RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 GRIK5Q16478 980 aa11.88□□□□□ -0.51
HERC3-204ENST00000422770 PRAMEF18Q5VWM3 479 aa11.88□□□□□ -0.51
HERC3-204ENST00000422770 APOBEC3FQ8IUX4 373 aaKnown RBP11.88□□□□□ -0.51
HERC3-204ENST00000422770 TEKT1Q969V4 418 aa11.88□□□□□ -0.51
HERC3-204ENST00000422770 KLRG1Q96E93 195 aa11.88□□□□□ -0.51
HERC3-204ENST00000422770 CDCA5Q96FF9 252 aa11.88□□□□□ -0.51
HERC3-204ENST00000422770 CCDC8Q9H0W5 538 aaPredicted RBP11.88□□□□□ -0.51
HERC3-204ENST00000422770 IL1RAPL2Q9NP60 686 aa11.88□□□□□ -0.51
HERC3-204ENST00000422770 PITPNM2Q9BZ72 1349 aa11.87□□□□□ -0.51
HERC3-204ENST00000422770 MAST2Q6P0Q8 1798 aa11.87□□□□□ -0.51
HERC3-204ENST00000422770 SPDYE2BA6NHP3 402 aa11.87□□□□□ -0.51
HERC3-204ENST00000422770 SEMA3EO15041 775 aa11.87□□□□□ -0.51
HERC3-204ENST00000422770 SPDYE6P0CI01 402 aa11.87□□□□□ -0.51
HERC3-204ENST00000422770 NF2P35240 595 aa11.87□□□□□ -0.51
HERC3-204ENST00000422770 RASGRF1Q13972 1273 aa11.87□□□□□ -0.51
HERC3-204ENST00000422770 CCDC158Q5M9N0 1113 aa11.87□□□□□ -0.51
HERC3-204ENST00000422770 AACSQ86V21 672 aa11.87□□□□□ -0.51
HERC3-204ENST00000422770 DZIP1Q86YF9 867 aaKnown RBP11.87□□□□□ -0.51
HERC3-204ENST00000422770 DBNDD2Q9BQY9 259 aa11.87□□□□□ -0.51
HERC3-204ENST00000422770 TDRD3Q9H7E2 651 aaKnown RBP11.87□□□□□ -0.51
HERC3-204ENST00000422770 TMOD2Q9NZR1 351 aa11.87□□□□□ -0.51
HERC3-204ENST00000422770 UQCRFS1P1P0C7P4 283 aa11.86□□□□□ -0.51
HERC3-204ENST00000422770 PRDX5P30044 214 aa11.86□□□□□ -0.51
HERC3-204ENST00000422770 PRKG1Q13976 671 aa11.86□□□□□ -0.51
HERC3-204ENST00000422770 DEFB115Q30KQ5 88 aa11.86□□□□□ -0.51
HERC3-204ENST00000422770 CST9Q5W186 159 aa11.86□□□□□ -0.51
HERC3-204ENST00000422770 PI16Q6UXB8 463 aa11.86□□□□□ -0.51
HERC3-204ENST00000422770 ZGPATQ8N5A5 531 aaKnown RBP11.86□□□□□ -0.51
HERC3-204ENST00000422770 C2orf69Q8N8R5 385 aa11.86□□□□□ -0.51
HERC3-204ENST00000422770 JMYQ8N9B5 988 aa11.86□□□□□ -0.51
HERC3-204ENST00000422770 PRMT6Q96LA8 375 aaPredicted RBP11.86□□□□□ -0.51
HERC3-204ENST00000422770 GBA2Q9HCG7 927 aaPredicted RBP11.86□□□□□ -0.51
HERC3-204ENST00000422770 SNRKQ9NRH2 765 aa11.86□□□□□ -0.51
HERC3-204ENST00000422770 TLR7Q9NYK1 1049 aaKnown RBP11.86□□□□□ -0.51
HERC3-204ENST00000422770 SERPINA10Q9UK55 444 aa11.86□□□□□ -0.51
HERC3-204ENST00000422770 NOP58Q9Y2X3 529 aaKnown RBP11.86□□□□□ -0.51
HERC3-204ENST00000422770 AKAP11Q9UKA4 1901 aa11.86□□□□□ -0.51
HERC3-204ENST00000422770 PAPPA2Q9BXP8 1791 aa11.85□□□□□ -0.51
HERC3-204ENST00000422770 CNTNAP1P78357 1384 aa11.85□□□□□ -0.51
HERC3-204ENST00000422770 TCP10L2B9ZVM9 353 aa11.85□□□□□ -0.51
HERC3-204ENST00000422770 IFIT2P09913 472 aaKnown RBP11.85□□□□□ -0.51
HERC3-204ENST00000422770 HUNKP57058 714 aa11.85□□□□□ -0.51
HERC3-204ENST00000422770 DIXDC1Q155Q3 683 aa11.85□□□□□ -0.51
HERC3-204ENST00000422770 SPTY2D1Q68D10 685 aaPredicted RBP11.85□□□□□ -0.51
HERC3-204ENST00000422770 SIRT2Q8IXJ6 389 aa11.85□□□□□ -0.51
HERC3-204ENST00000422770 CLASRPQ8N2M8 674 aaKnown RBP11.85□□□□□ -0.51
HERC3-204ENST00000422770 SPATA5Q8NB90 893 aa11.85□□□□□ -0.51
HERC3-204ENST00000422770 RHPN1Q8TCX5 695 aa11.85□□□□□ -0.51
HERC3-204ENST00000422770 KIF1BPQ96EK5 621 aa11.85□□□□□ -0.51
HERC3-204ENST00000422770 GPR108Q9NPR9 543 aa11.85□□□□□ -0.51
HERC3-204ENST00000422770 RAI14Q9P0K7 980 aa11.85□□□□□ -0.51
HERC3-204ENST00000422770 ZNF70Q9UC06 446 aaPredicted RBP11.85□□□□□ -0.51
HERC3-204ENST00000422770 AOX1Q06278 1338 aa11.85□□□□□ -0.51
HERC3-204ENST00000422770 ARID4AP29374 1257 aaPredicted RBP11.84□□□□□ -0.51
HERC3-204ENST00000422770 MCAMP43121 646 aa11.84□□□□□ -0.51
HERC3-204ENST00000422770 CACNB3P54284 484 aa11.84□□□□□ -0.51
HERC3-204ENST00000422770 TNFAIP1Q13829 316 aa11.84□□□□□ -0.51
HERC3-204ENST00000422770 CYP4F22Q6NT55 531 aa11.84□□□□□ -0.51
HERC3-204ENST00000422770 TBC1D9Q6ZT07 1266 aa11.84□□□□□ -0.51
HERC3-204ENST00000422770 ERICH6Q7L0X2 663 aa11.84□□□□□ -0.51
HERC3-204ENST00000422770 MTMR14Q8NCE2 650 aa11.84□□□□□ -0.51
HERC3-204ENST00000422770 EAF2Q96CJ1 260 aaPredicted RBP11.84□□□□□ -0.51
HERC3-204ENST00000422770 ZBED3Q96IU2 234 aaPredicted RBP11.84□□□□□ -0.51
HERC3-204ENST00000422770 HMG20BQ9P0W2 317 aa11.84□□□□□ -0.51
HERC3-204ENST00000422770 LRP2BPQ9P2M1 347 aa11.84□□□□□ -0.51
HERC3-204ENST00000422770 DBNLQ9UJU6 430 aaKnown RBP11.84□□□□□ -0.51
HERC3-204ENST00000422770 SUGT1Q9Y2Z0 365 aa11.84□□□□□ -0.51
HERC3-204ENST00000422770 TLL2Q9Y6L7 1015 aa11.84□□□□□ -0.51
HERC3-204ENST00000422770 RAB11FIP3O75154 756 aa11.83□□□□□ -0.52
HERC3-204ENST00000422770 TNNI2P48788 182 aa11.83□□□□□ -0.52
HERC3-204ENST00000422770 VEGFBP49765 207 aa11.83□□□□□ -0.52
HERC3-204ENST00000422770 HDLBPQ00341 1268 aaKnown RBP11.83□□□□□ -0.52
HERC3-204ENST00000422770 SPDYE2Q495Y8 402 aa11.83□□□□□ -0.52
HERC3-204ENST00000422770 SLF2Q8IX21 1173 aa11.83□□□□□ -0.52
HERC3-204ENST00000422770 CAPNS2Q96L46 248 aa11.83□□□□□ -0.52
HERC3-204ENST00000422770 DEFB129Q9H1M3 183 aa11.83□□□□□ -0.52
HERC3-204ENST00000422770 DOCK2Q92608 1830 aa11.83□□□□□ -0.52
HERC3-204ENST00000422770 SALL1Q9NSC2 1324 aa11.83□□□□□ -0.52
HERC3-204ENST00000422770 RASSF10A6NK89 507 aa11.82□□□□□ -0.52
HERC3-204ENST00000422770 SMARCA5O60264 1052 aaPredicted RBP11.82□□□□□ -0.52
HERC3-204ENST00000422770 ECE1P42892 770 aa11.82□□□□□ -0.52
HERC3-204ENST00000422770 RASA3Q14644 834 aa11.82□□□□□ -0.52
HERC3-204ENST00000422770 HHIPL2Q6UWX4 724 aa11.82□□□□□ -0.52
HERC3-204ENST00000422770 SAPCD2Q86UD0 394 aa11.82□□□□□ -0.52
HERC3-204ENST00000422770 ZDHHC15Q96MV8 337 aa11.82□□□□□ -0.52
HERC3-204ENST00000422770 NOL10Q9BSC4 688 aaKnown RBP11.82□□□□□ -0.52
HERC3-204ENST00000422770 LRRCC1Q9C099 1032 aa11.82□□□□□ -0.52
HERC3-204ENST00000422770 ZBTB47Q9UFB7 747 aaPredicted RBP11.82□□□□□ -0.52
HERC3-204ENST00000422770 DAGLAQ9Y4D2 1042 aa11.82□□□□□ -0.52
HERC3-204ENST00000422770 PDS5AQ29RF7 1337 aaKnown RBP11.82□□□□□ -0.52
HERC3-204ENST00000422770 WDR33Q9C0J8 1336 aaKnown RBP11.82□□□□□ -0.52
HERC3-204ENST00000422770 MYH7P12883 1935 aa11.82□□□□□ -0.52
HERC3-204ENST00000422770 OTOFQ9HC10 1997 aa11.81□□□□□ -0.52
HERC3-204ENST00000422770 UBE2Q2LH0YL09 131 aa11.81□□□□□ -0.52
HERC3-204ENST00000422770 ZAP70P43403 619 aa11.81□□□□□ -0.52
HERC3-204ENST00000422770 ZNF157P51786 506 aaPredicted RBP11.81□□□□□ -0.52
HERC3-204ENST00000422770 MECOMQ03112 1051 aa11.81□□□□□ -0.52
HERC3-204ENST00000422770 ERICH6BQ5W0A0 696 aa11.81□□□□□ -0.52
HERC3-204ENST00000422770 MOB2Q70IA6 237 aa11.81□□□□□ -0.52
HERC3-204ENST00000422770 ARMC9Q7Z3E5 817 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms