RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 CCL15-CCL14A0A0B4J2E2 113 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 FSD2A1L4K1 749 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 SNRPA1P09661 255 aaKnown RBP4.17□□□□□ -1.74
TOP2A-201ENST00000423485 RPS12P25398 132 aaKnown RBP4.17□□□□□ -1.74
TOP2A-201ENST00000423485 DDIT3P35638 169 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 FKBP5Q13451 457 aaPredicted RBP4.17□□□□□ -1.74
TOP2A-201ENST00000423485 ELOAQ14241 798 aaKnown RBP4.17□□□□□ -1.74
TOP2A-201ENST00000423485 CCL15Q16663 113 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 TBC1D10BQ4KMP7 808 aaPredicted RBP4.17□□□□□ -1.74
TOP2A-201ENST00000423485 SGO2Q562F6 1265 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 MCF2L2Q86YR7 1114 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 GANCQ8TET4 914 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 TBC1D22AQ8WUA7 517 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 ATRIPQ8WXE1 791 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 KRT23Q9C075 422 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 SLC32A1Q9H598 525 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 TMEM2Q9UHN6 1383 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 PTMAP06454 111 aaKnown RBP4.17□□□□□ -1.74
TOP2A-201ENST00000423485 ZSCAN20P17040 1043 aaPredicted RBP4.17□□□□□ -1.74
TOP2A-201ENST00000423485 KRT17Q04695 432 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 RNASELQ05823 741 aaKnown RBP4.17□□□□□ -1.74
TOP2A-201ENST00000423485 HDDC3Q8N4P3 179 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 DCAF5Q96JK2 942 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 MRPS17Q9Y2R5 130 aaKnown RBP4.17□□□□□ -1.74
TOP2A-201ENST00000423485 PIK3R4Q99570 1358 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 NHSL1Q5SYE7 1610 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 RGPD5Q99666 1765 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 PICALMQ13492 652 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 BROXQ5VW32 411 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 ZSCAN1Q8NBB4 408 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 MPHOSPH9Q99550 1183 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 MRS2Q9HD23 443 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 IL1RAPL2Q9NP60 686 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 CDC42BPGQ6DT37 1551 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 XRN1Q8IZH2 1706 aaKnown RBP4.17□□□□□ -1.74
TOP2A-201ENST00000423485 USP17L8P0C7I0 530 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 HSPA5P11021 654 aaKnown RBP4.17□□□□□ -1.74
TOP2A-201ENST00000423485 RGS2P41220 211 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 FKBP1BP68106 108 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 PPIGQ13427 754 aaKnown RBP eCLIP4.17□□□□□ -1.747e-7■□□□□ 11.2
TOP2A-201ENST00000423485 CERS3Q8IU89 383 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 CCDC150Q8NCX0 1101 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 PHKBQ93100 1093 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 GOPCQ9HD26 462 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 ANKFY1Q9P2R3 1169 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 SEC63Q9UGP8 760 aaKnown RBP4.17□□□□□ -1.74
TOP2A-201ENST00000423485 CARNS1A5YM72 827 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 RAD17O75943 681 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 PSMD2Q13200 908 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 UBE4AQ14139 1066 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 CHRDL2Q6WN34 429 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 ZNF341Q9BYN7 854 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 SNRKQ9NRH2 765 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 CDV3Q9UKY7 258 aaKnown RBP4.16□□□□□ -1.74
TOP2A-201ENST00000423485 ADAMTS7Q9UKP4 1686 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 GNAT3A8MTJ3 354 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 BBOX1O75936 387 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 GJB1P08034 283 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 BFSP2Q13515 415 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 TRIM6Q9C030 488 aaPredicted RBP4.16□□□□□ -1.74
TOP2A-201ENST00000423485 MCOLN1Q9GZU1 580 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 IQSEC3Q9UPP2 1182 aaPredicted RBP4.16□□□□□ -1.74
TOP2A-201ENST00000423485 LMTK2Q8IWU2 1503 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 SHANK3Q9BYB0 1731 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 P4HBP07237 508 aaKnown RBP4.16□□□□□ -1.74
TOP2A-201ENST00000423485 SUPT20HL2P0C7V6 817 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 INAVAQ3KP66 663 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 BARGINQ6ZT62 677 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 STAMQ92783 540 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 GLT1D1Q96MS3 346 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 AZI2Q9H6S1 392 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 BCCIPQ9P287 314 aaKnown RBP eCLIP4.16□□□□□ -1.74
TOP2A-201ENST00000423485 ATP10DQ9P241 1426 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 MYPNQ86TC9 1320 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 GLTPD2A6NH11 291 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 RIOK3O14730 519 aaKnown RBP4.16□□□□□ -1.74
TOP2A-201ENST00000423485 KRT18P05783 430 aaKnown RBP4.16□□□□□ -1.74
TOP2A-201ENST00000423485 TPM2P07951 284 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 MYL3P08590 195 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 MMP14P50281 582 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 BCAMP50895 628 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 ANKRD45Q5TZF3 282 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 MAP1SQ66K74 1059 aaPredicted RBP4.16□□□□□ -1.74
TOP2A-201ENST00000423485 CC2D1AQ6P1N0 951 aaPredicted RBP4.16□□□□□ -1.74
TOP2A-201ENST00000423485 LARP1Q6PKG0 1096 aaKnown RBP4.16□□□□□ -1.74
TOP2A-201ENST00000423485 CDK5RAP3Q96JB5 506 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 FAM161BQ96MY7 647 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 ANTXR1Q9H6X2 564 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 C3P01024 1663 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 MAP3K5Q99683 1374 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 PRMT3O60678 531 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 RLBP1P12271 317 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 KIF23Q02241 960 aaPredicted RBP4.16□□□□□ -1.74
TOP2A-201ENST00000423485 ARID5BQ14865 1188 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 NBPF12Q5TAG4 269 aaPredicted RBP4.16□□□□□ -1.74
TOP2A-201ENST00000423485 FBXO46Q6PJ61 603 aaPredicted RBP4.16□□□□□ -1.74
TOP2A-201ENST00000423485 DEFB123Q8N688 67 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 NLRP7Q8WX94 980 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 SLITRK6Q9H5Y7 841 aa4.16□□□□□ -1.74
TOP2A-201ENST00000423485 EFCAB6Q5THR3 1501 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms