RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 TFCP2Q12800 502 aa21.64■■□□□ 1.05
SLC6A1-202ENST00000425938 TTLL12Q14166 644 aaPredicted RBP21.64■■□□□ 1.05
SLC6A1-202ENST00000425938 PANK1Q8TE04 598 aa21.64■■□□□ 1.05
SLC6A1-202ENST00000425938 DEFB129Q9H1M3 183 aa21.64■■□□□ 1.05
SLC6A1-202ENST00000425938 C1orf115Q9H7X2 142 aa21.64■■□□□ 1.05
SLC6A1-202ENST00000425938 VEZTQ9HBM0 779 aa21.64■■□□□ 1.05
SLC6A1-202ENST00000425938 PPP2R3BQ9Y5P8 575 aa21.64■■□□□ 1.05
SLC6A1-202ENST00000425938 SEMA3EO15041 775 aa21.63■■□□□ 1.05
SLC6A1-202ENST00000425938 SLC10A3P09131 477 aa21.63■■□□□ 1.05
SLC6A1-202ENST00000425938 ATP8B2P98198 1209 aa21.63■■□□□ 1.05
SLC6A1-202ENST00000425938 HDLBPQ00341 1268 aaKnown RBP21.63■■□□□ 1.05
SLC6A1-202ENST00000425938 ZIC5Q96T25 663 aa21.63■■□□□ 1.05
SLC6A1-202ENST00000425938 A0A1B0GUL7 405 aa21.62■■□□□ 1.05
SLC6A1-202ENST00000425938 PHKA1P46020 1223 aa21.62■■□□□ 1.05
SLC6A1-202ENST00000425938 TIMM10P62072 90 aa21.62■■□□□ 1.05
SLC6A1-202ENST00000425938 TNFAIP1Q13829 316 aa21.62■■□□□ 1.05
SLC6A1-202ENST00000425938 GRIK5Q16478 980 aa21.62■■□□□ 1.05
SLC6A1-202ENST00000425938 TEKT1Q969V4 418 aa21.62■■□□□ 1.05
SLC6A1-202ENST00000425938 DENND2AQ9ULE3 1009 aa21.62■■□□□ 1.05
SLC6A1-202ENST00000425938 CAPN15O75808 1086 aa21.61■■□□□ 1.05
SLC6A1-202ENST00000425938 ADORA1P30542 326 aa21.61■■□□□ 1.05
SLC6A1-202ENST00000425938 KIF23Q02241 960 aaPredicted RBP21.61■■□□□ 1.05
SLC6A1-202ENST00000425938 POLA2Q14181 598 aa21.61■■□□□ 1.05
SLC6A1-202ENST00000425938 SPDYE2Q495Y8 402 aa21.61■■□□□ 1.05
SLC6A1-202ENST00000425938 CCDC102BQ68D86 513 aa21.61■■□□□ 1.05
SLC6A1-202ENST00000425938 SSH3Q8TE77 659 aa21.61■■□□□ 1.05
SLC6A1-202ENST00000425938 OS9Q13438 667 aaPredicted RBP21.6■■□□□ 1.05
SLC6A1-202ENST00000425938 MVPQ14764 893 aaKnown RBP21.6■■□□□ 1.05
SLC6A1-202ENST00000425938 ARMC9Q7Z3E5 817 aa21.6■■□□□ 1.05
SLC6A1-202ENST00000425938 XAGE2Q96GT9 111 aa21.6■■□□□ 1.05
SLC6A1-202ENST00000425938 NEUROD6Q96NK8 337 aa21.6■■□□□ 1.05
SLC6A1-202ENST00000425938 MRIQ9BWK5 157 aa21.6■■□□□ 1.05
SLC6A1-202ENST00000425938 TDRD3Q9H7E2 651 aaKnown RBP21.6■■□□□ 1.05
SLC6A1-202ENST00000425938 ZNF70Q9UC06 446 aaPredicted RBP21.6■■□□□ 1.05
SLC6A1-202ENST00000425938 TSKSQ9UJT2 592 aa21.6■■□□□ 1.05
SLC6A1-202ENST00000425938 AOX1Q06278 1338 aa21.59■■□□□ 1.05
SLC6A1-202ENST00000425938 UBE2Q2LH0YL09 131 aa21.59■■□□□ 1.05
SLC6A1-202ENST00000425938 SUPT20HL1Q3ZLR7 823 aa21.59■■□□□ 1.05
SLC6A1-202ENST00000425938 MOB2Q70IA6 237 aa21.59■■□□□ 1.05
SLC6A1-202ENST00000425938 RASAL3Q86YV0 1011 aa21.59■■□□□ 1.05
SLC6A1-202ENST00000425938 REM2Q8IYK8 340 aaPredicted RBP21.59■■□□□ 1.05
SLC6A1-202ENST00000425938 ZBTB22O15209 634 aa21.58■■□□□ 1.05
SLC6A1-202ENST00000425938 SURF6O75683 361 aaKnown RBP21.58■■□□□ 1.05
SLC6A1-202ENST00000425938 GORABQ5T7V8 394 aa21.58■■□□□ 1.05
SLC6A1-202ENST00000425938 ZGPATQ8N5A5 531 aaKnown RBP21.58■■□□□ 1.05
SLC6A1-202ENST00000425938 ZDHHC15Q96MV8 337 aa21.58■■□□□ 1.05
SLC6A1-202ENST00000425938 LDHBP07195 334 aaKnown RBP21.57■■□□□ 1.04
SLC6A1-202ENST00000425938 TNNI2P48788 182 aa21.57■■□□□ 1.04
SLC6A1-202ENST00000425938 PRKG1Q13976 671 aa21.57■■□□□ 1.04
SLC6A1-202ENST00000425938 RASA3Q14644 834 aa21.57■■□□□ 1.04
SLC6A1-202ENST00000425938 HHIPL2Q6UWX4 724 aa21.57■■□□□ 1.04
SLC6A1-202ENST00000425938 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.57■■□□□ 1.04
SLC6A1-202ENST00000425938 SAGE1Q9NXZ1 904 aa21.57■■□□□ 1.04
SLC6A1-202ENST00000425938 TMOD2Q9NZR1 351 aa21.57■■□□□ 1.04
SLC6A1-202ENST00000425938 DDX19BQ9UMR2 479 aa21.57■■□□□ 1.04
SLC6A1-202ENST00000425938 SALL1Q9NSC2 1324 aa21.56■■□□□ 1.04
SLC6A1-202ENST00000425938 PPP1R12BO60237 982 aaPredicted RBP21.56■■□□□ 1.04
SLC6A1-202ENST00000425938 CSRNP1Q96S65 589 aa21.56■■□□□ 1.04
SLC6A1-202ENST00000425938 CHMP4BQ9H444 224 aaKnown RBP21.56■■□□□ 1.04
SLC6A1-202ENST00000425938 ANGEL1Q9UNK9 670 aaKnown RBP21.56■■□□□ 1.04
SLC6A1-202ENST00000425938 AKAP11Q9UKA4 1901 aa21.56■■□□□ 1.04
SLC6A1-202ENST00000425938 PDS5AQ29RF7 1337 aaKnown RBP21.55■■□□□ 1.04
SLC6A1-202ENST00000425938 RASGRF1Q13972 1273 aa21.55■■□□□ 1.04
SLC6A1-202ENST00000425938 CEP85Q6P2H3 762 aa21.55■■□□□ 1.04
SLC6A1-202ENST00000425938 COG6Q9Y2V7 657 aa21.55■■□□□ 1.04
SLC6A1-202ENST00000425938 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.55■■□□□ 1.04
SLC6A1-202ENST00000425938 TCP10L2B9ZVM9 353 aa21.54■■□□□ 1.04
SLC6A1-202ENST00000425938 PRDX5P30044 214 aa21.54■■□□□ 1.04
SLC6A1-202ENST00000425938 GPR108Q9NPR9 543 aa21.54■■□□□ 1.04
SLC6A1-202ENST00000425938 NOP58Q9Y2X3 529 aaKnown RBP21.54■■□□□ 1.04
SLC6A1-202ENST00000425938 MYH2Q9UKX2 1941 aa21.54■■□□□ 1.04
SLC6A1-202ENST00000425938 NBPF12Q5TAG4 269 aaPredicted RBP21.53■■□□□ 1.04
SLC6A1-202ENST00000425938 APOBEC3HQ6NTF7 200 aaKnown RBP21.53■■□□□ 1.04
SLC6A1-202ENST00000425938 RNF186Q9NXI6 227 aa21.53■■□□□ 1.04
SLC6A1-202ENST00000425938 TNNI3KQ59H18 835 aa21.52■■□□□ 1.04
SLC6A1-202ENST00000425938 LDLRAD1Q5T700 205 aa21.52■■□□□ 1.04
SLC6A1-202ENST00000425938 SPTY2D1Q68D10 685 aaPredicted RBP21.52■■□□□ 1.04
SLC6A1-202ENST00000425938 DZIP1Q86YF9 867 aaKnown RBP21.52■■□□□ 1.04
SLC6A1-202ENST00000425938 ABCF2Q9UG63 623 aa21.52■■□□□ 1.04
SLC6A1-202ENST00000425938 FPGT-TNNI3KV9GXZ4 949 aa21.52■■□□□ 1.04
SLC6A1-202ENST00000425938 SSC5DA1L4H1 1573 aa21.52■■□□□ 1.04
SLC6A1-202ENST00000425938 TRPA1O75762 1119 aa21.51■■□□□ 1.03
SLC6A1-202ENST00000425938 UQCRFS1P1P0C7P4 283 aa21.51■■□□□ 1.03
SLC6A1-202ENST00000425938 IREB2P48200 963 aaKnown RBP21.51■■□□□ 1.03
SLC6A1-202ENST00000425938 PDE3AQ14432 1141 aa21.51■■□□□ 1.03
SLC6A1-202ENST00000425938 DIXDC1Q155Q3 683 aa21.51■■□□□ 1.03
SLC6A1-202ENST00000425938 MAP3K11Q16584 847 aa21.51■■□□□ 1.03
SLC6A1-202ENST00000425938 FKBP1CQ5VVH2 108 aa21.51■■□□□ 1.03
SLC6A1-202ENST00000425938 DAGLAQ9Y4D2 1042 aa21.51■■□□□ 1.03
SLC6A1-202ENST00000425938 AK9Q5TCS8 1911 aa21.51■■□□□ 1.03
SLC6A1-202ENST00000425938 CACNB3P54284 484 aa21.5■■□□□ 1.03
SLC6A1-202ENST00000425938 FAM83AQ86UY5 434 aa21.5■■□□□ 1.03
SLC6A1-202ENST00000425938 ERC1Q8IUD2 1116 aa21.5■■□□□ 1.03
SLC6A1-202ENST00000425938 SLF2Q8IX21 1173 aa21.5■■□□□ 1.03
SLC6A1-202ENST00000425938 TMEM39BQ9GZU3 492 aa21.5■■□□□ 1.03
SLC6A1-202ENST00000425938 FZD1Q9UP38 647 aa21.5■■□□□ 1.03
SLC6A1-202ENST00000425938 CASP8AP2Q9UKL3 1982 aa21.49■■□□□ 1.03
SLC6A1-202ENST00000425938 UNCXA6NJT0 531 aa21.49■■□□□ 1.03
SLC6A1-202ENST00000425938 HMMRO75330 724 aa21.49■■□□□ 1.03
SLC6A1-202ENST00000425938 ARID4AP29374 1257 aaPredicted RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms