RNA–Protein interactions for RNA: ENST00000423048.5

ALMS1-201, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 1 (best)

Gene ALMS1, Length 5,194 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-201ENST00000423048 RETREG2Q8NC44 543 aa8.08□□□□□ -1.12
ALMS1-201ENST00000423048 PARP2Q9UGN5 583 aa8.08□□□□□ -1.12
ALMS1-201ENST00000423048 MKRN1Q9UHC7 482 aaKnown RBP8.08□□□□□ -1.12
ALMS1-201ENST00000423048 KDM3AQ9Y4C1 1321 aa8.08□□□□□ -1.12
ALMS1-201ENST00000423048 EYA2O00167 538 aa8.08□□□□□ -1.12
ALMS1-201ENST00000423048 CREB3L3Q68CJ9 461 aa8.08□□□□□ -1.12
ALMS1-201ENST00000423048 B4GALNT4Q76KP1 1039 aa8.08□□□□□ -1.12
ALMS1-201ENST00000423048 CCDC84Q86UT8 332 aaPredicted RBP8.08□□□□□ -1.12
ALMS1-201ENST00000423048 VSIG10Q8N0Z9 540 aa8.08□□□□□ -1.12
ALMS1-201ENST00000423048 MRFAP1L1Q96HT8 127 aa8.08□□□□□ -1.12
ALMS1-201ENST00000423048 SWAP70Q9UH65 585 aa8.08□□□□□ -1.12
ALMS1-201ENST00000423048 IGHDP01880 384 aa8.08□□□□□ -1.12
ALMS1-201ENST00000423048 ZNF76P36508 570 aa8.08□□□□□ -1.12
ALMS1-201ENST00000423048 TPRNQ4KMQ1 711 aa8.08□□□□□ -1.12
ALMS1-201ENST00000423048 CNNM4Q6P4Q7 775 aa8.08□□□□□ -1.12
ALMS1-201ENST00000423048 TRMT112Q9UI30 125 aaKnown RBP8.08□□□□□ -1.12
ALMS1-201ENST00000423048 PNPLA6Q8IY17 1366 aa8.08□□□□□ -1.12
ALMS1-201ENST00000423048 CTAGE9A4FU28 777 aa8.08□□□□□ -1.12
ALMS1-201ENST00000423048 ARHGAP6O43182 974 aa8.08□□□□□ -1.12
ALMS1-201ENST00000423048 HAUS3Q68CZ6 603 aa8.08□□□□□ -1.12
ALMS1-201ENST00000423048 HOMEZQ8IX15 550 aa8.08□□□□□ -1.12
ALMS1-201ENST00000423048 WDR66Q8TBY9 1149 aa8.08□□□□□ -1.12
ALMS1-201ENST00000423048 PIBF1Q8WXW3 757 aa8.08□□□□□ -1.12
ALMS1-201ENST00000423048 PCDHB15Q9Y5E8 787 aa8.08□□□□□ -1.12
ALMS1-201ENST00000423048 IGSF1Q8N6C5 1336 aa8.07□□□□□ -1.12
ALMS1-201ENST00000423048 PI4KAP2A4QPH2 592 aa8.07□□□□□ -1.12
ALMS1-201ENST00000423048 PSDA5PKW4 1024 aaPredicted RBP8.07□□□□□ -1.12
ALMS1-201ENST00000423048 BRD3Q15059 726 aa8.07□□□□□ -1.12
ALMS1-201ENST00000423048 POTEDQ86YR6 584 aa8.07□□□□□ -1.12
ALMS1-201ENST00000423048 PI4KAP1Q8N8J0 262 aa8.07□□□□□ -1.12
ALMS1-201ENST00000423048 KBTBD3Q8NAB2 608 aa8.07□□□□□ -1.12
ALMS1-201ENST00000423048 RNF214Q8ND24 703 aa8.07□□□□□ -1.12
ALMS1-201ENST00000423048 HAUS2Q9NVX0 235 aa8.07□□□□□ -1.12
ALMS1-201ENST00000423048 USP6P35125 1406 aa8.07□□□□□ -1.12
ALMS1-201ENST00000423048 N4BP1O75113 896 aaKnown RBP8.07□□□□□ -1.12
ALMS1-201ENST00000423048 BRD1O95696 1058 aa8.07□□□□□ -1.12
ALMS1-201ENST00000423048 ZNF853P0CG23 659 aa8.07□□□□□ -1.12
ALMS1-201ENST00000423048 LDHAL6AQ6ZMR3 332 aa8.07□□□□□ -1.12
ALMS1-201ENST00000423048 SYCE1Q8N0S2 351 aa8.07□□□□□ -1.12
ALMS1-201ENST00000423048 MPNDQ8N594 471 aa8.07□□□□□ -1.12
ALMS1-201ENST00000423048 C1orf115Q9H7X2 142 aa8.07□□□□□ -1.12
ALMS1-201ENST00000423048 FEZ2Q9UHY8 353 aaPredicted RBP8.07□□□□□ -1.12
ALMS1-201ENST00000423048 CEP83Q9Y592 693 aa8.07□□□□□ -1.12
ALMS1-201ENST00000423048 IDH1O75874 414 aaKnown RBP8.07□□□□□ -1.12
ALMS1-201ENST00000423048 TYRO3Q06418 890 aa8.07□□□□□ -1.12
ALMS1-201ENST00000423048 MCM10Q7L590 875 aa8.07□□□□□ -1.12
ALMS1-201ENST00000423048 RPGRQ92834 1020 aaKnown RBP8.07□□□□□ -1.12
ALMS1-201ENST00000423048 EXOC7Q9UPT5 735 aa8.07□□□□□ -1.12
ALMS1-201ENST00000423048 DDAH1O94760 285 aa8.07□□□□□ -1.12
ALMS1-201ENST00000423048 PUM3Q15397 648 aaKnown RBP8.07□□□□□ -1.12
ALMS1-201ENST00000423048 ALG1Q9BT22 464 aa8.07□□□□□ -1.12
ALMS1-201ENST00000423048 TANGO6Q9C0B7 1094 aa8.07□□□□□ -1.12
ALMS1-201ENST00000423048 MIS12Q9H081 205 aa8.07□□□□□ -1.12
ALMS1-201ENST00000423048 PLCB1Q9NQ66 1216 aa8.07□□□□□ -1.12
ALMS1-201ENST00000423048 TMOD4Q9NZQ9 345 aa8.07□□□□□ -1.12
ALMS1-201ENST00000423048 PDE8AO60658 829 aa8.06□□□□□ -1.12
ALMS1-201ENST00000423048 TBCAO75347 108 aaKnown RBP8.06□□□□□ -1.12
ALMS1-201ENST00000423048 KRT13P13646 458 aa8.06□□□□□ -1.12
ALMS1-201ENST00000423048 SCP2P22307 547 aa8.06□□□□□ -1.12
ALMS1-201ENST00000423048 EXOC8Q8IYI6 725 aa8.06□□□□□ -1.12
ALMS1-201ENST00000423048 LRRC59Q96AG4 307 aaKnown RBP8.06□□□□□ -1.12
ALMS1-201ENST00000423048 CARD14Q9BXL6 1004 aa8.06□□□□□ -1.12
ALMS1-201ENST00000423048 TPCN1Q9ULQ1 816 aa8.06□□□□□ -1.12
ALMS1-201ENST00000423048 UBASH3AP57075 661 aa8.06□□□□□ -1.12
ALMS1-201ENST00000423048 HDXQ7Z353 690 aa8.06□□□□□ -1.12
ALMS1-201ENST00000423048 PODNQ7Z5L7 613 aa8.06□□□□□ -1.12
ALMS1-201ENST00000423048 NUTM1Q86Y26 1132 aa8.06□□□□□ -1.12
ALMS1-201ENST00000423048 RRP36Q96EU6 259 aaKnown RBP8.06□□□□□ -1.12
ALMS1-201ENST00000423048 MTIF2P46199 727 aaKnown RBP8.06□□□□□ -1.12
ALMS1-201ENST00000423048 KCNJ6P48051 423 aa8.06□□□□□ -1.12
ALMS1-201ENST00000423048 NLRP12P59046 1061 aa8.06□□□□□ -1.12
ALMS1-201ENST00000423048 IKQ13123 557 aaPredicted RBP8.06□□□□□ -1.12
ALMS1-201ENST00000423048 CUL4AQ13619 759 aa8.06□□□□□ -1.12
ALMS1-201ENST00000423048 WHAMMP3Q1A5X7 153 aa8.06□□□□□ -1.12
ALMS1-201ENST00000423048 PLCD3Q8N3E9 789 aa8.06□□□□□ -1.12
ALMS1-201ENST00000423048 NUP133Q8WUM0 1156 aa8.06□□□□□ -1.12
ALMS1-201ENST00000423048 NT5C3AQ9H0P0 336 aa8.06□□□□□ -1.12
ALMS1-201ENST00000423048 COPRSQ9NQ92 184 aa8.06□□□□□ -1.12
ALMS1-201ENST00000423048 ALDH3A1P30838 453 aa8.06□□□□□ -1.12
ALMS1-201ENST00000423048 LMNB2Q03252 620 aa8.06□□□□□ -1.12
ALMS1-201ENST00000423048 MTX1Q13505 466 aa8.06□□□□□ -1.12
ALMS1-201ENST00000423048 GBP6Q6ZN66 633 aa8.06□□□□□ -1.12
ALMS1-201ENST00000423048 CCDC65Q8IXS2 484 aa8.06□□□□□ -1.12
ALMS1-201ENST00000423048 IKBKBO14920 756 aa8.05□□□□□ -1.12
ALMS1-201ENST00000423048 C10orf76Q5T2E6 689 aa8.05□□□□□ -1.12
ALMS1-201ENST00000423048 NUP88Q99567 741 aaPredicted RBP8.05□□□□□ -1.12
ALMS1-201ENST00000423048 BOLA2Q9H3K6 86 aa8.05□□□□□ -1.12
ALMS1-201ENST00000423048 IL1RAPL2Q9NP60 686 aa8.05□□□□□ -1.12
ALMS1-201ENST00000423048 ARPP21Q9UBL0 812 aaPredicted RBP8.05□□□□□ -1.12
ALMS1-201ENST00000423048 MTRF1LQ9UGC7 380 aaKnown RBP8.05□□□□□ -1.12
ALMS1-201ENST00000423048 DNAI1Q9UI46 699 aa8.05□□□□□ -1.12
ALMS1-201ENST00000423048 IQGAP1P46940 1657 aa8.05□□□□□ -1.12
ALMS1-201ENST00000423048 YWHAEP62258 255 aaKnown RBP8.05□□□□□ -1.12
ALMS1-201ENST00000423048 KIF5AQ12840 1032 aa8.05□□□□□ -1.12
ALMS1-201ENST00000423048 CDC37Q16543 378 aaPredicted RBP8.05□□□□□ -1.12
ALMS1-201ENST00000423048 KRT79Q5XKE5 535 aa8.05□□□□□ -1.12
ALMS1-201ENST00000423048 CCDC129Q6ZRS4 1044 aa8.05□□□□□ -1.12
ALMS1-201ENST00000423048 ARMC9Q7Z3E5 817 aa8.05□□□□□ -1.12
ALMS1-201ENST00000423048 ELOA2Q8IYF1 753 aaPredicted RBP8.05□□□□□ -1.12
ALMS1-201ENST00000423048 ANKS4BQ8N8V4 417 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms