RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 SULF1Q8IWU6 871 aa19.27■□□□□ 0.68
BRAT1-202ENST00000421712 TEKT1Q969V4 418 aa19.27■□□□□ 0.68
BRAT1-202ENST00000421712 GLIS2Q9BZE0 524 aaPredicted RBP19.27■□□□□ 0.68
BRAT1-202ENST00000421712 SERPINA10Q9UK55 444 aa19.27■□□□□ 0.68
BRAT1-202ENST00000421712 PCDHAC2Q9Y5I4 1007 aa19.27■□□□□ 0.68
BRAT1-202ENST00000421712 PRDX5P30044 214 aa19.26■□□□□ 0.67
BRAT1-202ENST00000421712 TBC1D9Q6ZT07 1266 aa19.26■□□□□ 0.67
BRAT1-202ENST00000421712 KRT26Q7Z3Y9 468 aa19.26■□□□□ 0.67
BRAT1-202ENST00000421712 DZIP1Q86YF9 867 aaKnown RBP19.26■□□□□ 0.67
BRAT1-202ENST00000421712 GCC1Q96CN9 775 aa19.26■□□□□ 0.67
BRAT1-202ENST00000421712 PDS5AQ29RF7 1337 aaKnown RBP19.25■□□□□ 0.67
BRAT1-202ENST00000421712 SALL1Q9NSC2 1324 aa19.25■□□□□ 0.67
BRAT1-202ENST00000421712 ADAMTSL1Q8N6G6 1762 aa19.25■□□□□ 0.67
BRAT1-202ENST00000421712 ZBTB22O15209 634 aa19.25■□□□□ 0.67
BRAT1-202ENST00000421712 ITGBL1O95965 494 aaPredicted RBP19.25■□□□□ 0.67
BRAT1-202ENST00000421712 IFFO2Q5TF58 517 aa19.25■□□□□ 0.67
BRAT1-202ENST00000421712 ANKRD45Q5TZF3 282 aa19.25■□□□□ 0.67
BRAT1-202ENST00000421712 MTMR14Q8NCE2 650 aa19.25■□□□□ 0.67
BRAT1-202ENST00000421712 ZNF512BQ96KM6 892 aaPredicted RBP19.25■□□□□ 0.67
BRAT1-202ENST00000421712 PRMT6Q96LA8 375 aaPredicted RBP19.25■□□□□ 0.67
BRAT1-202ENST00000421712 RAI14Q9P0K7 980 aa19.25■□□□□ 0.67
BRAT1-202ENST00000421712 LRP2BPQ9P2M1 347 aa19.25■□□□□ 0.67
BRAT1-202ENST00000421712 SCAF8Q9UPN6 1271 aaKnown RBP19.25■□□□□ 0.67
BRAT1-202ENST00000421712 POLR2AP24928 1970 aaKnown RBP19.24■□□□□ 0.67
BRAT1-202ENST00000421712 SPDYE2BA6NHP3 402 aa19.24■□□□□ 0.67
BRAT1-202ENST00000421712 TRAF5O00463 557 aa19.24■□□□□ 0.67
BRAT1-202ENST00000421712 SPDYE6P0CI01 402 aa19.24■□□□□ 0.67
BRAT1-202ENST00000421712 HSPA6P17066 643 aa19.24■□□□□ 0.67
BRAT1-202ENST00000421712 ZAP70P43403 619 aa19.24■□□□□ 0.67
BRAT1-202ENST00000421712 HDLBPQ00341 1268 aaKnown RBP19.24■□□□□ 0.67
BRAT1-202ENST00000421712 ZNF408Q9H9D4 720 aa19.24■□□□□ 0.67
BRAT1-202ENST00000421712 CLRN2A0PK11 232 aa19.23■□□□□ 0.67
BRAT1-202ENST00000421712 ADM5C9JUS6 153 aa19.23■□□□□ 0.67
BRAT1-202ENST00000421712 SLF2Q8IX21 1173 aa19.23■□□□□ 0.67
BRAT1-202ENST00000421712 GPATCH3Q96I76 525 aa19.23■□□□□ 0.67
BRAT1-202ENST00000421712 MRIQ9BWK5 157 aa19.23■□□□□ 0.67
BRAT1-202ENST00000421712 TDRD3Q9H7E2 651 aaKnown RBP19.23■□□□□ 0.67
BRAT1-202ENST00000421712 VEZTQ9HBM0 779 aa19.23■□□□□ 0.67
BRAT1-202ENST00000421712 IGHDP01880 384 aa19.22■□□□□ 0.67
BRAT1-202ENST00000421712 APLP1P51693 650 aa19.22■□□□□ 0.67
BRAT1-202ENST00000421712 FMR1Q06787 632 aaKnown RBP eCLIP19.22■□□□□ 0.67
BRAT1-202ENST00000421712 DIXDC1Q155Q3 683 aa19.22■□□□□ 0.67
BRAT1-202ENST00000421712 B4GALNT3Q6L9W6 998 aa19.22■□□□□ 0.67
BRAT1-202ENST00000421712 HHIPL2Q6UWX4 724 aa19.22■□□□□ 0.67
BRAT1-202ENST00000421712 APOBEC3FQ8IUX4 373 aaKnown RBP19.22■□□□□ 0.67
BRAT1-202ENST00000421712 ZBED3Q96IU2 234 aaPredicted RBP19.22■□□□□ 0.67
BRAT1-202ENST00000421712 PITPNM2Q9BZ72 1349 aa19.22■□□□□ 0.67
BRAT1-202ENST00000421712 CYP2E1P05181 493 aaPredicted RBP19.21■□□□□ 0.67
BRAT1-202ENST00000421712 ZDHHC15Q96MV8 337 aa19.21■□□□□ 0.67
BRAT1-202ENST00000421712 DNAJC2Q99543 621 aaKnown RBP19.21■□□□□ 0.67
BRAT1-202ENST00000421712 BOLA2Q9H3K6 86 aa19.21■□□□□ 0.67
BRAT1-202ENST00000421712 NDUFB9Q9Y6M9 179 aa19.21■□□□□ 0.67
BRAT1-202ENST00000421712 PASKQ96RG2 1323 aa19.21■□□□□ 0.67
BRAT1-202ENST00000421712 CELF2O95319 508 aaKnown RBP19.2■□□□□ 0.66
BRAT1-202ENST00000421712 NEFLP07196 543 aa19.2■□□□□ 0.66
BRAT1-202ENST00000421712 GSTO1P78417 241 aa19.2■□□□□ 0.66
BRAT1-202ENST00000421712 MECOMQ03112 1051 aa19.2■□□□□ 0.66
BRAT1-202ENST00000421712 DLK2Q6UY11 383 aa19.2■□□□□ 0.66
BRAT1-202ENST00000421712 TMOD2Q9NZR1 351 aa19.2■□□□□ 0.66
BRAT1-202ENST00000421712 ZNF70Q9UC06 446 aaPredicted RBP19.2■□□□□ 0.66
BRAT1-202ENST00000421712 TMEM88BA6NKF7 163 aa19.19■□□□□ 0.66
BRAT1-202ENST00000421712 ECHDC1Q9NTX5 307 aa19.19■□□□□ 0.66
BRAT1-202ENST00000421712 DAGLAQ9Y4D2 1042 aa19.19■□□□□ 0.66
BRAT1-202ENST00000421712 TCP10L2B9ZVM9 353 aa19.18■□□□□ 0.66
BRAT1-202ENST00000421712 IDH1O75874 414 aaKnown RBP19.18■□□□□ 0.66
BRAT1-202ENST00000421712 LDHCP07864 332 aa19.18■□□□□ 0.66
BRAT1-202ENST00000421712 ATP5JP18859 108 aa19.18■□□□□ 0.66
BRAT1-202ENST00000421712 PRAMEF18Q5VWM3 479 aa19.18■□□□□ 0.66
BRAT1-202ENST00000421712 NAA16Q6N069 864 aaPredicted RBP19.18■□□□□ 0.66
BRAT1-202ENST00000421712 APOBEC3HQ6NTF7 200 aaKnown RBP19.18■□□□□ 0.66
BRAT1-202ENST00000421712 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.18■□□□□ 0.66
BRAT1-202ENST00000421712 PIH1D3Q9NQM4 214 aaKnown RBP19.18■□□□□ 0.66
BRAT1-202ENST00000421712 AOX1Q06278 1338 aa19.18■□□□□ 0.66
BRAT1-202ENST00000421712 AKAP11Q9UKA4 1901 aa19.17■□□□□ 0.66
BRAT1-202ENST00000421712 GOLIM4O00461 696 aa19.17■□□□□ 0.66
BRAT1-202ENST00000421712 HTRA3P83110 453 aa19.17■□□□□ 0.66
BRAT1-202ENST00000421712 TTF1Q15361 905 aaPredicted RBP19.17■□□□□ 0.66
BRAT1-202ENST00000421712 SPDYE2Q495Y8 402 aa19.17■□□□□ 0.66
BRAT1-202ENST00000421712 NSUN4Q96CB9 384 aaKnown RBP19.17■□□□□ 0.66
BRAT1-202ENST00000421712 CDCA5Q96FF9 252 aa19.17■□□□□ 0.66
BRAT1-202ENST00000421712 NOL10Q9BSC4 688 aaKnown RBP19.17■□□□□ 0.66
BRAT1-202ENST00000421712 DEFB129Q9H1M3 183 aa19.17■□□□□ 0.66
BRAT1-202ENST00000421712 ANTXR1Q9H6X2 564 aa19.17■□□□□ 0.66
BRAT1-202ENST00000421712 USP40Q9NVE5 1235 aa19.17■□□□□ 0.66
BRAT1-202ENST00000421712 ABT1Q9ULW3 272 aaKnown RBP19.17■□□□□ 0.66
BRAT1-202ENST00000421712 MYH2Q9UKX2 1941 aa19.16■□□□□ 0.66
BRAT1-202ENST00000421712 TNNI2P48788 182 aa19.16■□□□□ 0.66
BRAT1-202ENST00000421712 CACNB3P54284 484 aa19.16■□□□□ 0.66
BRAT1-202ENST00000421712 MAP3K12Q12852 859 aa19.16■□□□□ 0.66
BRAT1-202ENST00000421712 TNFAIP1Q13829 316 aa19.16■□□□□ 0.66
BRAT1-202ENST00000421712 TSHZ3Q63HK5 1081 aa19.16■□□□□ 0.66
BRAT1-202ENST00000421712 SMC5Q8IY18 1101 aa19.16■□□□□ 0.66
BRAT1-202ENST00000421712 LNPKQ9C0E8 428 aa19.16■□□□□ 0.66
BRAT1-202ENST00000421712 CREBZFQ9NS37 354 aa19.16■□□□□ 0.66
BRAT1-202ENST00000421712 NF2P35240 595 aa19.15■□□□□ 0.66
BRAT1-202ENST00000421712 BTDP43251 543 aa19.15■□□□□ 0.66
BRAT1-202ENST00000421712 CST9Q5W186 159 aa19.15■□□□□ 0.66
BRAT1-202ENST00000421712 CDC42EP5Q6NZY7 148 aa19.15■□□□□ 0.66
BRAT1-202ENST00000421712 HAUS7Q99871 368 aa19.15■□□□□ 0.66
BRAT1-202ENST00000421712 PAG1Q9NWQ8 432 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms