.38■□□□□ 0.532e-9■■■■■ 48.7
VARS2-203ENST00000428017 OSBPL3Q9H4L5 887 aa18.38■□□□□ 0.53
VARS2-203ENST00000428017 ANTXR1Q9H6X2 564 aa18.38■□□□□ 0.53
VARS2-203ENST00000428017 SERPINA10Q9UK55 444 aa18.38■□□□□ 0.53
VARS2-203ENST00000428017 MAP4K4O95819 1239 aaPredicted RBP18.37■□□□□ 0.53
VARS2-203ENST00000428017 LDHCP07864 332 aa18.37■□□□□ 0.53
VARS2-203ENST00000428017 CRKP46108 304 aa18.37■□□□□ 0.53
VARS2-203ENST00000428017 MECOMQ03112 1051 aa18.37■□□□□ 0.53
VARS2-203ENST00000428017 EDC3Q96F86 508 aaKnown RBP18.37■□□□□ 0.53
VARS2-203ENST00000428017 WDR90Q96KV7 1748 aa18.37■□□□□ 0.53
VARS2-203ENST00000428017 POTECB2RU33 542 aa18.36■□□□□ 0.53
VARS2-203ENST00000428017 MYO1BO43795 1136 aa18.36■□□□□ 0.53
VARS2-203ENST00000428017 DIXDC1Q155Q3 683 aa18.36■□□□□ 0.53
VARS2-203ENST00000428017 LRRFIP1Q32MZ4 808 aaKnown RBP18.36■□□□□ 0.53
VARS2-203ENST00000428017 CFAP100Q494V2 611 aa18.36■□□□□ 0.53
VARS2-203ENST00000428017 NAA16Q6N069 864 aaPredicted RBP18.36■□□□□ 0.53
VARS2-203ENST00000428017 HHIPL2Q6UWX4 724 aa18.36■□□□□ 0.53
VARS2-203ENST00000428017 NOL10Q9BSC4 688 aaKnown RBP18.36■□□□□ 0.53
VARS2-203ENST00000428017 MRIQ9BWK5 157 aa18.36■□□□□ 0.53
VARS2-203ENST00000428017 PSME4Q14997 1843 aa18.35■□□□□ 0.53
VARS2-203ENST00000428017 TRIM6-TRIM34B2RNG4 842 aa18.35■□□□□ 0.53
VARS2-203ENST00000428017 ZSCAN25Q6NSZ9 544 aa18.35■□□□□ 0.53
VARS2-203ENST00000428017 TRPM4Q8TD43 1214 aa18.35■□□□□ 0.53
VARS2-203ENST00000428017 NSUN4Q96CB9 384 aaKnown RBP18.35■□□□□ 0.53
VARS2-203ENST00000428017 CLEC11AQ9Y240 323 aa18.35■□□□□ 0.53
VARS2-203ENST00000428017 GTF3C3Q9Y5Q9 886 aa18.35■□□□□ 0.53
VARS2-203ENST00000428017 RGS3P49796 1198 aa18.34■□□□□ 0.53
VARS2-203ENST00000428017 SLC9C2Q5TAH2 1124 aa18.34■□□□□ 0.53
VARS2-203ENST00000428017 TMED8Q6PL24 325 aaPredicted RBP18.34■□□□□ 0.53
VARS2-203ENST00000428017 CNTROBQ8N137 903 aa18.34■□□□□ 0.53
VARS2-203ENST00000428017 MAGEB6Q8N7X4 407 aa18.34■□□□□ 0.53
VARS2-203ENST00000428017 MTMR14Q8NCE2 650 aa18.34■□□□□ 0.53
VARS2-203ENST00000428017 EVI5LQ96CN4 794 aa18.34■□□□□ 0.53
VARS2-203ENST00000428017 FSD1Q9BTV5 496 aa18.34■□□□□ 0.53
VARS2-203ENST00000428017 MYH13Q9UKX3 1938 aa18.33■□□□□ 0.53
VARS2-203ENST00000428017 SPDYE2BA6NHP3 402 aa18.33■□□□□ 0.52
VARS2-203ENST00000428017 SPDYE6P0CI01 402 aa18.33■□□□□ 0.52
VARS2-203ENST00000428017 CYP7A1P22680 504 aa18.33■□□□□ 0.52
VARS2-203ENST00000428017 KBTBD3Q8NAB2 608 aa18.33■□□□□ 0.52
VARS2-203ENST00000428017 RILPL2Q969X0 211 aa18.33■□□□□ 0.52
VARS2-203ENST00000428017 ZDHHC15Q96MV8 337 aa18.33■□□□□ 0.52
VARS2-203ENST00000428017 DAGLAQ9Y4D2 1042 aa18.33■□□□□ 0.52
VARS2-203ENST00000428017 MROH7-TTC4A0A0A0MT08 1334 aa18.32■□□□□ 0.52
VARS2-203ENST00000428017 WNT10BO00744 389 aa18.32■□□□□ 0.52
VARS2-203ENST00000428017 BAG3O95817 575 aa18.32■□□□□ 0.52
VARS2-203ENST00000428017 EGFRP00533 1210 aa18.32■□□□□ 0.52
VARS2-203ENST00000428017 TTC22Q5TAA0 569 aa18.32■□□□□ 0.52
VARS2-203ENST00000428017 TMOD2Q9NZR1 351 aa18.32■□□□□ 0.52
VARS2-203ENST00000428017 SCN4AP35499 1836 aa18.31■□□□□ 0.52
VARS2-203ENST00000428017 PDE6AP16499 860 aa18.31■□□□□ 0.52
VARS2-203ENST00000428017 HIRAP54198 1017 aaPredicted RBP18.31■□□□□ 0.52
VARS2-203ENST00000428017 NBPF9Q3BBW0 867 aa18.31■□□□□ 0.52
VARS2-203ENST00000428017 LDHDQ86WU2 507 aa18.31■□□□□ 0.52
VARS2-203ENST00000428017 ZC3H15Q8WU90 426 aaKnown RBP18.31■□□□□ 0.52
VARS2-203ENST00000428017 DCPSQ96C86 337 aaKnown RBP18.31■□□□□ 0.52
VARS2-203ENST00000428017 FAM163AQ96GL9 167 aaPredicted RBP18.31■□□□□ 0.52
VARS2-203ENST00000428017 PRMT6Q96LA8 375 aaPredicted RBP18.31■□□□□ 0.52
VARS2-203ENST00000428017 ZNF646O15015 1829 aaPredicted RBP18.3■□□□□ 0.52
VARS2-203ENST00000428017 GAKO14976 1311 aa18.3■□□□□ 0.52
VARS2-203ENST00000428017 ZFYP08048 801 aaPredicted RBP18.3■□□□□ 0.52
VARS2-203ENST00000428017 BTDP43251 543 aa18.3■□□□□ 0.52
VARS2-203ENST00000428017 SKAP1Q86WV1 359 aa18.3■□□□□ 0.52
VARS2-203ENST00000428017 PCDHAC2Q9Y5I4 1007 aa18.3■□□□□ 0.52
VARS2-203ENST00000428017 AKAP11Q9UKA4 1901 aa18.29■□□□□ 0.52
VARS2-203ENST00000428017 ZNF532Q9HCE3 1301 aa18.29■□□□□ 0.52
VARS2-203ENST00000428017 CLRN2A0PK11 232 aa18.29■□□□□ 0.52
VARS2-203ENST00000428017 KIF3CO14782 793 aa18.29■□□□□ 0.52
VARS2-203ENST00000428017 ANGEL2Q5VTE6 544 aaKnown RBP18.29■□□□□ 0.52
VARS2-203ENST00000428017 APOBEC3HQ6NTF7 200 aaKnown RBP18.29■□□□□ 0.52
VARS2-203ENST00000428017 ZNF384Q8TF68 577 aa18.29■□□□□ 0.52
VARS2-203ENST00000428017 ZBED3Q96IU2 234 aaPredicted RBP18.29■□□□□ 0.52
VARS2-203ENST00000428017 TDRD3Q9H7E2 651 aaKnown RBP18.29■□□□□ 0.52
VARS2-203ENST00000428017 VEZTQ9HBM0 779 aa18.29■□□□□ 0.52
VARS2-203ENST00000428017 GGA3Q9NZ52 723 aa18.29■□□□□ 0.52
VARS2-203ENST00000428017 GPR75-ASB3A0A0A6YYF3 556 aa18.28■□□□□ 0.52
VARS2-203ENST00000428017 RNF113AO15541 343 aaKnown RBP18.28■□□□□ 0.52
VARS2-203ENST00000428017 PLCG2P16885 1265 aa18.28■□□□□ 0.52
VARS2-203ENST00000428017 ADD2P35612 726 aa18.28■□□□□ 0.52
VARS2-203ENST00000428017 UBE3CQ15386 1083 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms