RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 TCOF1Q13428 1488 aaKnown RBP14.91□□□□□ -0.02
SPG11-202ENST00000427534 SCNN1DP51172 638 aa14.91□□□□□ -0.02
SPG11-202ENST00000427534 USP48Q86UV5 1035 aa14.91□□□□□ -0.02
SPG11-202ENST00000427534 MAPKAPK5Q8IW41 473 aa14.91□□□□□ -0.02
SPG11-202ENST00000427534 FERMT1Q9BQL6 677 aa14.91□□□□□ -0.02
SPG11-202ENST00000427534 TAOK3Q9H2K8 898 aa14.91□□□□□ -0.02
SPG11-202ENST00000427534 ZNF518AQ6AHZ1 1483 aa14.91□□□□□ -0.02
SPG11-202ENST00000427534 CCT6AP40227 531 aaKnown RBP14.91□□□□□ -0.02
SPG11-202ENST00000427534 SNW1Q13573 536 aaKnown RBP14.91□□□□□ -0.02
SPG11-202ENST00000427534 DNAJC21Q5F1R6 531 aaKnown RBP14.91□□□□□ -0.02
SPG11-202ENST00000427534 NCAPH2Q6IBW4 605 aa14.91□□□□□ -0.02
SPG11-202ENST00000427534 EYA1Q99502 592 aa14.91□□□□□ -0.02
SPG11-202ENST00000427534 ATP8B2P98198 1209 aa14.9□□□□□ -0.02
SPG11-202ENST00000427534 UBXN1Q04323 297 aa14.9□□□□□ -0.02
SPG11-202ENST00000427534 G2E3Q7L622 706 aa14.9□□□□□ -0.02
SPG11-202ENST00000427534 PHACTR3Q96KR7 559 aa14.9□□□□□ -0.02
SPG11-202ENST00000427534 EYA3Q99504 573 aa14.9□□□□□ -0.02
SPG11-202ENST00000427534 LGR6Q9HBX8 967 aa14.9□□□□□ -0.02
SPG11-202ENST00000427534 ALDH1L1O75891 902 aa14.9□□□□□ -0.02
SPG11-202ENST00000427534 RNF113AO15541 343 aaKnown RBP14.9□□□□□ -0.02
SPG11-202ENST00000427534 KRT19P08727 400 aa14.9□□□□□ -0.02
SPG11-202ENST00000427534 GABPAQ06546 454 aa14.9□□□□□ -0.02
SPG11-202ENST00000427534 CMTR1Q8N1G2 835 aaKnown RBP14.9□□□□□ -0.02
SPG11-202ENST00000427534 RNMTO43148 476 aaKnown RBP14.9□□□□□ -0.02
SPG11-202ENST00000427534 IL15P40933 162 aaPredicted RBP14.9□□□□□ -0.02
SPG11-202ENST00000427534 HAUS7Q99871 368 aa14.9□□□□□ -0.02
SPG11-202ENST00000427534 GGA1Q9UJY5 639 aa14.9□□□□□ -0.02
SPG11-202ENST00000427534 IVNS1ABPQ9Y6Y0 642 aa14.9□□□□□ -0.02
SPG11-202ENST00000427534 TGFBRAP1Q8WUH2 860 aa14.89□□□□□ -0.03
SPG11-202ENST00000427534 PPP1R9BQ96SB3 815 aa14.89□□□□□ -0.03
SPG11-202ENST00000427534 NACA2Q9H009 215 aa14.89□□□□□ -0.03
SPG11-202ENST00000427534 ITSN2Q9NZM3 1697 aa14.89□□□□□ -0.03
SPG11-202ENST00000427534 NSMFQ6X4W1 530 aa14.89□□□□□ -0.03
SPG11-202ENST00000427534 GADL1Q6ZQY3 521 aa14.89□□□□□ -0.03
SPG11-202ENST00000427534 SELENOSQ9BQE4 189 aa14.89□□□□□ -0.03
SPG11-202ENST00000427534 FAM47AQ5JRC9 791 aa14.89□□□□□ -0.03
SPG11-202ENST00000427534 DDX23Q9BUQ8 820 aaKnown RBP14.89□□□□□ -0.03
SPG11-202ENST00000427534 CTNND2Q9UQB3 1225 aa14.89□□□□□ -0.03
SPG11-202ENST00000427534 KIF2AO00139 706 aaPredicted RBP14.89□□□□□ -0.03
SPG11-202ENST00000427534 GTF2F1P35269 517 aaKnown RBP eCLIP14.89□□□□□ -0.03
SPG11-202ENST00000427534 SMCR8Q8TEV9 937 aaPredicted RBP14.89□□□□□ -0.03
SPG11-202ENST00000427534 PLEKHA4Q9H4M7 779 aa14.89□□□□□ -0.03
SPG11-202ENST00000427534 HOXC9P31274 260 aa14.89□□□□□ -0.03
SPG11-202ENST00000427534 KRT79Q5XKE5 535 aa14.89□□□□□ -0.03
SPG11-202ENST00000427534 KSR1Q8IVT5 923 aa14.89□□□□□ -0.03
SPG11-202ENST00000427534 PIK3AP1Q6ZUJ8 805 aa14.89□□□□□ -0.03
SPG11-202ENST00000427534 CNNM2Q9H8M5 875 aa14.89□□□□□ -0.03
SPG11-202ENST00000427534 HIBADHP31937 336 aaKnown RBP14.88□□□□□ -0.03
SPG11-202ENST00000427534 PPIP5K2O43314 1243 aa14.88□□□□□ -0.03
SPG11-202ENST00000427534 GIGYF2Q6Y7W6 1299 aaKnown RBP14.88□□□□□ -0.03
SPG11-202ENST00000427534 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.88□□□□□ -0.03
SPG11-202ENST00000427534 CALML3P27482 149 aa14.88□□□□□ -0.03
SPG11-202ENST00000427534 TBC1D10BQ4KMP7 808 aaPredicted RBP14.88□□□□□ -0.03
SPG11-202ENST00000427534 NOP9Q86U38 636 aaKnown RBP14.88□□□□□ -0.03
SPG11-202ENST00000427534 FRMPD2Q68DX3 1309 aaPredicted RBP14.88□□□□□ -0.03
SPG11-202ENST00000427534 TXKP42681 527 aa14.88□□□□□ -0.03
SPG11-202ENST00000427534 LONRF3Q496Y0 759 aa14.88□□□□□ -0.03
SPG11-202ENST00000427534 METTL13Q8N6R0 699 aa14.88□□□□□ -0.03
SPG11-202ENST00000427534 ESYT1Q9BSJ8 1104 aa14.88□□□□□ -0.03
SPG11-202ENST00000427534 CFAP65Q6ZU64 1925 aaKnown RBP14.88□□□□□ -0.03
SPG11-202ENST00000427534 ZSCAN22P10073 491 aaPredicted RBP14.87□□□□□ -0.03
SPG11-202ENST00000427534 NCOA5Q9HCD5 579 aaKnown RBP14.87□□□□□ -0.03
SPG11-202ENST00000427534 LZTFL1Q9NQ48 299 aa14.87□□□□□ -0.03
SPG11-202ENST00000427534 PCDH11XQ9BZA7 1347 aa14.87□□□□□ -0.03
SPG11-202ENST00000427534 PCDH11YQ9BZA8 1340 aa14.87□□□□□ -0.03
SPG11-202ENST00000427534 ZSCAN23Q3MJ62 389 aa14.87□□□□□ -0.03
SPG11-202ENST00000427534 IFT81Q8WYA0 676 aa14.87□□□□□ -0.03
SPG11-202ENST00000427534 CARD14Q9BXL6 1004 aa14.87□□□□□ -0.03
SPG11-202ENST00000427534 MAP9Q49MG5 647 aa14.87□□□□□ -0.03
SPG11-202ENST00000427534 GIMAP7Q8NHV1 300 aa14.87□□□□□ -0.03
SPG11-202ENST00000427534 RAB3IL1Q8TBN0 382 aa14.87□□□□□ -0.03
SPG11-202ENST00000427534 MAK16Q9BXY0 300 aaKnown RBP14.87□□□□□ -0.03
SPG11-202ENST00000427534 CCDC175P0C221 793 aa14.87□□□□□ -0.03
SPG11-202ENST00000427534 BIRC2Q13490 618 aa14.87□□□□□ -0.03
SPG11-202ENST00000427534 OTUD7BQ6GQQ9 843 aa14.87□□□□□ -0.03
SPG11-202ENST00000427534 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.87□□□□□ -0.03
SPG11-202ENST00000427534 TMCO4Q5TGY1 634 aa14.87□□□□□ -0.03
SPG11-202ENST00000427534 PPANQ9NQ55 473 aaKnown RBP14.87□□□□□ -0.03
SPG11-202ENST00000427534 CFBP00751 764 aa14.87□□□□□ -0.03
SPG11-202ENST00000427534 Q3C1V9 767 aa14.87□□□□□ -0.03
SPG11-202ENST00000427534 IQCGQ9H095 443 aaKnown RBP14.87□□□□□ -0.03
SPG11-202ENST00000427534 GUCA1BQ9UMX6 200 aa14.87□□□□□ -0.03
SPG11-202ENST00000427534 NPATQ14207 1427 aa14.86□□□□□ -0.03
SPG11-202ENST00000427534 HGSO14964 777 aaPredicted RBP14.86□□□□□ -0.03
SPG11-202ENST00000427534 VAMP4O75379 141 aa14.86□□□□□ -0.03
SPG11-202ENST00000427534 KLHL40Q2TBA0 621 aa14.86□□□□□ -0.03
SPG11-202ENST00000427534 DACT1Q9NYF0 836 aa14.86□□□□□ -0.03
SPG11-202ENST00000427534 FLT4P35916 1363 aa14.86□□□□□ -0.03
SPG11-202ENST00000427534 SESTD1Q86VW0 696 aa14.86□□□□□ -0.03
SPG11-202ENST00000427534 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.86□□□□□ -0.03
SPG11-202ENST00000427534 RDH13Q8NBN7 331 aa14.86□□□□□ -0.03
SPG11-202ENST00000427534 JAKMIP2Q96AA8 810 aa14.86□□□□□ -0.03
SPG11-202ENST00000427534 RMND1Q9NWS8 449 aa14.86□□□□□ -0.03
SPG11-202ENST00000427534 UBE2HP62256 183 aa14.86□□□□□ -0.03
SPG11-202ENST00000427534 C19orf44Q9H6X5 657 aa14.86□□□□□ -0.03
SPG11-202ENST00000427534 AGTPBP1Q9UPW5 1226 aa14.86□□□□□ -0.03
SPG11-202ENST00000427534 USTQ9Y2C2 406 aa14.86□□□□□ -0.03
SPG11-202ENST00000427534 RTL1A6NKG5 1358 aa14.85□□□□□ -0.03
SPG11-202ENST00000427534 A0A1B0GUL7 405 aa14.85□□□□□ -0.03
SPG11-202ENST00000427534 AK2P54819 239 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms