RNA–Protein interactions for RNA: ENST00000424089.5

POLR1A-204, Transcript of RNA polymerase I subunit A, human

TSL 3

Gene POLR1A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR1A-204	ENST00000424089	FAM227B	Q96M60	508 aa		11.98	□□□□□ -0.49
POLR1A-204	ENST00000424089	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.98	□□□□□ -0.49
POLR1A-204	ENST00000424089	FOXD4L1	Q9NU39	408 aa		11.98	□□□□□ -0.49
POLR1A-204	ENST00000424089	PAG1	Q9NWQ8	432 aa		11.98	□□□□□ -0.49
POLR1A-204	ENST00000424089	ISY1	Q9ULR0	285 aa	Known RBP	11.98	□□□□□ -0.49
POLR1A-204	ENST00000424089	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.98	□□□□□ -0.49
POLR1A-204	ENST00000424089	RBM8A	Q9Y5S9	174 aa	Known RBP	11.98	□□□□□ -0.49
POLR1A-204	ENST00000424089		U3KPZ7	1027 aa	Predicted RBP	11.98	□□□□□ -0.49
POLR1A-204	ENST00000424089	PDE4DIP	Q5VU43	2346 aa		11.97	□□□□□ -0.49
POLR1A-204	ENST00000424089	PPIP5K2	O43314	1243 aa		11.97	□□□□□ -0.49
POLR1A-204	ENST00000424089	TAF5L	O75529	589 aa		11.97	□□□□□ -0.49
POLR1A-204	ENST00000424089	CELF2	O95319	508 aa	Known RBP	11.97	□□□□□ -0.49
POLR1A-204	ENST00000424089	ZFY	P08048	801 aa	Predicted RBP	11.97	□□□□□ -0.49
POLR1A-204	ENST00000424089	HOXA10	P31260	410 aa	Predicted RBP	11.97	□□□□□ -0.49
POLR1A-204	ENST00000424089	LRRC24	Q50LG9	513 aa		11.97	□□□□□ -0.49
POLR1A-204	ENST00000424089	CREB3L3	Q68CJ9	461 aa		11.97	□□□□□ -0.49
POLR1A-204	ENST00000424089	RUFY3	Q7L099	469 aa		11.97	□□□□□ -0.49
POLR1A-204	ENST00000424089	SAPCD2	Q86UD0	394 aa		11.97	□□□□□ -0.49
POLR1A-204	ENST00000424089	RASEF	Q8IZ41	740 aa		11.97	□□□□□ -0.49
POLR1A-204	ENST00000424089	SUPT20H	Q8NEM7	779 aa		11.97	□□□□□ -0.49
POLR1A-204	ENST00000424089	UPF3B	Q9BZI7	483 aa	Known RBP	11.97	□□□□□ -0.49
POLR1A-204	ENST00000424089	VPS33B	Q9H267	617 aa		11.97	□□□□□ -0.49
POLR1A-204	ENST00000424089	GPRC5D	Q9NZD1	345 aa		11.97	□□□□□ -0.49
POLR1A-204	ENST00000424089	RIPOR2	Q9Y4F9	1068 aa		11.97	□□□□□ -0.49
POLR1A-204	ENST00000424089	COL4A5	P29400	1685 aa		11.97	□□□□□ -0.49
POLR1A-204	ENST00000424089	AK9	Q5TCS8	1911 aa		11.96	□□□□□ -0.49
POLR1A-204	ENST00000424089		A0A0D9SFI3	127 aa		11.96	□□□□□ -0.49
POLR1A-204	ENST00000424089	BAG4	O95429	457 aa	Known RBP	11.96	□□□□□ -0.49
POLR1A-204	ENST00000424089	IFIT1	P09914	478 aa	Known RBP	11.96	□□□□□ -0.49
POLR1A-204	ENST00000424089	TIMM10	P62072	90 aa		11.96	□□□□□ -0.49
POLR1A-204	ENST00000424089	GORAB	Q5T7V8	394 aa		11.96	□□□□□ -0.49
POLR1A-204	ENST00000424089	ZNF594	Q96JF6	807 aa	Predicted RBP	11.96	□□□□□ -0.49
POLR1A-204	ENST00000424089	CRAMP1	Q96RY5	1269 aa		11.96	□□□□□ -0.49
POLR1A-204	ENST00000424089	DNAJC2	Q99543	621 aa	Known RBP	11.96	□□□□□ -0.49
POLR1A-204	ENST00000424089	UTP14A	Q9BVJ6	771 aa	Known RBP	11.96	□□□□□ -0.49
POLR1A-204	ENST00000424089	ZNF408	Q9H9D4	720 aa		11.96	□□□□□ -0.49
POLR1A-204	ENST00000424089	PDRG1	Q9NUG6	133 aa		11.96	□□□□□ -0.49
POLR1A-204	ENST00000424089	MROH5	Q6ZUA9	1318 aa		11.95	□□□□□ -0.5
POLR1A-204	ENST00000424089	SLC27A2	O14975	620 aa		11.95	□□□□□ -0.5
POLR1A-204	ENST00000424089	HMGB1	P09429	215 aa	Known RBP	11.95	□□□□□ -0.5
POLR1A-204	ENST00000424089	CAST	P20810	708 aa	Known RBP	11.95	□□□□□ -0.5
POLR1A-204	ENST00000424089	ITGA6	P23229	1130 aa		11.95	□□□□□ -0.5
POLR1A-204	ENST00000424089	GPT	P24298	496 aa		11.95	□□□□□ -0.5
POLR1A-204	ENST00000424089	L1TD1	Q5T7N2	865 aa	Known RBP	11.95	□□□□□ -0.5
POLR1A-204	ENST00000424089	CIAPIN1	Q6FI81	312 aa		11.95	□□□□□ -0.5
POLR1A-204	ENST00000424089	LDHAL6A	Q6ZMR3	332 aa		11.95	□□□□□ -0.5
POLR1A-204	ENST00000424089	JAKMIP1	Q96N16	626 aa	Known RBP	11.95	□□□□□ -0.5
POLR1A-204	ENST00000424089	DSCC1	Q9BVC3	393 aa		11.95	□□□□□ -0.5
POLR1A-204	ENST00000424089	RTL9	Q8NET4	1388 aa		11.94	□□□□□ -0.5
POLR1A-204	ENST00000424089	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.94	□□□□□ -0.5
POLR1A-204	ENST00000424089	RNF113A	O15541	343 aa	Known RBP	11.94	□□□□□ -0.5
POLR1A-204	ENST00000424089	BRD1	O95696	1058 aa		11.94	□□□□□ -0.5
POLR1A-204	ENST00000424089	AK2	P54819	239 aa		11.94	□□□□□ -0.5
POLR1A-204	ENST00000424089	NOG	Q13253	232 aa		11.94	□□□□□ -0.5
POLR1A-204	ENST00000424089	TNIP1	Q15025	636 aa		11.94	□□□□□ -0.5
POLR1A-204	ENST00000424089	AOC3	Q16853	763 aa		11.94	□□□□□ -0.5
POLR1A-204	ENST00000424089	METTL24	Q5JXM2	366 aa		11.94	□□□□□ -0.5
POLR1A-204	ENST00000424089	TTC39A	Q5SRH9	613 aa		11.94	□□□□□ -0.5
POLR1A-204	ENST00000424089	ZMYM1	Q5SVZ6	1142 aa		11.94	□□□□□ -0.5
POLR1A-204	ENST00000424089	ZSCAN25	Q6NSZ9	544 aa		11.94	□□□□□ -0.5
POLR1A-204	ENST00000424089	ZGPAT	Q8N5A5	531 aa	Known RBP	11.94	□□□□□ -0.5
POLR1A-204	ENST00000424089	ZC3H15	Q8WU90	426 aa	Known RBP	11.94	□□□□□ -0.5
POLR1A-204	ENST00000424089	XAGE2	Q96GT9	111 aa		11.94	□□□□□ -0.5
POLR1A-204	ENST00000424089	NLRP3	Q96P20	1036 aa		11.94	□□□□□ -0.5
POLR1A-204	ENST00000424089	PUS3	Q9BZE2	481 aa	Known RBP	11.94	□□□□□ -0.5
POLR1A-204	ENST00000424089	ZNRF3	Q9ULT6	936 aa		11.94	□□□□□ -0.5
POLR1A-204	ENST00000424089	SPEF2	Q9C093	1822 aa		11.94	□□□□□ -0.5
POLR1A-204	ENST00000424089	GOLIM4	O00461	696 aa		11.93	□□□□□ -0.5
POLR1A-204	ENST00000424089	GMPS	P49915	693 aa	Predicted RBP	11.93	□□□□□ -0.5
POLR1A-204	ENST00000424089	TTF1	Q15361	905 aa	Predicted RBP	11.93	□□□□□ -0.5
POLR1A-204	ENST00000424089	ATP2B3	Q16720	1220 aa		11.93	□□□□□ -0.5
POLR1A-204	ENST00000424089	BLOC1S2	Q6QNY1	142 aa		11.93	□□□□□ -0.5
POLR1A-204	ENST00000424089	CDC37L1	Q7L3B6	337 aa		11.93	□□□□□ -0.5
POLR1A-204	ENST00000424089	CHMP4C	Q96CF2	233 aa		11.93	□□□□□ -0.5
POLR1A-204	ENST00000424089	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.93	□□□□□ -0.5
POLR1A-204	ENST00000424089	GREM2	Q9H772	168 aa		11.93	□□□□□ -0.5
POLR1A-204	ENST00000424089	CNNM1	Q9NRU3	951 aa		11.93	□□□□□ -0.5
POLR1A-204	ENST00000424089	UBN2	Q6ZU65	1347 aa		11.92	□□□□□ -0.5
POLR1A-204	ENST00000424089	PDE8B	O95263	885 aa		11.92	□□□□□ -0.5
POLR1A-204	ENST00000424089	UQCRFS1P1	P0C7P4	283 aa		11.92	□□□□□ -0.5
POLR1A-204	ENST00000424089	CXCL9	Q07325	125 aa		11.92	□□□□□ -0.5
POLR1A-204	ENST00000424089	KLHL40	Q2TBA0	621 aa		11.92	□□□□□ -0.5
POLR1A-204	ENST00000424089	CCDC152	Q4G0S7	254 aa		11.92	□□□□□ -0.5
POLR1A-204	ENST00000424089	SUSD4	Q5VX71	490 aa		11.92	□□□□□ -0.5
POLR1A-204	ENST00000424089	DPP8	Q6V1X1	898 aa	Predicted RBP	11.92	□□□□□ -0.5
POLR1A-204	ENST00000424089	DDX46	Q7L014	1031 aa	Known RBP	11.92	□□□□□ -0.5
POLR1A-204	ENST00000424089	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.92	□□□□□ -0.5
POLR1A-204	ENST00000424089	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.92	□□□□□ -0.5	4e-7	■■■■□ 23.1
POLR1A-204	ENST00000424089	PGAP2	Q9UHJ9	254 aa		11.92	□□□□□ -0.5
POLR1A-204	ENST00000424089	CTNNA3	Q9UI47	895 aa		11.92	□□□□□ -0.5
POLR1A-204	ENST00000424089	ATP6V0A2	Q9Y487	856 aa		11.92	□□□□□ -0.5
POLR1A-204	ENST00000424089	AKAP11	Q9UKA4	1901 aa		11.92	□□□□□ -0.5
POLR1A-204	ENST00000424089		H7C1D1	291 aa		11.91	□□□□□ -0.5
POLR1A-204	ENST00000424089	RPS6KB1	P23443	525 aa		11.91	□□□□□ -0.5
POLR1A-204	ENST00000424089	PUM3	Q15397	648 aa	Known RBP	11.91	□□□□□ -0.5
POLR1A-204	ENST00000424089	ADCK5	Q3MIX3	580 aa		11.91	□□□□□ -0.5
POLR1A-204	ENST00000424089	VGLL2	Q8N8G2	317 aa		11.91	□□□□□ -0.5
POLR1A-204	ENST00000424089	LPIN2	Q92539	896 aa		11.91	□□□□□ -0.5
POLR1A-204	ENST00000424089	EDC3	Q96F86	508 aa	Known RBP	11.91	□□□□□ -0.5
POLR1A-204	ENST00000424089	NEK1	Q96PY6	1258 aa		11.91	□□□□□ -0.5

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