RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 PDE8BO95263 885 aa15.55■□□□□ 0.08
MCF2L-213ENST00000421756 CYP19A1P11511 503 aaPredicted RBP15.55■□□□□ 0.08
MCF2L-213ENST00000421756 NAA30Q147X3 362 aaPredicted RBP15.55■□□□□ 0.08
MCF2L-213ENST00000421756 ZSCAN16Q9H4T2 348 aaPredicted RBP15.55■□□□□ 0.08
MCF2L-213ENST00000421756 LMOD1P29536 600 aaPredicted RBP15.55■□□□□ 0.08
MCF2L-213ENST00000421756 CDC27P30260 824 aa15.55■□□□□ 0.08
MCF2L-213ENST00000421756 TSGA10IPQ3SY00 556 aa15.55■□□□□ 0.08
MCF2L-213ENST00000421756 TMX1Q9H3N1 280 aa15.55■□□□□ 0.08
MCF2L-213ENST00000421756 RASGRF1Q13972 1273 aa15.55■□□□□ 0.08
MCF2L-213ENST00000421756 TPD52L1Q16890 204 aaPredicted RBP15.55■□□□□ 0.08
MCF2L-213ENST00000421756 SLC51AQ86UW1 340 aa15.55■□□□□ 0.08
MCF2L-213ENST00000421756 UTRNP46939 3433 aa15.54■□□□□ 0.08
MCF2L-213ENST00000421756 PALLDQ8WX93 1383 aa15.54■□□□□ 0.08
MCF2L-213ENST00000421756 GOLGA8AA7E2F4 631 aa15.54■□□□□ 0.08
MCF2L-213ENST00000421756 GOLGA8FQ08AF8 430 aa15.54■□□□□ 0.08
MCF2L-213ENST00000421756 GOLGA8DPQ0D2H9 430 aa15.54■□□□□ 0.08
MCF2L-213ENST00000421756 SLC4A4Q9Y6R1 1079 aa15.54■□□□□ 0.08
MCF2L-213ENST00000421756 NEDD4P46934 1319 aa15.54■□□□□ 0.08
MCF2L-213ENST00000421756 LRRFIP1Q32MZ4 808 aaKnown RBP15.54■□□□□ 0.08
MCF2L-213ENST00000421756 DDB1Q16531 1140 aa15.53■□□□□ 0.08
MCF2L-213ENST00000421756 DPCR1Q3MIW9 517 aa15.53■□□□□ 0.08
MCF2L-213ENST00000421756 SPTLC2O15270 562 aa15.53■□□□□ 0.08
MCF2L-213ENST00000421756 PTF1AQ7RTS3 328 aa15.53■□□□□ 0.08
MCF2L-213ENST00000421756 FAM177A1Q8N128 213 aaPredicted RBP15.53■□□□□ 0.08
MCF2L-213ENST00000421756 SMARCC2Q8TAQ2 1214 aa15.53■□□□□ 0.08
MCF2L-213ENST00000421756 CACTINQ8WUQ7 758 aaKnown RBP15.53■□□□□ 0.08
MCF2L-213ENST00000421756 SPDYE4A6NLX3 237 aa15.52■□□□□ 0.08
MCF2L-213ENST00000421756 GUCY1A2P33402 732 aa15.52■□□□□ 0.08
MCF2L-213ENST00000421756 EVX2Q03828 476 aa15.52■□□□□ 0.08
MCF2L-213ENST00000421756 SPATA5Q8NB90 893 aa15.52■□□□□ 0.08
MCF2L-213ENST00000421756 HPS5Q9UPZ3 1129 aa15.52■□□□□ 0.08
MCF2L-213ENST00000421756 CCDC69A6NI79 296 aa15.52■□□□□ 0.08
MCF2L-213ENST00000421756 CRKLP46109 303 aaKnown RBP15.52■□□□□ 0.08
MCF2L-213ENST00000421756 ZNF75DP51815 510 aa15.52■□□□□ 0.08
MCF2L-213ENST00000421756 LCORLQ8N3X6 602 aa15.52■□□□□ 0.08
MCF2L-213ENST00000421756 TFCP2L1Q9NZI6 479 aa15.52■□□□□ 0.08
MCF2L-213ENST00000421756 RANBP6O60518 1105 aaKnown RBP15.52■□□□□ 0.07
MCF2L-213ENST00000421756 PDE8AO60658 829 aa15.52■□□□□ 0.07
MCF2L-213ENST00000421756 ADD2P35612 726 aa15.52■□□□□ 0.07
MCF2L-213ENST00000421756 MRPS27Q92552 414 aaKnown RBP15.52■□□□□ 0.07
MCF2L-213ENST00000421756 ZSWIM5Q9P217 1185 aa15.52■□□□□ 0.07
MCF2L-213ENST00000421756 SLC12A7Q9Y666 1083 aa15.52■□□□□ 0.07
MCF2L-213ENST00000421756 ZBTB43O43298 467 aa15.51■□□□□ 0.07
MCF2L-213ENST00000421756 COBLO75128 1261 aa15.51■□□□□ 0.07
MCF2L-213ENST00000421756 CIAO1O76071 339 aa15.51■□□□□ 0.07
MCF2L-213ENST00000421756 IARSP41252 1262 aaKnown RBP15.51■□□□□ 0.07
MCF2L-213ENST00000421756 TRIM29Q14134 588 aa15.51■□□□□ 0.07
MCF2L-213ENST00000421756 COL5A2P05997 1499 aaPredicted RBP15.51■□□□□ 0.07
MCF2L-213ENST00000421756 CYP7A1P22680 504 aa15.51■□□□□ 0.07
MCF2L-213ENST00000421756 NBPF3Q9H094 633 aa15.51■□□□□ 0.07
MCF2L-213ENST00000421756 SOS2Q07890 1332 aaPredicted RBP15.51■□□□□ 0.07
MCF2L-213ENST00000421756 TUBGCP6Q96RT7 1819 aa15.51■□□□□ 0.07
MCF2L-213ENST00000421756 ZNF827Q17R98 1081 aa15.51■□□□□ 0.07
MCF2L-213ENST00000421756 MYSM1Q5VVJ2 828 aa15.51■□□□□ 0.07
MCF2L-213ENST00000421756 KRT40Q6A162 431 aa15.51■□□□□ 0.07
MCF2L-213ENST00000421756 MB21D2Q8IYB1 491 aaPredicted RBP15.51■□□□□ 0.07
MCF2L-213ENST00000421756 FBXO18Q8NFZ0 1043 aa15.51■□□□□ 0.07
MCF2L-213ENST00000421756 ANGEL1Q9UNK9 670 aaKnown RBP15.51■□□□□ 0.07
MCF2L-213ENST00000421756 IGHMBP2P38935 993 aaKnown RBP15.5■□□□□ 0.07
MCF2L-213ENST00000421756 MAP3K12Q12852 859 aa15.5■□□□□ 0.07
MCF2L-213ENST00000421756 FAM98CQ17RN3 349 aaKnown RBP15.5■□□□□ 0.07
MCF2L-213ENST00000421756 ELP1O95163 1332 aa15.5■□□□□ 0.07
MCF2L-213ENST00000421756 USP27XA6NNY8 438 aa15.5■□□□□ 0.07
MCF2L-213ENST00000421756 BTBD18B2RXH4 712 aa15.5■□□□□ 0.07
MCF2L-213ENST00000421756 RIOK3O14730 519 aaKnown RBP15.5■□□□□ 0.07
MCF2L-213ENST00000421756 DHX16O60231 1041 aaKnown RBP15.5■□□□□ 0.07
MCF2L-213ENST00000421756 IGSF3O75054 1194 aa15.5■□□□□ 0.07
MCF2L-213ENST00000421756 FAM160A1Q05DH4 1040 aa15.5■□□□□ 0.07
MCF2L-213ENST00000421756 SNW1Q13573 536 aaKnown RBP15.5■□□□□ 0.07
MCF2L-213ENST00000421756 GRAMD1CQ8IYS0 662 aa15.5■□□□□ 0.07
MCF2L-213ENST00000421756 ZNF274Q96GC6 653 aaPredicted RBP15.5■□□□□ 0.07
MCF2L-213ENST00000421756 GPR108Q9NPR9 543 aa15.5■□□□□ 0.07
MCF2L-213ENST00000421756 ZFYP08048 801 aaPredicted RBP15.5■□□□□ 0.07
MCF2L-213ENST00000421756 SLC5A1P13866 664 aa15.5■□□□□ 0.07
MCF2L-213ENST00000421756 DYNLL1P63167 89 aaKnown RBP15.5■□□□□ 0.07
MCF2L-213ENST00000421756 IFNL3Q8IZI9 196 aa15.5■□□□□ 0.07
MCF2L-213ENST00000421756 TEX13AQ9BXU3 409 aaPredicted RBP15.5■□□□□ 0.07
MCF2L-213ENST00000421756 RCOR1Q9UKL0 485 aa15.5■□□□□ 0.07
MCF2L-213ENST00000421756 AFDNP55196 1824 aaKnown RBP15.49■□□□□ 0.07
MCF2L-213ENST00000421756 FOXN1O15353 648 aa15.49■□□□□ 0.07
MCF2L-213ENST00000421756 SLC3A2P08195 630 aaKnown RBP15.49■□□□□ 0.07
MCF2L-213ENST00000421756 NR5A1Q13285 461 aa15.49■□□□□ 0.07
MCF2L-213ENST00000421756 PNOCQ13519 176 aa15.49■□□□□ 0.07
MCF2L-213ENST00000421756 NAA16Q6N069 864 aaPredicted RBP15.49■□□□□ 0.07
MCF2L-213ENST00000421756 STAMQ92783 540 aa15.49■□□□□ 0.07
MCF2L-213ENST00000421756 WDHD1O75717 1129 aaPredicted RBP15.49■□□□□ 0.07
MCF2L-213ENST00000421756 ZNF202O95125 648 aa15.49■□□□□ 0.07
MCF2L-213ENST00000421756 CSF1RP07333 972 aa15.49■□□□□ 0.07
MCF2L-213ENST00000421756 CPLX2Q6PUV4 134 aaKnown RBP15.49■□□□□ 0.07
MCF2L-213ENST00000421756 MFSD6Q6ZSS7 791 aa15.49■□□□□ 0.07
MCF2L-213ENST00000421756 C3orf67Q6ZVT6 689 aa15.49■□□□□ 0.07
MCF2L-213ENST00000421756 KIAA1524Q8TCG1 905 aa15.49■□□□□ 0.07
MCF2L-213ENST00000421756 UTP14AQ9BVJ6 771 aaKnown RBP15.49■□□□□ 0.07
MCF2L-213ENST00000421756 TNNT1P13805 278 aa15.49■□□□□ 0.07
MCF2L-213ENST00000421756 CBX1P83916 185 aa15.49■□□□□ 0.07
MCF2L-213ENST00000421756 NKX1-1Q15270 411 aaPredicted RBP15.49■□□□□ 0.07
MCF2L-213ENST00000421756 PUM3Q15397 648 aaKnown RBP15.49■□□□□ 0.07
MCF2L-213ENST00000421756 STX1AQ16623 288 aa15.49■□□□□ 0.07
MCF2L-213ENST00000421756 ZSCAN25Q6NSZ9 544 aa15.49■□□□□ 0.07
MCF2L-213ENST00000421756 APOA5Q6Q788 366 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms