RNA–Protein interactions for RNA: ENST00000421434.5

SCRN1-204, Transcript of secernin 1, humanhuman

TSL 3

Gene SCRN1, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-204ENST00000421434 TMEM39BQ9GZU3 492 aa11.84□□□□□ -0.51
SCRN1-204ENST00000421434 RIPOR2Q9Y4F9 1068 aa11.84□□□□□ -0.51
SCRN1-204ENST00000421434 CACNB3P54284 484 aa11.83□□□□□ -0.52
SCRN1-204ENST00000421434 SP3Q02447 781 aa11.83□□□□□ -0.52
SCRN1-204ENST00000421434 LRRC24Q50LG9 513 aa11.83□□□□□ -0.52
SCRN1-204ENST00000421434 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.83□□□□□ -0.52
SCRN1-204ENST00000421434 ERO1AQ96HE7 468 aa11.83□□□□□ -0.52
SCRN1-204ENST00000421434 TEPSINQ96N21 525 aa11.83□□□□□ -0.52
SCRN1-204ENST00000421434 BICC1Q9H694 974 aaKnown RBP11.83□□□□□ -0.52
SCRN1-204ENST00000421434 EFCC1Q9HA90 598 aa11.83□□□□□ -0.52
SCRN1-204ENST00000421434 PCDH10Q9P2E7 1040 aa11.83□□□□□ -0.52
SCRN1-204ENST00000421434 PTPN22Q9Y2R2 807 aa11.83□□□□□ -0.52
SCRN1-204ENST00000421434 TESPA1A2RU30 521 aaPredicted RBP11.82□□□□□ -0.52
SCRN1-204ENST00000421434 MAP3K9P80192 1104 aa11.82□□□□□ -0.52
SCRN1-204ENST00000421434 CAP1Q01518 475 aa11.82□□□□□ -0.52
SCRN1-204ENST00000421434 VGLL4Q14135 290 aa11.82□□□□□ -0.52
SCRN1-204ENST00000421434 METTL24Q5JXM2 366 aa11.82□□□□□ -0.52
SCRN1-204ENST00000421434 FBXO33Q7Z6M2 555 aa11.82□□□□□ -0.52
SCRN1-204ENST00000421434 MS4A4AQ96JQ5 239 aa11.82□□□□□ -0.52
SCRN1-204ENST00000421434 CENPFP49454 3210 aa11.82□□□□□ -0.52
SCRN1-204ENST00000421434 MROH5Q6ZUA9 1318 aa11.82□□□□□ -0.52
SCRN1-204ENST00000421434 HTTP42858 3142 aa11.81□□□□□ -0.52
SCRN1-204ENST00000421434 KIAA0100Q14667 2235 aaKnown RBP11.81□□□□□ -0.52
SCRN1-204ENST00000421434 TNNI2P48788 182 aa11.81□□□□□ -0.52
SCRN1-204ENST00000421434 BCAMP50895 628 aa11.81□□□□□ -0.52
SCRN1-204ENST00000421434 CAVIN4Q5BKX8 364 aa11.81□□□□□ -0.52
SCRN1-204ENST00000421434 INTS3Q68E01 1043 aaKnown RBP11.81□□□□□ -0.52
SCRN1-204ENST00000421434 KLHDC4Q8TBB5 520 aa11.81□□□□□ -0.52
SCRN1-204ENST00000421434 OTUD5Q96G74 571 aa11.81□□□□□ -0.52
SCRN1-204ENST00000421434 CACNA1FO60840 1977 aa11.81□□□□□ -0.52
SCRN1-204ENST00000421434 CCL15-CCL14A0A0B4J2E2 113 aa11.8□□□□□ -0.52
SCRN1-204ENST00000421434 EN2P19622 333 aaPredicted RBP11.8□□□□□ -0.52
SCRN1-204ENST00000421434 GTF2A2P52657 109 aa11.8□□□□□ -0.52
SCRN1-204ENST00000421434 TAF1CQ15572 869 aaPredicted RBP11.8□□□□□ -0.52
SCRN1-204ENST00000421434 CCL15Q16663 113 aa11.8□□□□□ -0.52
SCRN1-204ENST00000421434 ANKRD44Q8N8A2 993 aa11.8□□□□□ -0.52
SCRN1-204ENST00000421434 BRI3BPQ8WY22 251 aa11.8□□□□□ -0.52
SCRN1-204ENST00000421434 CSADQ9Y600 493 aa11.8□□□□□ -0.52
SCRN1-204ENST00000421434 MKI67P46013 3256 aaKnown RBP11.8□□□□□ -0.52
SCRN1-204ENST00000421434 ECM2O94769 699 aaPredicted RBP11.79□□□□□ -0.52
SCRN1-204ENST00000421434 PDE8BO95263 885 aa11.79□□□□□ -0.52
SCRN1-204ENST00000421434 MYCP01106 439 aaPredicted RBP11.79□□□□□ -0.52
SCRN1-204ENST00000421434 RABL6Q3YEC7 729 aaPredicted RBP11.79□□□□□ -0.52
SCRN1-204ENST00000421434 FAM43AQ8N2R8 423 aa11.79□□□□□ -0.52
SCRN1-204ENST00000421434 MRPL50Q8N5N7 158 aaKnown RBP11.79□□□□□ -0.52
SCRN1-204ENST00000421434 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.79□□□□□ -0.52
SCRN1-204ENST00000421434 TBC1D22AQ8WUA7 517 aa11.79□□□□□ -0.52
SCRN1-204ENST00000421434 ZKSCAN4Q969J2 545 aaPredicted RBP11.79□□□□□ -0.52
SCRN1-204ENST00000421434 TEKT1Q969V4 418 aa11.79□□□□□ -0.52
SCRN1-204ENST00000421434 ZFYVE28Q9HCC9 887 aa11.79□□□□□ -0.52
SCRN1-204ENST00000421434 UTYO14607 1347 aa11.79□□□□□ -0.52
SCRN1-204ENST00000421434 HDLBPQ00341 1268 aaKnown RBP11.78□□□□□ -0.52
SCRN1-204ENST00000421434 APOBEC3HQ6NTF7 200 aaKnown RBP11.78□□□□□ -0.52
SCRN1-204ENST00000421434 VGLL2Q8N8G2 317 aa11.78□□□□□ -0.52
SCRN1-204ENST00000421434 WRNIP1Q96S55 665 aa11.78□□□□□ -0.52
SCRN1-204ENST00000421434 ZNF316A6NFI3 1004 aaPredicted RBP11.77□□□□□ -0.53
SCRN1-204ENST00000421434 MIGA2Q7L4E1 593 aa11.77□□□□□ -0.53
SCRN1-204ENST00000421434 ARMC5Q96C12 935 aa11.77□□□□□ -0.53
SCRN1-204ENST00000421434 ZDHHC15Q96MV8 337 aa11.77□□□□□ -0.53
SCRN1-204ENST00000421434 TMEM106CQ9BVX2 250 aa11.77□□□□□ -0.53
SCRN1-204ENST00000421434 USP44Q9H0E7 712 aa11.77□□□□□ -0.53
SCRN1-204ENST00000421434 TMOD2Q9NZR1 351 aa11.77□□□□□ -0.53
SCRN1-204ENST00000421434 PTCH2Q9Y6C5 1203 aa11.77□□□□□ -0.53
SCRN1-204ENST00000421434 A0A1B0GUL6 1792 aa11.77□□□□□ -0.53
SCRN1-204ENST00000421434 ECM29Q5VYK3 1845 aa11.76□□□□□ -0.53
SCRN1-204ENST00000421434 SPDYE5A6NIY4 337 aa11.76□□□□□ -0.53
SCRN1-204ENST00000421434 BTBD19C9JJ37 291 aa11.76□□□□□ -0.53
SCRN1-204ENST00000421434 IRF6O14896 467 aa11.76□□□□□ -0.53
SCRN1-204ENST00000421434 IFIT1P09914 478 aaKnown RBP11.76□□□□□ -0.53
SCRN1-204ENST00000421434 CETPP11597 493 aa11.76□□□□□ -0.53
SCRN1-204ENST00000421434 ARHGEF6Q15052 776 aa11.76□□□□□ -0.53
SCRN1-204ENST00000421434 SLC4A8Q2Y0W8 1093 aa11.76□□□□□ -0.53
SCRN1-204ENST00000421434 SLC9C1Q4G0N8 1177 aa11.76□□□□□ -0.53
SCRN1-204ENST00000421434 NBPF11Q86T75 865 aa11.76□□□□□ -0.53
SCRN1-204ENST00000421434 ERO1BQ86YB8 467 aa11.76□□□□□ -0.53
SCRN1-204ENST00000421434 MRIQ9BWK5 157 aa11.76□□□□□ -0.53
SCRN1-204ENST00000421434 ARHGAP39Q9C0H5 1083 aa11.76□□□□□ -0.53
SCRN1-204ENST00000421434 SNCAIPQ9Y6H5 919 aa11.76□□□□□ -0.53
SCRN1-204ENST00000421434 BRCA2P51587 3418 aa11.76□□□□□ -0.53
SCRN1-204ENST00000421434 WDHD1O75717 1129 aaPredicted RBP11.75□□□□□ -0.53
SCRN1-204ENST00000421434 TCP10Q12799 353 aa11.75□□□□□ -0.53
SCRN1-204ENST00000421434 SNAPC2Q13487 334 aa11.75□□□□□ -0.53
SCRN1-204ENST00000421434 PUM3Q15397 648 aaKnown RBP11.75□□□□□ -0.53
SCRN1-204ENST00000421434 FAM83AQ86UY5 434 aa11.75□□□□□ -0.53
SCRN1-204ENST00000421434 SSH1Q8WYL5 1049 aa11.75□□□□□ -0.53
SCRN1-204ENST00000421434 GCC1Q96CN9 775 aa11.75□□□□□ -0.53
SCRN1-204ENST00000421434 ZNF333Q96JL9 665 aa11.75□□□□□ -0.53
SCRN1-204ENST00000421434 CEP290O15078 2479 aa11.74□□□□□ -0.53
SCRN1-204ENST00000421434 EYA2O00167 538 aa11.74□□□□□ -0.53
SCRN1-204ENST00000421434 TLR2O60603 784 aa11.74□□□□□ -0.53
SCRN1-204ENST00000421434 FGFR2P21802 821 aa11.74□□□□□ -0.53
SCRN1-204ENST00000421434 INPP5BP32019 993 aa11.74□□□□□ -0.53
SCRN1-204ENST00000421434 ZEB1P37275 1124 aaPredicted RBP11.74□□□□□ -0.53
SCRN1-204ENST00000421434 KIF22Q14807 665 aa11.74□□□□□ -0.53
SCRN1-204ENST00000421434 HABP4Q5JVS0 413 aaKnown RBP11.74□□□□□ -0.53
SCRN1-204ENST00000421434 DCAF15Q66K64 600 aa11.74□□□□□ -0.53
SCRN1-204ENST00000421434 SH3TC2Q8TF17 1288 aa11.74□□□□□ -0.53
SCRN1-204ENST00000421434 HOOK2Q96ED9 719 aa11.74□□□□□ -0.53
SCRN1-204ENST00000421434 MAST3O60307 1309 aa11.73□□□□□ -0.53
SCRN1-204ENST00000421434 PTPRCP08575 1304 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms