RNA–Protein interactions for RNA: ENST00000421517.5

FAM3A-209, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-209ENST00000421517 CCDC102AQ96A19 550 aa18.25■□□□□ 0.51
FAM3A-209ENST00000421517 F8W031 263 aaPredicted RBP18.24■□□□□ 0.51
FAM3A-209ENST00000421517 HMMRO75330 724 aa18.24■□□□□ 0.51
FAM3A-209ENST00000421517 ARID4AP29374 1257 aaPredicted RBP18.24■□□□□ 0.51
FAM3A-209ENST00000421517 MAP2K1Q02750 393 aaPredicted RBP18.24■□□□□ 0.51
FAM3A-209ENST00000421517 CHAF1AQ13111 956 aaPredicted RBP18.24■□□□□ 0.51
FAM3A-209ENST00000421517 CAPNS2Q96L46 248 aa18.24■□□□□ 0.51
FAM3A-209ENST00000421517 DEFB129Q9H1M3 183 aa18.24■□□□□ 0.51
FAM3A-209ENST00000421517 IQSEC3Q9UPP2 1182 aaPredicted RBP18.24■□□□□ 0.51
FAM3A-209ENST00000421517 JAG2Q9Y219 1238 aa18.24■□□□□ 0.51
FAM3A-209ENST00000421517 COG6Q9Y2V7 657 aa18.24■□□□□ 0.51
FAM3A-209ENST00000421517 PAPPA2Q9BXP8 1791 aa18.24■□□□□ 0.51
FAM3A-209ENST00000421517 POLR2AP24928 1970 aaKnown RBP18.23■□□□□ 0.51
FAM3A-209ENST00000421517 UQCRFS1P1P0C7P4 283 aa18.23■□□□□ 0.51
FAM3A-209ENST00000421517 RBM5P52756 815 aaKnown RBP eCLIP18.23■□□□□ 0.51
FAM3A-209ENST00000421517 HUNKP57058 714 aa18.23■□□□□ 0.51
FAM3A-209ENST00000421517 MAP3K11Q16584 847 aa18.23■□□□□ 0.51
FAM3A-209ENST00000421517 FAM163AQ96GL9 167 aaPredicted RBP18.23■□□□□ 0.51
FAM3A-209ENST00000421517 C1orf115Q9H7X2 142 aa18.23■□□□□ 0.51
FAM3A-209ENST00000421517 ZNF408Q9H9D4 720 aa18.23■□□□□ 0.51
FAM3A-209ENST00000421517 PCNTO95613 3336 aa18.22■□□□□ 0.51
FAM3A-209ENST00000421517 ADORA1P30542 326 aa18.22■□□□□ 0.51
FAM3A-209ENST00000421517 NOGQ13253 232 aa18.22■□□□□ 0.51
FAM3A-209ENST00000421517 SUPT20HL1Q3ZLR7 823 aa18.22■□□□□ 0.51
FAM3A-209ENST00000421517 TNNI3KQ59H18 835 aa18.22■□□□□ 0.51
FAM3A-209ENST00000421517 SPTY2D1Q68D10 685 aaPredicted RBP18.22■□□□□ 0.51
FAM3A-209ENST00000421517 RGMBQ6NW40 437 aa18.22■□□□□ 0.51
FAM3A-209ENST00000421517 REM2Q8IYK8 340 aaPredicted RBP18.22■□□□□ 0.51
FAM3A-209ENST00000421517 NEUROD6Q96NK8 337 aa18.22■□□□□ 0.51
FAM3A-209ENST00000421517 FPGT-TNNI3KV9GXZ4 949 aa18.22■□□□□ 0.51
FAM3A-209ENST00000421517 LDHBP07195 334 aaKnown RBP18.21■□□□□ 0.51
FAM3A-209ENST00000421517 TNNI2P48788 182 aa18.21■□□□□ 0.51
FAM3A-209ENST00000421517 RASGRF1Q13972 1273 aa18.21■□□□□ 0.51
FAM3A-209ENST00000421517 GRIK5Q16478 980 aa18.21■□□□□ 0.51
FAM3A-209ENST00000421517 APOBEC3HQ6NTF7 200 aaKnown RBP18.21■□□□□ 0.51
FAM3A-209ENST00000421517 FAM83AQ86UY5 434 aa18.21■□□□□ 0.51
FAM3A-209ENST00000421517 SLF2Q8IX21 1173 aa18.21■□□□□ 0.51
FAM3A-209ENST00000421517 WBP1LQ9NX94 342 aa18.21■□□□□ 0.51
FAM3A-209ENST00000421517 ZNF70Q9UC06 446 aaPredicted RBP18.21■□□□□ 0.51
FAM3A-209ENST00000421517 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.21■□□□□ 0.51
FAM3A-209ENST00000421517 OS9Q13438 667 aaPredicted RBP18.2■□□□□ 0.5
FAM3A-209ENST00000421517 CCDC158Q5M9N0 1113 aa18.2■□□□□ 0.5
FAM3A-209ENST00000421517 GORABQ5T7V8 394 aa18.2■□□□□ 0.5
FAM3A-209ENST00000421517 CYP4F22Q6NT55 531 aa18.2■□□□□ 0.5
FAM3A-209ENST00000421517 TMED8Q6PL24 325 aaPredicted RBP18.2■□□□□ 0.5
FAM3A-209ENST00000421517 MYH13Q9UKX3 1938 aa18.19■□□□□ 0.5
FAM3A-209ENST00000421517 RAB11FIP3O75154 756 aa18.19■□□□□ 0.5
FAM3A-209ENST00000421517 MAP4K4O95819 1239 aaPredicted RBP18.19■□□□□ 0.5
FAM3A-209ENST00000421517 DLK2Q6UY11 383 aa18.19■□□□□ 0.5
FAM3A-209ENST00000421517 PCDHAC2Q9Y5I4 1007 aa18.19■□□□□ 0.5
FAM3A-209ENST00000421517 RPAP1Q9BWH6 1393 aaPredicted RBP18.18■□□□□ 0.5
FAM3A-209ENST00000421517 FAM155AB1AL88 458 aaPredicted RBP18.18■□□□□ 0.5
FAM3A-209ENST00000421517 CA12O43570 354 aa18.18■□□□□ 0.5
FAM3A-209ENST00000421517 PPP1R12BO60237 982 aaPredicted RBP18.18■□□□□ 0.5
FAM3A-209ENST00000421517 HSPA1AP0DMV8 641 aaKnown RBP18.18■□□□□ 0.5
FAM3A-209ENST00000421517 HSPA1BP0DMV9 641 aaKnown RBP18.18■□□□□ 0.5
FAM3A-209ENST00000421517 PRDX5P30044 214 aa18.18■□□□□ 0.5
FAM3A-209ENST00000421517 RASA3Q14644 834 aa18.18■□□□□ 0.5
FAM3A-209ENST00000421517 LDLRAD1Q5T700 205 aa18.18■□□□□ 0.5
FAM3A-209ENST00000421517 ARMC9Q7Z3E5 817 aa18.18■□□□□ 0.5
FAM3A-209ENST00000421517 SIRT2Q8IXJ6 389 aa18.18■□□□□ 0.5
FAM3A-209ENST00000421517 SPATA5Q8NB90 893 aa18.18■□□□□ 0.5
FAM3A-209ENST00000421517 HOOK2Q96ED9 719 aa18.18■□□□□ 0.5
FAM3A-209ENST00000421517 TDRD3Q9H7E2 651 aaKnown RBP18.18■□□□□ 0.5
FAM3A-209ENST00000421517 TMOD2Q9NZR1 351 aa18.18■□□□□ 0.5
FAM3A-209ENST00000421517 HMG20BQ9P0W2 317 aa18.18■□□□□ 0.5
FAM3A-209ENST00000421517 GAKO14976 1311 aa18.18■□□□□ 0.5
FAM3A-209ENST00000421517 CLRN2A0PK11 232 aa18.17■□□□□ 0.5
FAM3A-209ENST00000421517 SLC10A3P09131 477 aa18.17■□□□□ 0.5
FAM3A-209ENST00000421517 C20orf194Q5TEA3 1177 aa18.17■□□□□ 0.5
FAM3A-209ENST00000421517 KIF1BPQ96EK5 621 aa18.17■□□□□ 0.5
FAM3A-209ENST00000421517 VEZTQ9HBM0 779 aa18.17■□□□□ 0.5
FAM3A-209ENST00000421517 ZNF157P51786 506 aaPredicted RBP18.16■□□□□ 0.5
FAM3A-209ENST00000421517 AAMPQ13685 434 aa18.16■□□□□ 0.5
FAM3A-209ENST00000421517 TEPSINQ96N21 525 aa18.16■□□□□ 0.5
FAM3A-209ENST00000421517 DAGLAQ9Y4D2 1042 aa18.16■□□□□ 0.5
FAM3A-209ENST00000421517 NPM3O75607 178 aaKnown RBP18.15■□□□□ 0.5
FAM3A-209ENST00000421517 MCAMP43121 646 aa18.15■□□□□ 0.5
FAM3A-209ENST00000421517 RRP1P56182 461 aaKnown RBP18.15■□□□□ 0.5
FAM3A-209ENST00000421517 GSTO1P78417 241 aa18.15■□□□□ 0.5
FAM3A-209ENST00000421517 PAXIP1Q6ZW49 1069 aaPredicted RBP18.15■□□□□ 0.5
FAM3A-209ENST00000421517 ERICH6Q7L0X2 663 aa18.15■□□□□ 0.5
FAM3A-209ENST00000421517 RHPN1Q8TCX5 695 aa18.15■□□□□ 0.5
FAM3A-209ENST00000421517 AIDAQ96BJ3 306 aa18.15■□□□□ 0.5
FAM3A-209ENST00000421517 EAF2Q96CJ1 260 aaPredicted RBP18.15■□□□□ 0.5
FAM3A-209ENST00000421517 AOX1Q06278 1338 aa18.15■□□□□ 0.5
FAM3A-209ENST00000421517 LDHCP07864 332 aa18.14■□□□□ 0.49
FAM3A-209ENST00000421517 TTC39AQ5SRH9 613 aa18.14■□□□□ 0.49
FAM3A-209ENST00000421517 CLASRPQ8N2M8 674 aaKnown RBP18.14■□□□□ 0.49
FAM3A-209ENST00000421517 DBNDD2Q9BQY9 259 aa18.14■□□□□ 0.49
FAM3A-209ENST00000421517 IDI2Q9BXS1 227 aa18.14■□□□□ 0.49
FAM3A-209ENST00000421517 DBNLQ9UJU6 430 aaKnown RBP18.14■□□□□ 0.49
FAM3A-209ENST00000421517 EXOC6BQ9Y2D4 811 aa18.14■□□□□ 0.49
FAM3A-209ENST00000421517 SSC5DA1L4H1 1573 aa18.13■□□□□ 0.49
FAM3A-209ENST00000421517 CTCFP49711 727 aaPredicted RBP18.13■□□□□ 0.49
FAM3A-209ENST00000421517 PRAMEF18Q5VWM3 479 aa18.13■□□□□ 0.49
FAM3A-209ENST00000421517 DZIP1Q86YF9 867 aaKnown RBP18.13■□□□□ 0.49
FAM3A-209ENST00000421517 RASAL3Q86YV0 1011 aa18.13■□□□□ 0.49
FAM3A-209ENST00000421517 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.13■□□□□ 0.49
FAM3A-209ENST00000421517 FAM151AQ8WW52 585 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms