RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 RBM5P52756 815 aaKnown RBP eCLIP30.82■■■□□ 2.52
HERPUD2-205ENST00000427455 KRT26Q7Z3Y9 468 aa30.82■■■□□ 2.52
HERPUD2-205ENST00000427455 LDHBP07195 334 aaKnown RBP30.81■■■□□ 2.52
HERPUD2-205ENST00000427455 IFIT2P09913 472 aaKnown RBP30.81■■■□□ 2.52
HERPUD2-205ENST00000427455 PRDX5P30044 214 aa30.81■■■□□ 2.52
HERPUD2-205ENST00000427455 CRKP46108 304 aa30.81■■■□□ 2.52
HERPUD2-205ENST00000427455 PI16Q6UXB8 463 aa30.81■■■□□ 2.52
HERPUD2-205ENST00000427455 SULF1Q8IWU6 871 aa30.81■■■□□ 2.52
HERPUD2-205ENST00000427455 HDAC1Q13547 482 aaPredicted RBP30.8■■■□□ 2.52
HERPUD2-205ENST00000427455 TEKT1Q969V4 418 aa30.8■■■□□ 2.52
HERPUD2-205ENST00000427455 MRIQ9BWK5 157 aa30.8■■■□□ 2.52
HERPUD2-205ENST00000427455 PCDHAC2Q9Y5I4 1007 aa30.8■■■□□ 2.52
HERPUD2-205ENST00000427455 AKAP11Q9UKA4 1901 aa30.8■■■□□ 2.52
HERPUD2-205ENST00000427455 POLR2AP24928 1970 aaKnown RBP30.79■■■□□ 2.52
HERPUD2-205ENST00000427455 TRAF5O00463 557 aa30.79■■■□□ 2.52
HERPUD2-205ENST00000427455 MYO1BO43795 1136 aa30.79■■■□□ 2.52
HERPUD2-205ENST00000427455 USP48Q86UV5 1035 aa30.79■■■□□ 2.52
HERPUD2-205ENST00000427455 ABCF2Q9UG63 623 aa30.79■■■□□ 2.52
HERPUD2-205ENST00000427455 TRPM7Q96QT4 1865 aa30.78■■■□□ 2.52
HERPUD2-205ENST00000427455 ADM5C9JUS6 153 aa30.78■■■□□ 2.52
HERPUD2-205ENST00000427455 IRX6P78412 446 aaPredicted RBP30.78■■■□□ 2.52
HERPUD2-205ENST00000427455 SPTY2D1Q68D10 685 aaPredicted RBP30.78■■■□□ 2.52
HERPUD2-205ENST00000427455 PRMT6Q96LA8 375 aaPredicted RBP30.78■■■□□ 2.52
HERPUD2-205ENST00000427455 BCL11AQ9H165 835 aa30.77■■■□□ 2.52
HERPUD2-205ENST00000427455 HHIPL2Q6UWX4 724 aa30.76■■■□□ 2.51
HERPUD2-205ENST00000427455 APOBEC3FQ8IUX4 373 aaKnown RBP30.76■■■□□ 2.51
HERPUD2-205ENST00000427455 ZDHHC15Q96MV8 337 aa30.76■■■□□ 2.51
HERPUD2-205ENST00000427455 SMARCA5O60264 1052 aaPredicted RBP30.75■■■□□ 2.51
HERPUD2-205ENST00000427455 FMR1Q06787 632 aaKnown RBP eCLIP30.75■■■□□ 2.51
HERPUD2-205ENST00000427455 SNRKQ9NRH2 765 aa30.75■■■□□ 2.51
HERPUD2-205ENST00000427455 ERICH6Q7L0X2 663 aa30.74■■■□□ 2.51
HERPUD2-205ENST00000427455 DZIP1Q86YF9 867 aaKnown RBP30.74■■■□□ 2.51
HERPUD2-205ENST00000427455 CREBZFQ9NS37 354 aa30.74■■■□□ 2.51
HERPUD2-205ENST00000427455 MAST2Q6P0Q8 1798 aa30.74■■■□□ 2.51
HERPUD2-205ENST00000427455 AOX1Q06278 1338 aa30.73■■■□□ 2.51
HERPUD2-205ENST00000427455 TMEM88BA6NKF7 163 aa30.73■■■□□ 2.51
HERPUD2-205ENST00000427455 DIXDC1Q155Q3 683 aa30.73■■■□□ 2.51
HERPUD2-205ENST00000427455 GCC1Q96CN9 775 aa30.73■■■□□ 2.51
HERPUD2-205ENST00000427455 CLRN2A0PK11 232 aa30.72■■■□□ 2.51
HERPUD2-205ENST00000427455 SPDYE2Q495Y8 402 aa30.72■■■□□ 2.51
HERPUD2-205ENST00000427455 TBC1D9Q6ZT07 1266 aa30.72■■■□□ 2.51
HERPUD2-205ENST00000427455 ZAP70P43403 619 aa30.71■■■□□ 2.51
HERPUD2-205ENST00000427455 SLF2Q8IX21 1173 aa30.71■■■□□ 2.51
HERPUD2-205ENST00000427455 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.71■■■□□ 2.51
HERPUD2-205ENST00000427455 RWDD1Q9H446 243 aaPredicted RBP30.71■■■□□ 2.51
HERPUD2-205ENST00000427455 VEZTQ9HBM0 779 aa30.71■■■□□ 2.51
HERPUD2-205ENST00000427455 DAGLAQ9Y4D2 1042 aa30.71■■■□□ 2.51
HERPUD2-205ENST00000427455 MYH2Q9UKX2 1941 aa30.71■■■□□ 2.51
HERPUD2-205ENST00000427455 CELF2O95319 508 aaKnown RBP30.7■■■□□ 2.51
HERPUD2-205ENST00000427455 CYP2E1P05181 493 aaPredicted RBP30.7■■■□□ 2.51
HERPUD2-205ENST00000427455 APOBEC3HQ6NTF7 200 aaKnown RBP30.7■■■□□ 2.51
HERPUD2-205ENST00000427455 DLK2Q6UY11 383 aa30.7■■■□□ 2.51
HERPUD2-205ENST00000427455 TDRD3Q9H7E2 651 aaKnown RBP30.7■■■□□ 2.51
HERPUD2-205ENST00000427455 LRP2BPQ9P2M1 347 aa30.7■■■□□ 2.51
HERPUD2-205ENST00000427455 ZNF70Q9UC06 446 aaPredicted RBP30.7■■■□□ 2.51
HERPUD2-205ENST00000427455 SCAF8Q9UPN6 1271 aaKnown RBP30.7■■■□□ 2.51
HERPUD2-205ENST00000427455 MECOMQ03112 1051 aa30.69■■■□□ 2.5
HERPUD2-205ENST00000427455 CDCA5Q96FF9 252 aa30.69■■■□□ 2.5
HERPUD2-205ENST00000427455 ZNF408Q9H9D4 720 aa30.69■■■□□ 2.5
HERPUD2-205ENST00000427455 RAI14Q9P0K7 980 aa30.69■■■□□ 2.5
HERPUD2-205ENST00000427455 GAKO14976 1311 aa30.69■■■□□ 2.5
HERPUD2-205ENST00000427455 CEP350Q5VT06 3117 aa30.68■■■□□ 2.5
HERPUD2-205ENST00000427455 HTRA3P83110 453 aa30.68■■■□□ 2.5
HERPUD2-205ENST00000427455 CST9Q5W186 159 aa30.68■■■□□ 2.5
HERPUD2-205ENST00000427455 IGSF3O75054 1194 aa30.67■■■□□ 2.5
HERPUD2-205ENST00000427455 GSTO1P78417 241 aa30.67■■■□□ 2.5
HERPUD2-205ENST00000427455 TNFAIP1Q13829 316 aa30.67■■■□□ 2.5
HERPUD2-205ENST00000427455 NSUN4Q96CB9 384 aaKnown RBP30.67■■■□□ 2.5
HERPUD2-205ENST00000427455 PPP2R3BQ9Y5P8 575 aa30.67■■■□□ 2.5
HERPUD2-205ENST00000427455 DOCK2Q92608 1830 aa30.66■■■□□ 2.5
HERPUD2-205ENST00000427455 FAM163AQ96GL9 167 aaPredicted RBP30.66■■■□□ 2.5
HERPUD2-205ENST00000427455 DEFB129Q9H1M3 183 aa30.66■■■□□ 2.5
HERPUD2-205ENST00000427455 TMOD2Q9NZR1 351 aa30.66■■■□□ 2.5
HERPUD2-205ENST00000427455 ZBTB47Q9UFB7 747 aaPredicted RBP30.66■■■□□ 2.5
HERPUD2-205ENST00000427455 MROH7-TTC4A0A0A0MT08 1334 aa30.66■■■□□ 2.5
HERPUD2-205ENST00000427455 ATP5JP18859 108 aa30.65■■■□□ 2.5
HERPUD2-205ENST00000427455 ZNF384Q8TF68 577 aa30.65■■■□□ 2.5
HERPUD2-205ENST00000427455 GPATCH3Q96I76 525 aa30.65■■■□□ 2.5
HERPUD2-205ENST00000427455 PIH1D3Q9NQM4 214 aaKnown RBP30.65■■■□□ 2.5
HERPUD2-205ENST00000427455 NDUFB9Q9Y6M9 179 aa30.65■■■□□ 2.5
HERPUD2-205ENST00000427455 MYO5AQ9Y4I1 1855 aaKnown RBP30.64■■■□□ 2.5
HERPUD2-205ENST00000427455 SMC5Q8IY18 1101 aa30.64■■■□□ 2.5
HERPUD2-205ENST00000427455 ANKRD45Q5TZF3 282 aa30.63■■■□□ 2.49
HERPUD2-205ENST00000427455 ECHDC1Q9NTX5 307 aa30.63■■■□□ 2.49
HERPUD2-205ENST00000427455 IGHDP01880 384 aa30.62■■■□□ 2.49
HERPUD2-205ENST00000427455 LDHCP07864 332 aa30.62■■■□□ 2.49
HERPUD2-205ENST00000427455 TNNI2P48788 182 aa30.62■■■□□ 2.49
HERPUD2-205ENST00000427455 TTF1Q15361 905 aaPredicted RBP30.62■■■□□ 2.49
HERPUD2-205ENST00000427455 FKBP1CQ5VVH2 108 aa30.62■■■□□ 2.49
HERPUD2-205ENST00000427455 DNAJC2Q99543 621 aaKnown RBP30.62■■■□□ 2.49
HERPUD2-205ENST00000427455 ABT1Q9ULW3 272 aaKnown RBP30.62■■■□□ 2.49
HERPUD2-205ENST00000427455 TCP10L2B9ZVM9 353 aa30.61■■■□□ 2.49
HERPUD2-205ENST00000427455 RASA3Q14644 834 aa30.61■■■□□ 2.49
HERPUD2-205ENST00000427455 PRAMEF18Q5VWM3 479 aa30.61■■■□□ 2.49
HERPUD2-205ENST00000427455 NAA16Q6N069 864 aaPredicted RBP30.61■■■□□ 2.49
HERPUD2-205ENST00000427455 CDC42EP5Q6NZY7 148 aa30.61■■■□□ 2.49
HERPUD2-205ENST00000427455 BOLA2Q9H3K6 86 aa30.61■■■□□ 2.49
HERPUD2-205ENST00000427455 ANTXR1Q9H6X2 564 aa30.61■■■□□ 2.49
HERPUD2-205ENST00000427455 GBA2Q9HCG7 927 aaPredicted RBP30.61■■■□□ 2.49
HERPUD2-205ENST00000427455 TLL2Q9Y6L7 1015 aa30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms