RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 PDE4DIPQ5VU43 2346 aa27.16■■□□□ 1.94
TRAF4-204ENST00000422344 UBE2Q2LH0YL09 131 aa27.15■■□□□ 1.94
TRAF4-204ENST00000422344 MS4A1P11836 297 aa27.15■■□□□ 1.94
TRAF4-204ENST00000422344 RLBP1P12271 317 aa27.15■■□□□ 1.94
TRAF4-204ENST00000422344 NF2P35240 595 aa27.15■■□□□ 1.94
TRAF4-204ENST00000422344 SOX10P56693 466 aa27.15■■□□□ 1.94
TRAF4-204ENST00000422344 GNL3LQ9NVN8 582 aaKnown RBP27.15■■□□□ 1.94
TRAF4-204ENST00000422344 SPDYE2BA6NHP3 402 aa27.14■■□□□ 1.94
TRAF4-204ENST00000422344 SPDYE6P0CI01 402 aa27.14■■□□□ 1.94
TRAF4-204ENST00000422344 CTU1Q7Z7A3 348 aaKnown RBP27.14■■□□□ 1.94
TRAF4-204ENST00000422344 SERPINA10Q9UK55 444 aa27.14■■□□□ 1.94
TRAF4-204ENST00000422344 TTLL12Q14166 644 aaPredicted RBP27.13■■□□□ 1.93
TRAF4-204ENST00000422344 AKAP2Q9Y2D5 859 aa27.13■■□□□ 1.93
TRAF4-204ENST00000422344 PNMA6EA0A0J9YXQ4 647 aa27.12■■□□□ 1.93
TRAF4-204ENST00000422344 PRMT6Q96LA8 375 aaPredicted RBP27.12■■□□□ 1.93
TRAF4-204ENST00000422344 PCDHAC2Q9Y5I4 1007 aa27.12■■□□□ 1.93
TRAF4-204ENST00000422344 CLRN2A0PK11 232 aa27.11■■□□□ 1.93
TRAF4-204ENST00000422344 G3BP1Q13283 466 aaKnown RBP eCLIP27.11■■□□□ 1.93
TRAF4-204ENST00000422344 WDR66Q8TBY9 1149 aa27.11■■□□□ 1.93
TRAF4-204ENST00000422344 PANK1Q8TE04 598 aa27.11■■□□□ 1.93
TRAF4-204ENST00000422344 C1orf115Q9H7X2 142 aa27.11■■□□□ 1.93
TRAF4-204ENST00000422344 VEZTQ9HBM0 779 aa27.11■■□□□ 1.93
TRAF4-204ENST00000422344 RCAN3Q9UKA8 241 aa27.11■■□□□ 1.93
TRAF4-204ENST00000422344 COL1A1P02452 1464 aaPredicted RBP27.11■■□□□ 1.93
TRAF4-204ENST00000422344 TFCP2Q12800 502 aa27.1■■□□□ 1.93
TRAF4-204ENST00000422344 ECM29Q5VYK3 1845 aa27.1■■□□□ 1.93
TRAF4-204ENST00000422344 MAST3O60307 1309 aa27.1■■□□□ 1.93
TRAF4-204ENST00000422344 MYH13Q9UKX3 1938 aa27.1■■□□□ 1.93
TRAF4-204ENST00000422344 ZBTB7BO15156 539 aaPredicted RBP27.09■■□□□ 1.93
TRAF4-204ENST00000422344 TBC1D8O95759 1140 aa27.09■■□□□ 1.93
TRAF4-204ENST00000422344 CRKP46108 304 aa27.09■■□□□ 1.93
TRAF4-204ENST00000422344 DEFB129Q9H1M3 183 aa27.09■■□□□ 1.93
TRAF4-204ENST00000422344 SUGT1Q9Y2Z0 365 aa27.09■■□□□ 1.93
TRAF4-204ENST00000422344 HDLBPQ00341 1268 aaKnown RBP27.08■■□□□ 1.93
TRAF4-204ENST00000422344 TEKT1Q969V4 418 aa27.08■■□□□ 1.93
TRAF4-204ENST00000422344 PPP2R3BQ9Y5P8 575 aa27.08■■□□□ 1.93
TRAF4-204ENST00000422344 A0A1B0GUL7 405 aa27.07■■□□□ 1.92
TRAF4-204ENST00000422344 SEMA3EO15041 775 aa27.07■■□□□ 1.92
TRAF4-204ENST00000422344 TIMM10P62072 90 aa27.07■■□□□ 1.92
TRAF4-204ENST00000422344 ATP8B2P98198 1209 aa27.07■■□□□ 1.92
TRAF4-204ENST00000422344 MKRN3Q13064 507 aaKnown RBP27.07■■□□□ 1.92
TRAF4-204ENST00000422344 OS9Q13438 667 aaPredicted RBP27.07■■□□□ 1.92
TRAF4-204ENST00000422344 GRIK5Q16478 980 aa27.07■■□□□ 1.92
TRAF4-204ENST00000422344 DENND2AQ9ULE3 1009 aa27.07■■□□□ 1.92
TRAF4-204ENST00000422344 ADORA1P30542 326 aa27.06■■□□□ 1.92
TRAF4-204ENST00000422344 PHKA1P46020 1223 aa27.06■■□□□ 1.92
TRAF4-204ENST00000422344 TNFAIP1Q13829 316 aa27.06■■□□□ 1.92
TRAF4-204ENST00000422344 CCDC102BQ68D86 513 aa27.06■■□□□ 1.92
TRAF4-204ENST00000422344 NEUROD6Q96NK8 337 aa27.06■■□□□ 1.92
TRAF4-204ENST00000422344 POLA2Q14181 598 aa27.05■■□□□ 1.92
TRAF4-204ENST00000422344 MVPQ14764 893 aaKnown RBP27.05■■□□□ 1.92
TRAF4-204ENST00000422344 SPDYE2Q495Y8 402 aa27.05■■□□□ 1.92
TRAF4-204ENST00000422344 SSH3Q8TE77 659 aa27.05■■□□□ 1.92
TRAF4-204ENST00000422344 ZNF296Q8WUU4 475 aaPredicted RBP27.05■■□□□ 1.92
TRAF4-204ENST00000422344 TDRD3Q9H7E2 651 aaKnown RBP27.05■■□□□ 1.92
TRAF4-204ENST00000422344 ZNF70Q9UC06 446 aaPredicted RBP27.05■■□□□ 1.92
TRAF4-204ENST00000422344 HPS5Q9UPZ3 1129 aa27.05■■□□□ 1.92
TRAF4-204ENST00000422344 TM4SF4P48230 202 aa27.04■■□□□ 1.92
TRAF4-204ENST00000422344 PRKG1Q13976 671 aa27.04■■□□□ 1.92
TRAF4-204ENST00000422344 GORABQ5T7V8 394 aa27.04■■□□□ 1.92
TRAF4-204ENST00000422344 ARMC9Q7Z3E5 817 aa27.04■■□□□ 1.92
TRAF4-204ENST00000422344 XAGE2Q96GT9 111 aa27.04■■□□□ 1.92
TRAF4-204ENST00000422344 AOX1Q06278 1338 aa27.04■■□□□ 1.92
TRAF4-204ENST00000422344 SURF6O75683 361 aaKnown RBP27.02■■□□□ 1.92
TRAF4-204ENST00000422344 SUPT20HL1Q3ZLR7 823 aa27.02■■□□□ 1.92
TRAF4-204ENST00000422344 MRIQ9BWK5 157 aa27.02■■□□□ 1.92
TRAF4-204ENST00000422344 TMOD2Q9NZR1 351 aa27.02■■□□□ 1.92
TRAF4-204ENST00000422344 LDHBP07195 334 aaKnown RBP27.01■■□□□ 1.91
TRAF4-204ENST00000422344 TNNI2P48788 182 aa27.01■■□□□ 1.91
TRAF4-204ENST00000422344 RASA3Q14644 834 aa27.01■■□□□ 1.91
TRAF4-204ENST00000422344 PKN2Q16513 984 aaKnown RBP27.01■■□□□ 1.91
TRAF4-204ENST00000422344 ZGPATQ8N5A5 531 aaKnown RBP27.01■■□□□ 1.91
TRAF4-204ENST00000422344 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.01■■□□□ 1.91
TRAF4-204ENST00000422344 ZDHHC15Q96MV8 337 aa27.01■■□□□ 1.91
TRAF4-204ENST00000422344 GPR25O00155 361 aa27■■□□□ 1.91
TRAF4-204ENST00000422344 HHIPL2Q6UWX4 724 aa27■■□□□ 1.91
TRAF4-204ENST00000422344 DDX19BQ9UMR2 479 aa27■■□□□ 1.91
TRAF4-204ENST00000422344 ANGEL1Q9UNK9 670 aaKnown RBP27■■□□□ 1.91
TRAF4-204ENST00000422344 SALL1Q9NSC2 1324 aa26.99■■□□□ 1.91
TRAF4-204ENST00000422344 TCP10L2B9ZVM9 353 aa26.99■■□□□ 1.91
TRAF4-204ENST00000422344 PPP1R12BO60237 982 aaPredicted RBP26.99■■□□□ 1.91
TRAF4-204ENST00000422344 SREBF2Q12772 1141 aa26.99■■□□□ 1.91
TRAF4-204ENST00000422344 CHMP4BQ9H444 224 aaKnown RBP26.99■■□□□ 1.91
TRAF4-204ENST00000422344 COG6Q9Y2V7 657 aa26.99■■□□□ 1.91
TRAF4-204ENST00000422344 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.99■■□□□ 1.91
TRAF4-204ENST00000422344 ZBTB22O15209 634 aa26.98■■□□□ 1.91
TRAF4-204ENST00000422344 PRDX5P30044 214 aa26.98■■□□□ 1.91
TRAF4-204ENST00000422344 RASGRF1Q13972 1273 aa26.98■■□□□ 1.91
TRAF4-204ENST00000422344 CEP85Q6P2H3 762 aa26.98■■□□□ 1.91
TRAF4-204ENST00000422344 PDS5AQ29RF7 1337 aaKnown RBP26.97■■□□□ 1.91
TRAF4-204ENST00000422344 NBPF12Q5TAG4 269 aaPredicted RBP26.97■■□□□ 1.91
TRAF4-204ENST00000422344 FZD1Q9UP38 647 aa26.97■■□□□ 1.91
TRAF4-204ENST00000422344 NOM1Q5C9Z4 860 aaKnown RBP26.96■■□□□ 1.91
TRAF4-204ENST00000422344 LDLRAD1Q5T700 205 aa26.96■■□□□ 1.91
TRAF4-204ENST00000422344 GPR108Q9NPR9 543 aa26.96■■□□□ 1.91
TRAF4-204ENST00000422344 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.96■■□□□ 1.91
TRAF4-204ENST00000422344 ABCF2Q9UG63 623 aa26.96■■□□□ 1.91
TRAF4-204ENST00000422344 SPRYD7Q5W111 196 aa26.95■■□□□ 1.9
TRAF4-204ENST00000422344 SPTY2D1Q68D10 685 aaPredicted RBP26.95■■□□□ 1.9
TRAF4-204ENST00000422344 APOBEC3HQ6NTF7 200 aaKnown RBP26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms