RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 LDLRAD1Q5T700 205 aa18.93■□□□□ 0.62
USB1-202ENST00000423271 NBPF12Q5TAG4 269 aaPredicted RBP18.93■□□□□ 0.62
USB1-202ENST00000423271 DZIP1LQ8IYY4 767 aaKnown RBP18.93■□□□□ 0.62
USB1-202ENST00000423271 TBC1D22AQ8WUA7 517 aa18.93■□□□□ 0.62
USB1-202ENST00000423271 ABHD8Q96I13 439 aa18.93■□□□□ 0.62
USB1-202ENST00000423271 FBXO3Q9UK99 471 aa18.93■□□□□ 0.62
USB1-202ENST00000423271 ATP2B3Q16720 1220 aa18.92■□□□□ 0.62
USB1-202ENST00000423271 ATF7IPQ6VMQ6 1270 aa18.92■□□□□ 0.62
USB1-202ENST00000423271 CDAN1Q8IWY9 1227 aa18.92■□□□□ 0.62
USB1-202ENST00000423271 CLUAP1Q96AJ1 413 aa18.92■□□□□ 0.62
USB1-202ENST00000423271 COPRSQ9NQ92 184 aa18.92■□□□□ 0.62
USB1-202ENST00000423271 HDAC5Q9UQL6 1122 aa18.92■□□□□ 0.62
USB1-202ENST00000423271 IPO8O15397 1037 aaKnown RBP18.91■□□□□ 0.62
USB1-202ENST00000423271 GNAI3P08754 354 aa18.91■□□□□ 0.62
USB1-202ENST00000423271 IL15P40933 162 aaPredicted RBP18.91■□□□□ 0.62
USB1-202ENST00000423271 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.91■□□□□ 0.62
USB1-202ENST00000423271 CEP126Q9P2H0 1117 aa18.91■□□□□ 0.62
USB1-202ENST00000423271 TCP10L2B9ZVM9 353 aa18.9■□□□□ 0.62
USB1-202ENST00000423271 MAP3K11Q16584 847 aa18.9■□□□□ 0.62
USB1-202ENST00000423271 REM2Q8IYK8 340 aaPredicted RBP18.9■□□□□ 0.62
USB1-202ENST00000423271 CLMNQ96JQ2 1002 aa18.9■□□□□ 0.62
USB1-202ENST00000423271 OTOFQ9HC10 1997 aa18.9■□□□□ 0.62
USB1-202ENST00000423271 SRGAP3O43295 1099 aa18.89■□□□□ 0.61
USB1-202ENST00000423271 ADORA1P30542 326 aa18.89■□□□□ 0.61
USB1-202ENST00000423271 HDLBPQ00341 1268 aaKnown RBP18.89■□□□□ 0.61
USB1-202ENST00000423271 SUPT20HL1Q3ZLR7 823 aa18.89■□□□□ 0.61
USB1-202ENST00000423271 TEKT1Q969V4 418 aa18.89■□□□□ 0.61
USB1-202ENST00000423271 PPP1R12BO60237 982 aaPredicted RBP18.88■□□□□ 0.61
USB1-202ENST00000423271 CACNB3P54284 484 aa18.88■□□□□ 0.61
USB1-202ENST00000423271 MTX1Q13505 466 aa18.88■□□□□ 0.61
USB1-202ENST00000423271 TNFAIP1Q13829 316 aa18.88■□□□□ 0.61
USB1-202ENST00000423271 SPRYD7Q5W111 196 aa18.88■□□□□ 0.61
USB1-202ENST00000423271 TMEM57Q8N5G2 664 aa18.88■□□□□ 0.61
USB1-202ENST00000423271 TEPSINQ96N21 525 aa18.88■□□□□ 0.61
USB1-202ENST00000423271 MCOLN1Q9GZU1 580 aa18.88■□□□□ 0.61
USB1-202ENST00000423271 TMEM39BQ9GZU3 492 aa18.88■□□□□ 0.61
USB1-202ENST00000423271 USP2O75604 605 aaPredicted RBP18.87■□□□□ 0.61
USB1-202ENST00000423271 PHKA1P46020 1223 aa18.87■□□□□ 0.61
USB1-202ENST00000423271 ZKSCAN2Q63HK3 967 aa18.87■□□□□ 0.61
USB1-202ENST00000423271 WDR66Q8TBY9 1149 aa18.87■□□□□ 0.61
USB1-202ENST00000423271 ZDHHC15Q96MV8 337 aa18.87■□□□□ 0.61
USB1-202ENST00000423271 SUGT1Q9Y2Z0 365 aa18.87■□□□□ 0.61
USB1-202ENST00000423271 MAST3O60307 1309 aa18.86■□□□□ 0.61
USB1-202ENST00000423271 GNAI2P04899 355 aa18.86■□□□□ 0.61
USB1-202ENST00000423271 TM4SF4P48230 202 aa18.86■□□□□ 0.61
USB1-202ENST00000423271 DGKZQ13574 1117 aa18.86■□□□□ 0.61
USB1-202ENST00000423271 APOBEC3HQ6NTF7 200 aaKnown RBP18.86■□□□□ 0.61
USB1-202ENST00000423271 SLC10A4Q96EP9 437 aa18.86■□□□□ 0.61
USB1-202ENST00000423271 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.86■□□□□ 0.61
USB1-202ENST00000423271 PRDX5P30044 214 aa18.85■□□□□ 0.61
USB1-202ENST00000423271 IREB2P48200 963 aaKnown RBP18.85■□□□□ 0.61
USB1-202ENST00000423271 TFCP2Q12800 502 aa18.85■□□□□ 0.61
USB1-202ENST00000423271 WNK4Q96J92 1243 aa18.85■□□□□ 0.61
USB1-202ENST00000423271 YTHDC1Q96MU7 727 aaKnown RBP18.85■□□□□ 0.61
USB1-202ENST00000423271 MRIQ9BWK5 157 aa18.85■□□□□ 0.61
USB1-202ENST00000423271 LAMB1P07942 1786 aa18.84■□□□□ 0.61
USB1-202ENST00000423271 PNMA6EA0A0J9YXQ4 647 aa18.84■□□□□ 0.61
USB1-202ENST00000423271 TBC1D8O95759 1140 aa18.84■□□□□ 0.61
USB1-202ENST00000423271 TNNI2P48788 182 aa18.84■□□□□ 0.61
USB1-202ENST00000423271 TIMM10P62072 90 aa18.84■□□□□ 0.61
USB1-202ENST00000423271 SREBF2Q12772 1141 aa18.84■□□□□ 0.61
USB1-202ENST00000423271 DIXDC1Q155Q3 683 aa18.84■□□□□ 0.61
USB1-202ENST00000423271 CCDC102BQ68D86 513 aa18.84■□□□□ 0.61
USB1-202ENST00000423271 HHIPL2Q6UWX4 724 aa18.84■□□□□ 0.61
USB1-202ENST00000423271 GNL3LQ9NVN8 582 aaKnown RBP18.84■□□□□ 0.61
USB1-202ENST00000423271 GJA5P36382 358 aa18.83■□□□□ 0.6
USB1-202ENST00000423271 DAGLAQ9Y4D2 1042 aa18.83■□□□□ 0.6
USB1-202ENST00000423271 A0A1B0GUL7 405 aa18.82■□□□□ 0.6
USB1-202ENST00000423271 UNCXA6NJT0 531 aa18.82■□□□□ 0.6
USB1-202ENST00000423271 ZBTB48P10074 688 aaPredicted RBP18.82■□□□□ 0.6
USB1-202ENST00000423271 ANKRD13AQ8IZ07 590 aa18.82■□□□□ 0.6
USB1-202ENST00000423271 ELP3Q9H9T3 547 aa18.82■□□□□ 0.6
USB1-202ENST00000423271 TMOD2Q9NZR1 351 aa18.82■□□□□ 0.6
USB1-202ENST00000423271 DENND2AQ9ULE3 1009 aa18.82■□□□□ 0.6
USB1-202ENST00000423271 SALL1Q9NSC2 1324 aa18.81■□□□□ 0.6
USB1-202ENST00000423271 MANSC4A6NHS7 340 aaPredicted RBP18.81■□□□□ 0.6
USB1-202ENST00000423271 CCDC85CA6NKD9 419 aa18.81■□□□□ 0.6
USB1-202ENST00000423271 SEMA3EO15041 775 aa18.81■□□□□ 0.6
USB1-202ENST00000423271 LDHBP07195 334 aaKnown RBP18.81■□□□□ 0.6
USB1-202ENST00000423271 RLBP1P12271 317 aa18.81■□□□□ 0.6
USB1-202ENST00000423271 RASGRF1Q13972 1273 aa18.81■□□□□ 0.6
USB1-202ENST00000423271 XAGE2Q96GT9 111 aa18.81■□□□□ 0.6
USB1-202ENST00000423271 R3HDMLQ9H3Y0 253 aa18.81■□□□□ 0.6
USB1-202ENST00000423271 C1orf115Q9H7X2 142 aa18.81■□□□□ 0.6
USB1-202ENST00000423271 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.8■□□□□ 0.6
USB1-202ENST00000423271 FAM83AQ86UY5 434 aa18.8■□□□□ 0.6
USB1-202ENST00000423271 FTSJ3Q8IY81 847 aaKnown RBP18.8■□□□□ 0.6
USB1-202ENST00000423271 ZNF296Q8WUU4 475 aaPredicted RBP18.8■□□□□ 0.6
USB1-202ENST00000423271 CNKSR2Q8WXI2 1034 aa18.8■□□□□ 0.6
USB1-202ENST00000423271 AKAP2Q9Y2D5 859 aa18.8■□□□□ 0.6
USB1-202ENST00000423271 MYH2Q9UKX2 1941 aa18.79■□□□□ 0.6
USB1-202ENST00000423271 IGF2BP3O00425 579 aaKnown RBP eCLIP18.79■□□□□ 0.6
USB1-202ENST00000423271 ZBTB22O15209 634 aa18.79■□□□□ 0.6
USB1-202ENST00000423271 VGLL4Q14135 290 aa18.79■□□□□ 0.6
USB1-202ENST00000423271 FKBP1CQ5VVH2 108 aa18.79■□□□□ 0.6
USB1-202ENST00000423271 CDC42EP5Q6NZY7 148 aa18.79■□□□□ 0.6
USB1-202ENST00000423271 IFNL1Q8IU54 200 aa18.79■□□□□ 0.6
USB1-202ENST00000423271 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.79■□□□□ 0.6
USB1-202ENST00000423271 OPTNQ96CV9 577 aa18.79■□□□□ 0.6
USB1-202ENST00000423271 RPAP1Q9BWH6 1393 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms