RNA–Protein interactions for RNA: ENST00000421230.6

PPFIA3-202, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 2,236 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-202ENST00000421230 C10orf71Q711Q0 1435 aa21.51■■□□□ 1.03
PPFIA3-202ENST00000421230 LRRC37AA6NMS7 1700 aa21.51■■□□□ 1.03
PPFIA3-202ENST00000421230 RNF113AO15541 343 aaKnown RBP21.51■■□□□ 1.03
PPFIA3-202ENST00000421230 STYK1Q6J9G0 422 aa21.51■■□□□ 1.03
PPFIA3-202ENST00000421230 ZNF589Q86UQ0 364 aaPredicted RBP21.51■■□□□ 1.03
PPFIA3-202ENST00000421230 TMEM87AQ8NBN3 555 aa21.51■■□□□ 1.03
PPFIA3-202ENST00000421230 MTFR1LQ9H019 292 aa21.51■■□□□ 1.03
PPFIA3-202ENST00000421230 POLLQ9UGP5 575 aa21.51■■□□□ 1.03
PPFIA3-202ENST00000421230 CCDC129Q6ZRS4 1044 aa21.51■■□□□ 1.03
PPFIA3-202ENST00000421230 USP48Q86UV5 1035 aa21.51■■□□□ 1.03
PPFIA3-202ENST00000421230 MYRIPQ8NFW9 859 aa21.51■■□□□ 1.03
PPFIA3-202ENST00000421230 LSG1Q9H089 658 aaKnown RBP21.51■■□□□ 1.03
PPFIA3-202ENST00000421230 ZNF219Q9P2Y4 722 aaPredicted RBP21.51■■□□□ 1.03
PPFIA3-202ENST00000421230 COL1A1P02452 1464 aaPredicted RBP21.5■■□□□ 1.03
PPFIA3-202ENST00000421230 EPB41L2O43491 1005 aaKnown RBP21.5■■□□□ 1.03
PPFIA3-202ENST00000421230 IDH1O75874 414 aaKnown RBP21.5■■□□□ 1.03
PPFIA3-202ENST00000421230 ATP2B4P23634 1241 aa21.5■■□□□ 1.03
PPFIA3-202ENST00000421230 TTF1Q15361 905 aaPredicted RBP21.5■■□□□ 1.03
PPFIA3-202ENST00000421230 PRPF40BQ6NWY9 871 aaKnown RBP21.5■■□□□ 1.03
PPFIA3-202ENST00000421230 TBC1D16Q8TBP0 767 aa21.5■■□□□ 1.03
PPFIA3-202ENST00000421230 C6orf229H3BNL8 230 aa21.49■■□□□ 1.03
PPFIA3-202ENST00000421230 PTH1RQ03431 593 aa21.49■■□□□ 1.03
PPFIA3-202ENST00000421230 SLX4Q8IY92 1834 aa21.49■■□□□ 1.03
PPFIA3-202ENST00000421230 WDR33Q9C0J8 1336 aaKnown RBP21.49■■□□□ 1.03
PPFIA3-202ENST00000421230 SMAP1Q8IYB5 467 aaPredicted RBP21.48■■□□□ 1.03
PPFIA3-202ENST00000421230 PIBF1Q8WXW3 757 aa21.48■■□□□ 1.03
PPFIA3-202ENST00000421230 MED23Q9ULK4 1368 aa21.48■■□□□ 1.03
PPFIA3-202ENST00000421230 MYH7P12883 1935 aa21.48■■□□□ 1.03
PPFIA3-202ENST00000421230 LTBP1Q14766 1721 aa21.48■■□□□ 1.03
PPFIA3-202ENST00000421230 RAD50Q92878 1312 aa21.48■■□□□ 1.03
PPFIA3-202ENST00000421230 A0A0G2JLW4 131 aa21.48■■□□□ 1.03
PPFIA3-202ENST00000421230 MCMDC2Q4G0Z9 681 aa21.48■■□□□ 1.03
PPFIA3-202ENST00000421230 ZMYM1Q5SVZ6 1142 aa21.48■■□□□ 1.03
PPFIA3-202ENST00000421230 WWC3Q9ULE0 1092 aa21.48■■□□□ 1.03
PPFIA3-202ENST00000421230 POLD1P28340 1107 aa21.47■■□□□ 1.03
PPFIA3-202ENST00000421230 WASHC4Q2M389 1173 aa21.47■■□□□ 1.03
PPFIA3-202ENST00000421230 SLC9C2Q5TAH2 1124 aa21.47■■□□□ 1.03
PPFIA3-202ENST00000421230 ILDR2Q71H61 639 aa21.47■■□□□ 1.03
PPFIA3-202ENST00000421230 MPNDQ8N594 471 aa21.47■■□□□ 1.03
PPFIA3-202ENST00000421230 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.47■■□□□ 1.03
PPFIA3-202ENST00000421230 GDPD2Q9HCC8 539 aa21.47■■□□□ 1.03
PPFIA3-202ENST00000421230 JAG2Q9Y219 1238 aa21.47■■□□□ 1.03
PPFIA3-202ENST00000421230 NOL8Q76FK4 1167 aaKnown RBP21.47■■□□□ 1.03
PPFIA3-202ENST00000421230 CNKSR1Q969H4 720 aa21.47■■□□□ 1.03
PPFIA3-202ENST00000421230 PRIMPOLQ96LW4 560 aa21.47■■□□□ 1.03
PPFIA3-202ENST00000421230 DENND2AQ9ULE3 1009 aa21.47■■□□□ 1.03
PPFIA3-202ENST00000421230 OSBP2Q969R2 916 aa21.46■■□□□ 1.03
PPFIA3-202ENST00000421230 TMX4Q9H1E5 349 aaPredicted RBP21.46■■□□□ 1.03
PPFIA3-202ENST00000421230 ABCF2Q9UG63 623 aa21.46■■□□□ 1.03
PPFIA3-202ENST00000421230 MYH13Q9UKX3 1938 aa21.46■■□□□ 1.03
PPFIA3-202ENST00000421230 RPAP1Q9BWH6 1393 aaPredicted RBP21.46■■□□□ 1.03
PPFIA3-202ENST00000421230 CCDC171Q6TFL3 1326 aa21.46■■□□□ 1.03
PPFIA3-202ENST00000421230 M0R2C6 588 aa21.45■■□□□ 1.03
PPFIA3-202ENST00000421230 DPEP1P16444 411 aa21.45■■□□□ 1.03
PPFIA3-202ENST00000421230 CHAF1AQ13111 956 aaPredicted RBP21.45■■□□□ 1.03
PPFIA3-202ENST00000421230 LRRFIP1Q32MZ4 808 aaKnown RBP21.45■■□□□ 1.03
PPFIA3-202ENST00000421230 CCDC183Q5T5S1 534 aa21.45■■□□□ 1.03
PPFIA3-202ENST00000421230 DPP8Q6V1X1 898 aaPredicted RBP21.45■■□□□ 1.03
PPFIA3-202ENST00000421230 HELLSQ9NRZ9 838 aa21.45■■□□□ 1.03
PPFIA3-202ENST00000421230 MAST3O60307 1309 aa21.45■■□□□ 1.02
PPFIA3-202ENST00000421230 RIMBP2O15034 1052 aa21.45■■□□□ 1.02
PPFIA3-202ENST00000421230 ZFYP08048 801 aaPredicted RBP21.45■■□□□ 1.02
PPFIA3-202ENST00000421230 GTF2F1P35269 517 aaKnown RBP eCLIP21.45■■□□□ 1.02
PPFIA3-202ENST00000421230 ADD2P35612 726 aa21.45■■□□□ 1.02
PPFIA3-202ENST00000421230 C15orf52Q6ZUT6 534 aaKnown RBP21.45■■□□□ 1.02
PPFIA3-202ENST00000421230 ZNF804AQ7Z570 1209 aa21.45■■□□□ 1.02
PPFIA3-202ENST00000421230 TICAM2Q86XR7 235 aa21.45■■□□□ 1.02
PPFIA3-202ENST00000421230 UPF3BQ9BZI7 483 aaKnown RBP21.45■■□□□ 1.02
PPFIA3-202ENST00000421230 LETM1O95202 739 aaPredicted RBP21.44■■□□□ 1.02
PPFIA3-202ENST00000421230 PDE6AP16499 860 aa21.44■■□□□ 1.02
PPFIA3-202ENST00000421230 HSPA4P34932 840 aa21.44■■□□□ 1.02
PPFIA3-202ENST00000421230 LRP2BPQ9P2M1 347 aa21.44■■□□□ 1.02
PPFIA3-202ENST00000421230 PPP1R1BQ9UD71 204 aaPredicted RBP21.44■■□□□ 1.02
PPFIA3-202ENST00000421230 DOCK2Q92608 1830 aa21.44■■□□□ 1.02
PPFIA3-202ENST00000421230 DUOX1Q9NRD9 1551 aa21.44■■□□□ 1.02
PPFIA3-202ENST00000421230 SEMA3EO15041 775 aa21.44■■□□□ 1.02
PPFIA3-202ENST00000421230 MAP3K12Q12852 859 aa21.44■■□□□ 1.02
PPFIA3-202ENST00000421230 NOLC1Q14978 699 aaKnown RBP eCLIP21.44■■□□□ 1.02
PPFIA3-202ENST00000421230 ZSCAN25Q6NSZ9 544 aa21.44■■□□□ 1.02
PPFIA3-202ENST00000421230 MAGEB6Q8N7X4 407 aa21.44■■□□□ 1.02
PPFIA3-202ENST00000421230 CCDC94Q9BW85 323 aaPredicted RBP21.44■■□□□ 1.02
PPFIA3-202ENST00000421230 PUS7LQ9H0K6 701 aaKnown RBP21.44■■□□□ 1.02
PPFIA3-202ENST00000421230 ZNF532Q9HCE3 1301 aa21.43■■□□□ 1.02
PPFIA3-202ENST00000421230 KCNA3P22001 575 aa21.43■■□□□ 1.02
PPFIA3-202ENST00000421230 HMGN5P82970 282 aaKnown RBP21.43■■□□□ 1.02
PPFIA3-202ENST00000421230 KLHL34Q8N239 644 aa21.43■■□□□ 1.02
PPFIA3-202ENST00000421230 KIF13BQ9NQT8 1826 aa21.43■■□□□ 1.02
PPFIA3-202ENST00000421230 APPBP2Q92624 585 aa21.43■■□□□ 1.02
PPFIA3-202ENST00000421230 SPTLC3Q9NUV7 552 aa21.43■■□□□ 1.02
PPFIA3-202ENST00000421230 USP25Q9UHP3 1055 aa21.43■■□□□ 1.02
PPFIA3-202ENST00000421230 DLEC1Q9Y238 1755 aa21.42■■□□□ 1.02
PPFIA3-202ENST00000421230 FOXD4L6Q3SYB3 417 aaPredicted RBP21.42■■□□□ 1.02
PPFIA3-202ENST00000421230 VPS53Q5VIR6 699 aa21.42■■□□□ 1.02
PPFIA3-202ENST00000421230 FOXD4L3Q6VB84 417 aaPredicted RBP21.42■■□□□ 1.02
PPFIA3-202ENST00000421230 TDRD7Q8NHU6 1098 aaKnown RBP21.42■■□□□ 1.02
PPFIA3-202ENST00000421230 C7orf43Q8WVR3 580 aa21.42■■□□□ 1.02
PPFIA3-202ENST00000421230 MAP4K1Q92918 833 aa21.42■■□□□ 1.02
PPFIA3-202ENST00000421230 CD209Q9NNX6 404 aa21.42■■□□□ 1.02
PPFIA3-202ENST00000421230 TCRBV5S4A2TA0A5A2 114 aa21.41■■□□□ 1.02
PPFIA3-202ENST00000421230 ADCY5O95622 1261 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms