RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 NARFQ9UHQ1 456 aa18.48■□□□□ 0.55
PKP4-205ENST00000426248 MYO1CO00159 1063 aa18.47■□□□□ 0.55
PKP4-205ENST00000426248 PI16Q6UXB8 463 aa18.47■□□□□ 0.55
PKP4-205ENST00000426248 EFCC1Q9HA90 598 aa18.47■□□□□ 0.55
PKP4-205ENST00000426248 STX6O43752 255 aa18.47■□□□□ 0.55
PKP4-205ENST00000426248 ZAP70P43403 619 aa18.47■□□□□ 0.55
PKP4-205ENST00000426248 RPS8P62241 208 aaKnown RBP18.47■□□□□ 0.55
PKP4-205ENST00000426248 PUM3Q15397 648 aaKnown RBP18.47■□□□□ 0.55
PKP4-205ENST00000426248 E2F4Q16254 413 aa18.47■□□□□ 0.55
PKP4-205ENST00000426248 RBM8AQ9Y5S9 174 aaKnown RBP18.47■□□□□ 0.55
PKP4-205ENST00000426248 ZNF165P49910 485 aa18.47■□□□□ 0.55
PKP4-205ENST00000426248 BANK1Q8NDB2 785 aa18.47■□□□□ 0.55
PKP4-205ENST00000426248 PI4K2BQ8TCG2 481 aa18.47■□□□□ 0.55
PKP4-205ENST00000426248 ATP5JP18859 108 aa18.47■□□□□ 0.55
PKP4-205ENST00000426248 TYRO3Q06418 890 aa18.47■□□□□ 0.55
PKP4-205ENST00000426248 SART3Q15020 963 aaKnown RBP18.47■□□□□ 0.55
PKP4-205ENST00000426248 HMGB2P26583 209 aaKnown RBP18.46■□□□□ 0.55
PKP4-205ENST00000426248 RABL6Q3YEC7 729 aaPredicted RBP18.46■□□□□ 0.55
PKP4-205ENST00000426248 SEC62Q99442 399 aaKnown RBP18.46■□□□□ 0.55
PKP4-205ENST00000426248 AP5Z1O43299 807 aa18.46■□□□□ 0.55
PKP4-205ENST00000426248 ZSCAN22P10073 491 aaPredicted RBP18.46■□□□□ 0.55
PKP4-205ENST00000426248 SLC20A2Q08357 652 aa18.46■□□□□ 0.55
PKP4-205ENST00000426248 UBN2Q6ZU65 1347 aa18.46■□□□□ 0.55
PKP4-205ENST00000426248 PXDNLA1KZ92 1463 aa18.46■□□□□ 0.55
PKP4-205ENST00000426248 CPA1P15085 419 aa18.46■□□□□ 0.55
PKP4-205ENST00000426248 CASQ1P31415 396 aa18.46■□□□□ 0.55
PKP4-205ENST00000426248 CYP2C19P33261 490 aa18.46■□□□□ 0.55
PKP4-205ENST00000426248 TTC31Q49AM3 519 aaPredicted RBP18.46■□□□□ 0.55
PKP4-205ENST00000426248 CLEC4GQ6UXB4 293 aa18.46■□□□□ 0.55
PKP4-205ENST00000426248 MYCBPQ99417 103 aaPredicted RBP18.46■□□□□ 0.55
PKP4-205ENST00000426248 DNAJC25Q9H1X3 360 aa18.46■□□□□ 0.55
PKP4-205ENST00000426248 PARP3Q9Y6F1 533 aa18.46■□□□□ 0.55
PKP4-205ENST00000426248 LMO7Q8WWI1 1683 aa18.46■□□□□ 0.54
PKP4-205ENST00000426248 DHX16O60231 1041 aaKnown RBP18.45■□□□□ 0.54
PKP4-205ENST00000426248 PDE8BO95263 885 aa18.45■□□□□ 0.54
PKP4-205ENST00000426248 LRP10Q7Z4F1 713 aa18.45■□□□□ 0.54
PKP4-205ENST00000426248 ZCCHC17Q9NP64 241 aaKnown RBP18.45■□□□□ 0.54
PKP4-205ENST00000426248 AOX1Q06278 1338 aa18.45■□□□□ 0.54
PKP4-205ENST00000426248 SGSM2O43147 1006 aa18.45■□□□□ 0.54
PKP4-205ENST00000426248 UQCRFS1P1P0C7P4 283 aa18.45■□□□□ 0.54
PKP4-205ENST00000426248 PDRG1Q9NUG6 133 aa18.45■□□□□ 0.54
PKP4-205ENST00000426248 SNW1Q13573 536 aaKnown RBP18.45■□□□□ 0.54
PKP4-205ENST00000426248 MCMDC2Q4G0Z9 681 aa18.45■□□□□ 0.54
PKP4-205ENST00000426248 CCDC83Q8IWF9 413 aa18.45■□□□□ 0.54
PKP4-205ENST00000426248 ZNF34Q8IZ26 560 aa18.45■□□□□ 0.54
PKP4-205ENST00000426248 CACTINQ8WUQ7 758 aaKnown RBP18.45■□□□□ 0.54
PKP4-205ENST00000426248 URI1O94763 535 aaPredicted RBP18.44■□□□□ 0.54
PKP4-205ENST00000426248 TDO2P48775 406 aa18.44■□□□□ 0.54
PKP4-205ENST00000426248 CEBPZQ03701 1054 aaKnown RBP18.44■□□□□ 0.54
PKP4-205ENST00000426248 LPIN2Q92539 896 aa18.44■□□□□ 0.54
PKP4-205ENST00000426248 UTYO14607 1347 aa18.44■□□□□ 0.54
PKP4-205ENST00000426248 CLGNO14967 610 aa18.44■□□□□ 0.54
PKP4-205ENST00000426248 BCAMP50895 628 aa18.44■□□□□ 0.54
PKP4-205ENST00000426248 SYCP1Q15431 976 aa18.44■□□□□ 0.54
PKP4-205ENST00000426248 TFIP11Q9UBB9 837 aaKnown RBP18.44■□□□□ 0.54
PKP4-205ENST00000426248 A0A0D9SFI3 127 aa18.43■□□□□ 0.54
PKP4-205ENST00000426248 PHKA1P46020 1223 aa18.43■□□□□ 0.54
PKP4-205ENST00000426248 GYG1P46976 350 aa18.43■□□□□ 0.54
PKP4-205ENST00000426248 CHRNDQ07001 517 aa18.43■□□□□ 0.54
PKP4-205ENST00000426248 EP400NLQ6ZTU2 488 aa18.43■□□□□ 0.54
PKP4-205ENST00000426248 STK32BQ9NY57 414 aa18.43■□□□□ 0.54
PKP4-205ENST00000426248 CCDC171Q6TFL3 1326 aa18.43■□□□□ 0.54
PKP4-205ENST00000426248 ANKRD65E5RJM6 399 aa18.43■□□□□ 0.54
PKP4-205ENST00000426248 SERPINB2P05120 415 aa18.43■□□□□ 0.54
PKP4-205ENST00000426248 PALD1Q9ULE6 856 aa18.43■□□□□ 0.54
PKP4-205ENST00000426248 ARID5BQ14865 1188 aa18.43■□□□□ 0.54
PKP4-205ENST00000426248 SLFNL1Q499Z3 407 aa18.43■□□□□ 0.54
PKP4-205ENST00000426248 ICE2Q659A1 982 aa18.43■□□□□ 0.54
PKP4-205ENST00000426248 KBTBD3Q8NAB2 608 aa18.43■□□□□ 0.54
PKP4-205ENST00000426248 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.43■□□□□ 0.54
PKP4-205ENST00000426248 USP27XA6NNY8 438 aa18.42■□□□□ 0.54
PKP4-205ENST00000426248 PPFIA3O75145 1194 aa18.42■□□□□ 0.54
PKP4-205ENST00000426248 SLC4A8Q2Y0W8 1093 aa18.42■□□□□ 0.54
PKP4-205ENST00000426248 NFXL1Q6ZNB6 911 aa18.42■□□□□ 0.54
PKP4-205ENST00000426248 BCL9LQ86UU0 1499 aa18.42■□□□□ 0.54
PKP4-205ENST00000426248 XIRP1Q702N8 1843 aaKnown RBP18.42■□□□□ 0.54
PKP4-205ENST00000426248 CTR9Q6PD62 1173 aa18.42■□□□□ 0.54
PKP4-205ENST00000426248 MIGA1Q8NAN2 632 aa18.42■□□□□ 0.54
PKP4-205ENST00000426248 MINDY4BA8MYZ0 360 aa18.42■□□□□ 0.54
PKP4-205ENST00000426248 RIMBP2O15034 1052 aa18.42■□□□□ 0.54
PKP4-205ENST00000426248 OAS2P29728 719 aaKnown RBP18.42■□□□□ 0.54
PKP4-205ENST00000426248 TTF1Q15361 905 aaPredicted RBP18.42■□□□□ 0.54
PKP4-205ENST00000426248 FAM173BQ6P4H8 233 aa18.42■□□□□ 0.54
PKP4-205ENST00000426248 ATG9AQ7Z3C6 839 aa18.42■□□□□ 0.54
PKP4-205ENST00000426248 LRRC2Q9BYS8 371 aa18.42■□□□□ 0.54
PKP4-205ENST00000426248 CBX8Q9HC52 389 aa18.42■□□□□ 0.54
PKP4-205ENST00000426248 DACT1Q9NYF0 836 aa18.42■□□□□ 0.54
PKP4-205ENST00000426248 COL14A1Q05707 1796 aaKnown RBP18.42■□□□□ 0.54
PKP4-205ENST00000426248 MROH5Q6ZUA9 1318 aa18.42■□□□□ 0.54
PKP4-205ENST00000426248 SEC31AO94979 1220 aaKnown RBP18.42■□□□□ 0.54
PKP4-205ENST00000426248 RFX5P48382 616 aaPredicted RBP18.42■□□□□ 0.54
PKP4-205ENST00000426248 EN1Q05925 392 aaPredicted RBP18.42■□□□□ 0.54
PKP4-205ENST00000426248 CCDC102BQ68D86 513 aa18.42■□□□□ 0.54
PKP4-205ENST00000426248 RNF113AO15541 343 aaKnown RBP18.41■□□□□ 0.54
PKP4-205ENST00000426248 SMC2O95347 1197 aa18.41■□□□□ 0.54
PKP4-205ENST00000426248 AHDC1Q5TGY3 1603 aaPredicted RBP18.41■□□□□ 0.54
PKP4-205ENST00000426248 CCDC69A6NI79 296 aa18.41■□□□□ 0.54
PKP4-205ENST00000426248 CIAO1O76071 339 aa18.41■□□□□ 0.54
PKP4-205ENST00000426248 SYT1P21579 422 aa18.41■□□□□ 0.54
PKP4-205ENST00000426248 IBSPP21815 317 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms