RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 GYG1P46976 350 aa18.59■□□□□ 0.57
PDAP1-202ENST00000426447 CCDC27Q2M243 656 aa18.59■□□□□ 0.57
PDAP1-202ENST00000426447 FAM43AQ8N2R8 423 aa18.59■□□□□ 0.57
PDAP1-202ENST00000426447 TDRD7Q8NHU6 1098 aaKnown RBP18.59■□□□□ 0.57
PDAP1-202ENST00000426447 TEPSINQ96N21 525 aa18.59■□□□□ 0.57
PDAP1-202ENST00000426447 F6X3S4 739 aa18.58■□□□□ 0.56
PDAP1-202ENST00000426447 CRKP46108 304 aa18.58■□□□□ 0.56
PDAP1-202ENST00000426447 CDAN1Q8IWY9 1227 aa18.58■□□□□ 0.56
PDAP1-202ENST00000426447 CETPP11597 493 aa18.57■□□□□ 0.56
PDAP1-202ENST00000426447 UBE4AQ14139 1066 aa18.57■□□□□ 0.56
PDAP1-202ENST00000426447 BEND3Q5T5X7 828 aa18.57■□□□□ 0.56
PDAP1-202ENST00000426447 VPS37DQ86XT2 251 aa18.57■□□□□ 0.56
PDAP1-202ENST00000426447 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.57■□□□□ 0.563e-12■□□□□ 10.8
PDAP1-202ENST00000426447 SH3TC2Q8TF17 1288 aa18.57■□□□□ 0.56
PDAP1-202ENST00000426447 C9orf78Q9NZ63 289 aaPredicted RBP18.57■□□□□ 0.56
PDAP1-202ENST00000426447 IL16Q14005 1332 aa18.56■□□□□ 0.56
PDAP1-202ENST00000426447 H0YGN5 161 aa18.56■□□□□ 0.56
PDAP1-202ENST00000426447 TLR2O60603 784 aa18.56■□□□□ 0.56
PDAP1-202ENST00000426447 FRAT2O75474 233 aaPredicted RBP18.56■□□□□ 0.56
PDAP1-202ENST00000426447 EPHA10Q5JZY3 1008 aa18.56■□□□□ 0.56
PDAP1-202ENST00000426447 FAM84BQ96KN1 310 aaPredicted RBP18.56■□□□□ 0.56
PDAP1-202ENST00000426447 ECM29Q5VYK3 1845 aa18.56■□□□□ 0.56
PDAP1-202ENST00000426447 GRM8O00222 908 aa18.55■□□□□ 0.56
PDAP1-202ENST00000426447 VAMP4O75379 141 aa18.55■□□□□ 0.56
PDAP1-202ENST00000426447 ECM2O94769 699 aaPredicted RBP18.55■□□□□ 0.56
PDAP1-202ENST00000426447 ERO1BQ86YB8 467 aa18.55■□□□□ 0.56
PDAP1-202ENST00000426447 ARHGAP39Q9C0H5 1083 aa18.55■□□□□ 0.56
PDAP1-202ENST00000426447 RBBP6Q7Z6E9 1792 aaKnown RBP18.55■□□□□ 0.56
PDAP1-202ENST00000426447 SPDYE5A6NIY4 337 aa18.54■□□□□ 0.56
PDAP1-202ENST00000426447 GNRH1P01148 92 aa18.54■□□□□ 0.56
PDAP1-202ENST00000426447 LACTBP83111 547 aaPredicted RBP18.54■□□□□ 0.56
PDAP1-202ENST00000426447 CHAF1AQ13111 956 aaPredicted RBP18.54■□□□□ 0.56
PDAP1-202ENST00000426447 SNAPC2Q13487 334 aa18.54■□□□□ 0.56
PDAP1-202ENST00000426447 DPF3Q92784 378 aa18.54■□□□□ 0.56
PDAP1-202ENST00000426447 HOOK2Q96ED9 719 aa18.54■□□□□ 0.56
PDAP1-202ENST00000426447 WRNIP1Q96S55 665 aa18.54■□□□□ 0.56
PDAP1-202ENST00000426447 TMOD2Q9NZR1 351 aa18.54■□□□□ 0.56
PDAP1-202ENST00000426447 IQSEC3Q9UPP2 1182 aaPredicted RBP18.54■□□□□ 0.56
PDAP1-202ENST00000426447 MKI67P46013 3256 aaKnown RBP18.54■□□□□ 0.56
PDAP1-202ENST00000426447 KIAA0100Q14667 2235 aaKnown RBP18.54■□□□□ 0.56
PDAP1-202ENST00000426447 HTTP42858 3142 aa18.53■□□□□ 0.56
PDAP1-202ENST00000426447 BTBD19C9JJ37 291 aa18.53■□□□□ 0.56
PDAP1-202ENST00000426447 CACNB3P54284 484 aa18.53■□□□□ 0.56
PDAP1-202ENST00000426447 PRMT2P55345 433 aa18.53■□□□□ 0.56
PDAP1-202ENST00000426447 ZKSCAN4Q969J2 545 aaPredicted RBP18.53■□□□□ 0.56
PDAP1-202ENST00000426447 TEKT1Q969V4 418 aa18.53■□□□□ 0.56
PDAP1-202ENST00000426447 ZCCHC17Q9NP64 241 aaKnown RBP18.53■□□□□ 0.56
PDAP1-202ENST00000426447 LAMB1P07942 1786 aa18.53■□□□□ 0.56
PDAP1-202ENST00000426447 FANCIQ9NVI1 1328 aa18.52■□□□□ 0.56
PDAP1-202ENST00000426447 IRF6O14896 467 aa18.52■□□□□ 0.56
PDAP1-202ENST00000426447 EXOSC9Q06265 439 aaKnown RBP18.52■□□□□ 0.56
PDAP1-202ENST00000426447 CAVIN4Q5BKX8 364 aa18.52■□□□□ 0.56
PDAP1-202ENST00000426447 TBC1D22AQ8WUA7 517 aa18.52■□□□□ 0.56
PDAP1-202ENST00000426447 PUS3Q9BZE2 481 aaKnown RBP18.52■□□□□ 0.56
PDAP1-202ENST00000426447 SALL2Q9Y467 1007 aaPredicted RBP18.52■□□□□ 0.56
PDAP1-202ENST00000426447 SNCAIPQ9Y6H5 919 aa18.52■□□□□ 0.56
PDAP1-202ENST00000426447 HDLBPQ00341 1268 aaKnown RBP18.51■□□□□ 0.55
PDAP1-202ENST00000426447 GRIK5Q16478 980 aa18.51■□□□□ 0.55
PDAP1-202ENST00000426447 SLC4A10Q6U841 1118 aa18.51■□□□□ 0.55
PDAP1-202ENST00000426447 CHRDL2Q6WN34 429 aa18.51■□□□□ 0.55
PDAP1-202ENST00000426447 CENPFP49454 3210 aa18.51■□□□□ 0.55
PDAP1-202ENST00000426447 MROH5Q6ZUA9 1318 aa18.5■□□□□ 0.55
PDAP1-202ENST00000426447 HOXD10P28358 340 aa18.5■□□□□ 0.55
PDAP1-202ENST00000426447 DCAF15Q66K64 600 aa18.5■□□□□ 0.55
PDAP1-202ENST00000426447 FBXO33Q7Z6M2 555 aa18.5■□□□□ 0.55
PDAP1-202ENST00000426447 ALDH1L1O75891 902 aa18.49■□□□□ 0.55
PDAP1-202ENST00000426447 FMNL1O95466 1100 aaPredicted RBP18.49■□□□□ 0.55
PDAP1-202ENST00000426447 PSMC4P43686 418 aa18.49■□□□□ 0.55
PDAP1-202ENST00000426447 PPIL2Q13356 520 aa18.49■□□□□ 0.55
PDAP1-202ENST00000426447 FAM83AQ86UY5 434 aa18.49■□□□□ 0.55
PDAP1-202ENST00000426447 NKX2-3Q8TAU0 364 aa18.49■□□□□ 0.55
PDAP1-202ENST00000426447 RAET1EQ8TD07 263 aa18.49■□□□□ 0.55
PDAP1-202ENST00000426447 SRCIN1Q9C0H9 1055 aa18.49■□□□□ 0.55
PDAP1-202ENST00000426447 BIN2Q9UBW5 565 aaPredicted RBP18.49■□□□□ 0.55
PDAP1-202ENST00000426447 CPA4Q9UI42 421 aa18.49■□□□□ 0.55
PDAP1-202ENST00000426447 OTOFQ9HC10 1997 aa18.48■□□□□ 0.55
PDAP1-202ENST00000426447 PPATQ06203 517 aa18.48■□□□□ 0.55
PDAP1-202ENST00000426447 MTFR1Q15390 333 aa18.48■□□□□ 0.55
PDAP1-202ENST00000426447 CCDC184Q52MB2 194 aa18.48■□□□□ 0.55
PDAP1-202ENST00000426447 METTL24Q5JXM2 366 aa18.48■□□□□ 0.55
PDAP1-202ENST00000426447 C17orf99Q6UX52 265 aa18.48■□□□□ 0.55
PDAP1-202ENST00000426447 MIGA2Q7L4E1 593 aa18.48■□□□□ 0.55
PDAP1-202ENST00000426447 WDR63Q8IWG1 891 aa18.48■□□□□ 0.55
PDAP1-202ENST00000426447 ZDHHC15Q96MV8 337 aa18.48■□□□□ 0.55
PDAP1-202ENST00000426447 ZNF341Q9BYN7 854 aa18.48■□□□□ 0.55
PDAP1-202ENST00000426447 RIPOR2Q9Y4F9 1068 aa18.48■□□□□ 0.55
PDAP1-202ENST00000426447 NCBP3Q53F19 620 aaKnown RBP18.47■□□□□ 0.55
PDAP1-202ENST00000426447 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.47■□□□□ 0.55
PDAP1-202ENST00000426447 SUCLG2Q96I99 432 aa18.47■□□□□ 0.55
PDAP1-202ENST00000426447 MRIQ9BWK5 157 aa18.47■□□□□ 0.55
PDAP1-202ENST00000426447 SRRDQ9UH36 339 aa18.47■□□□□ 0.55
PDAP1-202ENST00000426447 PDHXO00330 501 aa18.46■□□□□ 0.55
PDAP1-202ENST00000426447 GRK4P32298 578 aa18.46■□□□□ 0.55
PDAP1-202ENST00000426447 FKBP1CQ5VVH2 108 aa18.46■□□□□ 0.55
PDAP1-202ENST00000426447 TRIM47Q96LD4 638 aa18.46■□□□□ 0.55
PDAP1-202ENST00000426447 HTATIP2Q9BUP3 242 aa18.46■□□□□ 0.55
PDAP1-202ENST00000426447 BRCA2P51587 3418 aa18.46■□□□□ 0.55
PDAP1-202ENST00000426447 MAST3O60307 1309 aa18.46■□□□□ 0.55
PDAP1-202ENST00000426447 OSBPP22059 807 aa18.45■□□□□ 0.54
PDAP1-202ENST00000426447 BCAMP50895 628 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms