RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 PPP2R3BQ9Y5P8 575 aa22.93■■□□□ 1.26
PSPC1-202ENST00000427943 LAMB1P07942 1786 aa22.93■■□□□ 1.26
PSPC1-202ENST00000427943 MKRN3Q13064 507 aaKnown RBP22.92■■□□□ 1.26
PSPC1-202ENST00000427943 SPDYE2Q495Y8 402 aa22.92■■□□□ 1.26
PSPC1-202ENST00000427943 DZIP1LQ8IYY4 767 aaKnown RBP22.92■■□□□ 1.26
PSPC1-202ENST00000427943 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.92■■□□□ 1.26
PSPC1-202ENST00000427943 CEP126Q9P2H0 1117 aa22.92■■□□□ 1.26
PSPC1-202ENST00000427943 ZNF70Q9UC06 446 aaPredicted RBP22.92■■□□□ 1.26
PSPC1-202ENST00000427943 RASA3Q14644 834 aa22.91■■□□□ 1.26
PSPC1-202ENST00000427943 RNF186Q9NXI6 227 aa22.91■■□□□ 1.26
PSPC1-202ENST00000427943 TRPA1O75762 1119 aa22.9■■□□□ 1.26
PSPC1-202ENST00000427943 IL15P40933 162 aaPredicted RBP22.9■■□□□ 1.26
PSPC1-202ENST00000427943 NBPF12Q5TAG4 269 aaPredicted RBP22.9■■□□□ 1.26
PSPC1-202ENST00000427943 COPRSQ9NQ92 184 aa22.9■■□□□ 1.26
PSPC1-202ENST00000427943 SAGE1Q9NXZ1 904 aa22.9■■□□□ 1.26
PSPC1-202ENST00000427943 SRGAP3O43295 1099 aa22.89■■□□□ 1.25
PSPC1-202ENST00000427943 ZKSCAN2Q63HK3 967 aa22.89■■□□□ 1.25
PSPC1-202ENST00000427943 TCP10L2B9ZVM9 353 aa22.88■■□□□ 1.25
PSPC1-202ENST00000427943 TNFAIP1Q13829 316 aa22.88■■□□□ 1.25
PSPC1-202ENST00000427943 LDLRAD1Q5T700 205 aa22.88■■□□□ 1.25
PSPC1-202ENST00000427943 TMEM57Q8N5G2 664 aa22.88■■□□□ 1.25
PSPC1-202ENST00000427943 TEKT1Q969V4 418 aa22.88■■□□□ 1.25
PSPC1-202ENST00000427943 MYH2Q9UKX2 1941 aa22.88■■□□□ 1.25
PSPC1-202ENST00000427943 ZBED9Q6R2W3 1325 aa22.87■■□□□ 1.25
PSPC1-202ENST00000427943 MTX1Q13505 466 aa22.87■■□□□ 1.25
PSPC1-202ENST00000427943 SUPT20HL1Q3ZLR7 823 aa22.87■■□□□ 1.25
PSPC1-202ENST00000427943 ABHD8Q96I13 439 aa22.87■■□□□ 1.25
PSPC1-202ENST00000427943 AK9Q5TCS8 1911 aa22.86■■□□□ 1.25
PSPC1-202ENST00000427943 MAST3O60307 1309 aa22.86■■□□□ 1.25
PSPC1-202ENST00000427943 PPP1R12BO60237 982 aaPredicted RBP22.86■■□□□ 1.25
PSPC1-202ENST00000427943 ADORA1P30542 326 aa22.86■■□□□ 1.25
PSPC1-202ENST00000427943 PHKA1P46020 1223 aa22.86■■□□□ 1.25
PSPC1-202ENST00000427943 CACNB3P54284 484 aa22.86■■□□□ 1.25
PSPC1-202ENST00000427943 HDLBPQ00341 1268 aaKnown RBP22.86■■□□□ 1.25
PSPC1-202ENST00000427943 MAP3K11Q16584 847 aa22.86■■□□□ 1.25
PSPC1-202ENST00000427943 CDAN1Q8IWY9 1227 aa22.86■■□□□ 1.25
PSPC1-202ENST00000427943 REM2Q8IYK8 340 aaPredicted RBP22.86■■□□□ 1.25
PSPC1-202ENST00000427943 CLMNQ96JQ2 1002 aa22.86■■□□□ 1.25
PSPC1-202ENST00000427943 GNAI2P04899 355 aa22.85■■□□□ 1.25
PSPC1-202ENST00000427943 WDR66Q8TBY9 1149 aa22.85■■□□□ 1.25
PSPC1-202ENST00000427943 TMEM39BQ9GZU3 492 aa22.85■■□□□ 1.25
PSPC1-202ENST00000427943 SPRYD7Q5W111 196 aa22.84■■□□□ 1.25
PSPC1-202ENST00000427943 ZDHHC15Q96MV8 337 aa22.84■■□□□ 1.25
PSPC1-202ENST00000427943 SUGT1Q9Y2Z0 365 aa22.84■■□□□ 1.25
PSPC1-202ENST00000427943 PNMA6EA0A0J9YXQ4 647 aa22.83■■□□□ 1.25
PSPC1-202ENST00000427943 USP2O75604 605 aaPredicted RBP22.83■■□□□ 1.25
PSPC1-202ENST00000427943 PRDX5P30044 214 aa22.83■■□□□ 1.25
PSPC1-202ENST00000427943 TNNI2P48788 182 aa22.83■■□□□ 1.25
PSPC1-202ENST00000427943 TFCP2Q12800 502 aa22.83■■□□□ 1.25
PSPC1-202ENST00000427943 SLC10A4Q96EP9 437 aa22.83■■□□□ 1.25
PSPC1-202ENST00000427943 TEPSINQ96N21 525 aa22.83■■□□□ 1.25
PSPC1-202ENST00000427943 GNL3LQ9NVN8 582 aaKnown RBP22.83■■□□□ 1.25
PSPC1-202ENST00000427943 IREB2P48200 963 aaKnown RBP22.82■■□□□ 1.24
PSPC1-202ENST00000427943 TIMM10P62072 90 aa22.82■■□□□ 1.24
PSPC1-202ENST00000427943 DGKZQ13574 1117 aa22.82■■□□□ 1.24
PSPC1-202ENST00000427943 CCDC102BQ68D86 513 aa22.82■■□□□ 1.24
PSPC1-202ENST00000427943 MCOLN1Q9GZU1 580 aa22.82■■□□□ 1.24
PSPC1-202ENST00000427943 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.82■■□□□ 1.24
PSPC1-202ENST00000427943 A0A1B0GUL7 405 aa22.81■■□□□ 1.24
PSPC1-202ENST00000427943 SREBF2Q12772 1141 aa22.81■■□□□ 1.24
PSPC1-202ENST00000427943 DIXDC1Q155Q3 683 aa22.81■■□□□ 1.24
PSPC1-202ENST00000427943 APOBEC3HQ6NTF7 200 aaKnown RBP22.81■■□□□ 1.24
PSPC1-202ENST00000427943 FTSJ3Q8IY81 847 aaKnown RBP22.81■■□□□ 1.24
PSPC1-202ENST00000427943 WNK4Q96J92 1243 aa22.81■■□□□ 1.24
PSPC1-202ENST00000427943 TMOD2Q9NZR1 351 aa22.81■■□□□ 1.24
PSPC1-202ENST00000427943 TBC1D8O95759 1140 aa22.8■■□□□ 1.24
PSPC1-202ENST00000427943 TM4SF4P48230 202 aa22.8■■□□□ 1.24
PSPC1-202ENST00000427943 HHIPL2Q6UWX4 724 aa22.8■■□□□ 1.24
PSPC1-202ENST00000427943 MRIQ9BWK5 157 aa22.8■■□□□ 1.24
PSPC1-202ENST00000427943 DENND2AQ9ULE3 1009 aa22.8■■□□□ 1.24
PSPC1-202ENST00000427943 SEMA3EO15041 775 aa22.79■■□□□ 1.24
PSPC1-202ENST00000427943 LDHBP07195 334 aaKnown RBP22.79■■□□□ 1.24
PSPC1-202ENST00000427943 RLBP1P12271 317 aa22.79■■□□□ 1.24
PSPC1-202ENST00000427943 ITPRIPQ8IWB1 547 aa22.79■■□□□ 1.24
PSPC1-202ENST00000427943 ANKRD13AQ8IZ07 590 aa22.79■■□□□ 1.24
PSPC1-202ENST00000427943 C1orf115Q9H7X2 142 aa22.79■■□□□ 1.24
PSPC1-202ENST00000427943 AKAP2Q9Y2D5 859 aa22.79■■□□□ 1.24
PSPC1-202ENST00000427943 DAGLAQ9Y4D2 1042 aa22.79■■□□□ 1.24
PSPC1-202ENST00000427943 DOCK2Q92608 1830 aa22.79■■□□□ 1.24
PSPC1-202ENST00000427943 RASGRF1Q13972 1273 aa22.78■■□□□ 1.24
PSPC1-202ENST00000427943 XAGE2Q96GT9 111 aa22.78■■□□□ 1.24
PSPC1-202ENST00000427943 SALL1Q9NSC2 1324 aa22.78■■□□□ 1.24
PSPC1-202ENST00000427943 ZBTB48P10074 688 aaPredicted RBP22.77■■□□□ 1.24
PSPC1-202ENST00000427943 GJA5P36382 358 aa22.77■■□□□ 1.24
PSPC1-202ENST00000427943 NEUROD6Q96NK8 337 aa22.77■■□□□ 1.24
PSPC1-202ENST00000427943 ELP3Q9H9T3 547 aa22.77■■□□□ 1.24
PSPC1-202ENST00000427943 MANSC4A6NHS7 340 aaPredicted RBP22.76■■□□□ 1.23
PSPC1-202ENST00000427943 UNCXA6NJT0 531 aa22.76■■□□□ 1.23
PSPC1-202ENST00000427943 FAM83AQ86UY5 434 aa22.76■■□□□ 1.23
PSPC1-202ENST00000427943 CCDC85CA6NKD9 419 aa22.75■■□□□ 1.23
PSPC1-202ENST00000427943 G3BP1Q13283 466 aaKnown RBP eCLIP22.75■■□□□ 1.23
PSPC1-202ENST00000427943 MVPQ14764 893 aaKnown RBP22.75■■□□□ 1.23
PSPC1-202ENST00000427943 RPAP1Q9BWH6 1393 aaPredicted RBP22.75■■□□□ 1.23
PSPC1-202ENST00000427943 POLA2Q14181 598 aa22.74■■□□□ 1.23
PSPC1-202ENST00000427943 FKBP1CQ5VVH2 108 aa22.74■■□□□ 1.23
PSPC1-202ENST00000427943 CDC42EP5Q6NZY7 148 aa22.74■■□□□ 1.23
PSPC1-202ENST00000427943 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.74■■□□□ 1.23
PSPC1-202ENST00000427943 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.74■■□□□ 1.23
PSPC1-202ENST00000427943 OPTNQ96CV9 577 aa22.74■■□□□ 1.23
PSPC1-202ENST00000427943 ABCF2Q9UG63 623 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms