RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 ZRANB1Q9UGI0 708 aa13.89□□□□□ -0.19
CLCN4-203ENST00000421085 HGSO14964 777 aaPredicted RBP13.89□□□□□ -0.19
CLCN4-203ENST00000421085 TRIM14Q14142 442 aa13.89□□□□□ -0.19
CLCN4-203ENST00000421085 CABS1Q96KC9 395 aa13.89□□□□□ -0.19
CLCN4-203ENST00000421085 CDC5LQ99459 802 aaKnown RBP13.89□□□□□ -0.19
CLCN4-203ENST00000421085 NOC4LQ9BVI4 516 aaKnown RBP13.89□□□□□ -0.19
CLCN4-203ENST00000421085 RAPGEF1Q13905 1077 aa13.88□□□□□ -0.19
CLCN4-203ENST00000421085 KRT79Q5XKE5 535 aa13.88□□□□□ -0.19
CLCN4-203ENST00000421085 RAB3IL1Q8TBN0 382 aa13.88□□□□□ -0.19
CLCN4-203ENST00000421085 KDM2BQ8NHM5 1336 aa13.88□□□□□ -0.19
CLCN4-203ENST00000421085 RNF113AO15541 343 aaKnown RBP13.88□□□□□ -0.19
CLCN4-203ENST00000421085 VAMP4O75379 141 aa13.88□□□□□ -0.19
CLCN4-203ENST00000421085 TMEM63CQ9P1W3 806 aa13.88□□□□□ -0.19
CLCN4-203ENST00000421085 ALDH1L1O75891 902 aa13.88□□□□□ -0.19
CLCN4-203ENST00000421085 RPS6KB1P23443 525 aa13.88□□□□□ -0.19
CLCN4-203ENST00000421085 ARL1P40616 181 aaPredicted RBP13.88□□□□□ -0.19
CLCN4-203ENST00000421085 GNAQP50148 359 aa13.88□□□□□ -0.19
CLCN4-203ENST00000421085 TPD52P55327 224 aaPredicted RBP13.88□□□□□ -0.19
CLCN4-203ENST00000421085 ATP2B3Q16720 1220 aa13.88□□□□□ -0.19
CLCN4-203ENST00000421085 DTHD1Q6ZMT9 781 aa13.88□□□□□ -0.19
CLCN4-203ENST00000421085 CABP5Q9NP86 173 aa13.88□□□□□ -0.19
CLCN4-203ENST00000421085 ZNF500O60304 480 aaPredicted RBP13.88□□□□□ -0.19
CLCN4-203ENST00000421085 LONRF3Q496Y0 759 aa13.88□□□□□ -0.19
CLCN4-203ENST00000421085 SEL1L2Q5TEA6 688 aa13.88□□□□□ -0.19
CLCN4-203ENST00000421085 GIGYF1O75420 1035 aaPredicted RBP13.88□□□□□ -0.19
CLCN4-203ENST00000421085 ATP2A2P16615 1042 aaKnown RBP13.88□□□□□ -0.19
CLCN4-203ENST00000421085 TBC1D8BQ0IIM8 1120 aa13.88□□□□□ -0.19
CLCN4-203ENST00000421085 VWA3AA6NCI4 1184 aa13.87□□□□□ -0.19
CLCN4-203ENST00000421085 SNRPA1P09661 255 aaKnown RBP13.87□□□□□ -0.19
CLCN4-203ENST00000421085 CALML3P27482 149 aa13.87□□□□□ -0.19
CLCN4-203ENST00000421085 LMBR1LQ6UX01 489 aa13.87□□□□□ -0.19
CLCN4-203ENST00000421085 ARHGAP6O43182 974 aa13.87□□□□□ -0.19
CLCN4-203ENST00000421085 ANKLE2Q86XL3 938 aa13.87□□□□□ -0.19
CLCN4-203ENST00000421085 XAGE3Q8WTP9 111 aa13.87□□□□□ -0.19
CLCN4-203ENST00000421085 UTP11Q9Y3A2 253 aaKnown RBP13.87□□□□□ -0.19
CLCN4-203ENST00000421085 RTL9Q8NET4 1388 aa13.87□□□□□ -0.19
CLCN4-203ENST00000421085 IL15P40933 162 aaPredicted RBP13.87□□□□□ -0.19
CLCN4-203ENST00000421085 CFAP157Q5JU67 520 aa13.87□□□□□ -0.19
CLCN4-203ENST00000421085 KIAA1524Q8TCG1 905 aa13.87□□□□□ -0.19
CLCN4-203ENST00000421085 C6orf50Q9HD87 102 aa13.87□□□□□ -0.19
CLCN4-203ENST00000421085 NOS1P29475 1434 aa13.86□□□□□ -0.19
CLCN4-203ENST00000421085 E7EVH7 732 aa13.86□□□□□ -0.19
CLCN4-203ENST00000421085 LEO1Q8WVC0 666 aaPredicted RBP13.86□□□□□ -0.19
CLCN4-203ENST00000421085 SECISBP2LQ93073 1101 aaKnown RBP13.86□□□□□ -0.19
CLCN4-203ENST00000421085 KCNH3Q9ULD8 1083 aa13.86□□□□□ -0.19
CLCN4-203ENST00000421085 ARID4AP29374 1257 aaPredicted RBP13.86□□□□□ -0.19
CLCN4-203ENST00000421085 NLRP12P59046 1061 aa13.86□□□□□ -0.19
CLCN4-203ENST00000421085 ANO1Q5XXA6 986 aa13.86□□□□□ -0.19
CLCN4-203ENST00000421085 CCDC110Q8TBZ0 833 aa13.86□□□□□ -0.19
CLCN4-203ENST00000421085 RAD50Q92878 1312 aa13.86□□□□□ -0.19
CLCN4-203ENST00000421085 CALM1P0DP23 149 aa13.86□□□□□ -0.19
CLCN4-203ENST00000421085 CALM2P0DP24 149 aa13.86□□□□□ -0.19
CLCN4-203ENST00000421085 CALM3P0DP25 149 aa13.86□□□□□ -0.19
CLCN4-203ENST00000421085 TSNAXIP1Q2TAA8 658 aa13.86□□□□□ -0.19
CLCN4-203ENST00000421085 OTUD7AQ8TE49 926 aaPredicted RBP13.86□□□□□ -0.19
CLCN4-203ENST00000421085 IQSEC3Q9UPP2 1182 aaPredicted RBP13.86□□□□□ -0.19
CLCN4-203ENST00000421085 SNX14Q9Y5W7 946 aa13.86□□□□□ -0.19
CLCN4-203ENST00000421085 MAPKBP1O60336 1514 aa13.86□□□□□ -0.19
CLCN4-203ENST00000421085 SF3A3Q12874 501 aaKnown RBP eCLIP13.86□□□□□ -0.19
CLCN4-203ENST00000421085 FYB2Q5VWT5 728 aa13.86□□□□□ -0.19
CLCN4-203ENST00000421085 KSR2Q6VAB6 950 aa13.86□□□□□ -0.19
CLCN4-203ENST00000421085 COPS6Q7L5N1 327 aa13.86□□□□□ -0.19
CLCN4-203ENST00000421085 RPGRQ92834 1020 aaKnown RBP13.86□□□□□ -0.19
CLCN4-203ENST00000421085 PPFIA1Q13136 1202 aa13.86□□□□□ -0.19
CLCN4-203ENST00000421085 ZNF174Q15697 407 aa13.86□□□□□ -0.19
CLCN4-203ENST00000421085 UAP1Q16222 522 aaPredicted RBP13.86□□□□□ -0.19
CLCN4-203ENST00000421085 DCAF17Q5H9S7 520 aaPredicted RBP13.86□□□□□ -0.19
CLCN4-203ENST00000421085 ZBTB7BO15156 539 aaPredicted RBP13.85□□□□□ -0.19
CLCN4-203ENST00000421085 RUFY4Q6ZNE9 571 aa13.85□□□□□ -0.19
CLCN4-203ENST00000421085 SND1Q7KZF4 910 aaKnown RBP eCLIP13.85□□□□□ -0.19
CLCN4-203ENST00000421085 GPR161Q8N6U8 529 aaKnown RBP13.85□□□□□ -0.19
CLCN4-203ENST00000421085 ARHGEF2Q92974 986 aaKnown RBP13.85□□□□□ -0.19
CLCN4-203ENST00000421085 MTX1Q13505 466 aa13.85□□□□□ -0.19
CLCN4-203ENST00000421085 SYNRGQ9UMZ2 1314 aa13.85□□□□□ -0.19
CLCN4-203ENST00000421085 SOS1Q07889 1333 aaPredicted RBP13.85□□□□□ -0.19
CLCN4-203ENST00000421085 HLA-DOAP06340 250 aa13.85□□□□□ -0.19
CLCN4-203ENST00000421085 PABPN1LA6NDY0 278 aaKnown RBP13.85□□□□□ -0.19
CLCN4-203ENST00000421085 ACTN4O43707 911 aaKnown RBP13.85□□□□□ -0.19
CLCN4-203ENST00000421085 ZNF131P52739 623 aa13.85□□□□□ -0.19
CLCN4-203ENST00000421085 ERCC6LQ2NKX8 1250 aa13.85□□□□□ -0.19
CLCN4-203ENST00000421085 GKAP1Q5VSY0 366 aaPredicted RBP13.85□□□□□ -0.19
CLCN4-203ENST00000421085 IFNL2Q8IZJ0 200 aa13.85□□□□□ -0.19
CLCN4-203ENST00000421085 LRRC45Q96CN5 670 aa13.85□□□□□ -0.19
CLCN4-203ENST00000421085 TRIM31Q9BZY9 425 aa13.85□□□□□ -0.19
CLCN4-203ENST00000421085 BAIAP2L1Q9UHR4 511 aa13.85□□□□□ -0.19
CLCN4-203ENST00000421085 FAM13AO94988 1023 aa13.85□□□□□ -0.19
CLCN4-203ENST00000421085 RPUSD2Q8IZ73 545 aaKnown RBP13.85□□□□□ -0.19
CLCN4-203ENST00000421085 GDAP1L1Q96MZ0 367 aa13.85□□□□□ -0.19
CLCN4-203ENST00000421085 TXNDC16Q9P2K2 825 aa13.85□□□□□ -0.19
CLCN4-203ENST00000421085 MAPK8IP1Q9UQF2 711 aa13.85□□□□□ -0.19
CLCN4-203ENST00000421085 VSIG1Q86XK7 387 aa13.84□□□□□ -0.19
CLCN4-203ENST00000421085 SLC27A2O14975 620 aa13.84□□□□□ -0.19
CLCN4-203ENST00000421085 MRRFQ96E11 262 aaKnown RBP13.84□□□□□ -0.19
CLCN4-203ENST00000421085 NOX5Q96PH1 765 aa13.84□□□□□ -0.19
CLCN4-203ENST00000421085 C14orf93Q9H972 538 aaKnown RBP13.84□□□□□ -0.19
CLCN4-203ENST00000421085 CAPN7Q9Y6W3 813 aa13.84□□□□□ -0.19
CLCN4-203ENST00000421085 POLR3AO14802 1390 aaPredicted RBP13.84□□□□□ -0.19
CLCN4-203ENST00000421085 C6orf229H3BNL8 230 aa13.84□□□□□ -0.19
CLCN4-203ENST00000421085 PSMB7Q99436 277 aa13.84□□□□□ -0.19
CLCN4-203ENST00000421085 POLR2DO15514 142 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms