RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 PKN2Q16513 984 aaKnown RBP21.75■■□□□ 1.07
MSH6-203ENST00000420813 TDRD3Q9H7E2 651 aaKnown RBP21.75■■□□□ 1.07
MSH6-203ENST00000420813 GPR25O00155 361 aa21.74■■□□□ 1.07
MSH6-203ENST00000420813 FRAT2O75474 233 aaPredicted RBP21.74■■□□□ 1.07
MSH6-203ENST00000420813 FGFR2P21802 821 aa21.74■■□□□ 1.07
MSH6-203ENST00000420813 RFX5P48382 616 aaPredicted RBP21.74■■□□□ 1.07
MSH6-203ENST00000420813 WNK4Q96J92 1243 aa21.74■■□□□ 1.07
MSH6-203ENST00000420813 CLMNQ96JQ2 1002 aa21.74■■□□□ 1.07
MSH6-203ENST00000420813 IQSEC3Q9UPP2 1182 aaPredicted RBP21.74■■□□□ 1.07
MSH6-203ENST00000420813 CCER2I3L3R5 266 aa21.73■■□□□ 1.07
MSH6-203ENST00000420813 EYA2O00167 538 aa21.73■■□□□ 1.07
MSH6-203ENST00000420813 USP2O75604 605 aaPredicted RBP21.73■■□□□ 1.07
MSH6-203ENST00000420813 IFIT1P09914 478 aaKnown RBP21.73■■□□□ 1.07
MSH6-203ENST00000420813 CHAF1AQ13111 956 aaPredicted RBP21.73■■□□□ 1.07
MSH6-203ENST00000420813 ANKRD13AQ8IZ07 590 aa21.73■■□□□ 1.07
MSH6-203ENST00000420813 SUGT1Q9Y2Z0 365 aa21.73■■□□□ 1.07
MSH6-203ENST00000420813 TNNI2P48788 182 aa21.72■■□□□ 1.07
MSH6-203ENST00000420813 GRIK5Q16478 980 aa21.72■■□□□ 1.07
MSH6-203ENST00000420813 TEPSINQ96N21 525 aa21.72■■□□□ 1.07
MSH6-203ENST00000420813 MRIQ9BWK5 157 aa21.72■■□□□ 1.07
MSH6-203ENST00000420813 FBXO3Q9UK99 471 aa21.72■■□□□ 1.07
MSH6-203ENST00000420813 UBTFL1P0CB47 393 aaPredicted RBP21.71■■□□□ 1.07
MSH6-203ENST00000420813 BCAMP50895 628 aa21.71■■□□□ 1.07
MSH6-203ENST00000420813 IFNL1Q8IU54 200 aa21.71■■□□□ 1.07
MSH6-203ENST00000420813 TEKT1Q969V4 418 aa21.71■■□□□ 1.07
MSH6-203ENST00000420813 API5Q9BZZ5 524 aaKnown RBP21.71■■□□□ 1.07
MSH6-203ENST00000420813 MAST3O60307 1309 aa21.71■■□□□ 1.07
MSH6-203ENST00000420813 SLC5A1P13866 664 aa21.7■■□□□ 1.06
MSH6-203ENST00000420813 LPIN2Q92539 896 aa21.7■■□□□ 1.06
MSH6-203ENST00000420813 NOB1Q9ULX3 412 aaKnown RBP21.7■■□□□ 1.06
MSH6-203ENST00000420813 HDAC5Q9UQL6 1122 aa21.7■■□□□ 1.06
MSH6-203ENST00000420813 TCP10L2B9ZVM9 353 aa21.69■■□□□ 1.06
MSH6-203ENST00000420813 FKTNO75072 461 aa21.69■■□□□ 1.06
MSH6-203ENST00000420813 ATG9AQ7Z3C6 839 aa21.69■■□□□ 1.06
MSH6-203ENST00000420813 ZDHHC15Q96MV8 337 aa21.69■■□□□ 1.06
MSH6-203ENST00000420813 PDE4DIPQ5VU43 2346 aa21.68■■□□□ 1.06
MSH6-203ENST00000420813 CIAO1O76071 339 aa21.68■■□□□ 1.06
MSH6-203ENST00000420813 R3HDMLQ9H3Y0 253 aa21.68■■□□□ 1.06
MSH6-203ENST00000420813 HPS5Q9UPZ3 1129 aa21.68■■□□□ 1.06
MSH6-203ENST00000420813 IGF2BP3O00425 579 aaKnown RBP eCLIP21.67■■□□□ 1.06
MSH6-203ENST00000420813 GJA5P36382 358 aa21.67■■□□□ 1.06
MSH6-203ENST00000420813 FKBP1CQ5VVH2 108 aa21.67■■□□□ 1.06
MSH6-203ENST00000420813 OTUD7BQ6GQQ9 843 aa21.67■■□□□ 1.06
MSH6-203ENST00000420813 CDAN1Q8IWY9 1227 aa21.67■■□□□ 1.06
MSH6-203ENST00000420813 WDR66Q8TBY9 1149 aa21.67■■□□□ 1.06
MSH6-203ENST00000420813 TMEM39BQ9GZU3 492 aa21.67■■□□□ 1.06
MSH6-203ENST00000420813 TMOD2Q9NZR1 351 aa21.67■■□□□ 1.06
MSH6-203ENST00000420813 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.67■■□□□ 1.06
MSH6-203ENST00000420813 TNRC18O15417 2968 aaPredicted RBP21.66■■□□□ 1.06
MSH6-203ENST00000420813 TESPA1A2RU30 521 aaPredicted RBP21.66■■□□□ 1.06
MSH6-203ENST00000420813 FBXO46Q6PJ61 603 aaPredicted RBP21.66■■□□□ 1.06
MSH6-203ENST00000420813 HHIPL2Q6UWX4 724 aa21.66■■□□□ 1.06
MSH6-203ENST00000420813 FAM83AQ86UY5 434 aa21.66■■□□□ 1.06
MSH6-203ENST00000420813 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.65■■□□□ 1.06
MSH6-203ENST00000420813 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.65■■□□□ 1.06
MSH6-203ENST00000420813 ARHGAP45Q92619 1136 aa21.65■■□□□ 1.06
MSH6-203ENST00000420813 OPTNQ96CV9 577 aa21.65■■□□□ 1.06
MSH6-203ENST00000420813 ELP3Q9H9T3 547 aa21.65■■□□□ 1.06
MSH6-203ENST00000420813 AK9Q5TCS8 1911 aa21.65■■□□□ 1.06
MSH6-203ENST00000420813 RPAP1Q9BWH6 1393 aaPredicted RBP21.64■■□□□ 1.06
MSH6-203ENST00000420813 RARSP54136 660 aaKnown RBP21.64■■□□□ 1.05
MSH6-203ENST00000420813 SOX10P56693 466 aa21.64■■□□□ 1.05
MSH6-203ENST00000420813 MAP3K9P80192 1104 aa21.64■■□□□ 1.05
MSH6-203ENST00000420813 ATP2B3Q16720 1220 aa21.64■■□□□ 1.05
MSH6-203ENST00000420813 APOBEC3HQ6NTF7 200 aaKnown RBP21.64■■□□□ 1.05
MSH6-203ENST00000420813 HOOK2Q96ED9 719 aa21.64■■□□□ 1.05
MSH6-203ENST00000420813 SIL1Q9H173 461 aa21.64■■□□□ 1.05
MSH6-203ENST00000420813 CEP126Q9P2H0 1117 aa21.64■■□□□ 1.05
MSH6-203ENST00000420813 LRRFIP2Q9Y608 721 aaKnown RBP21.64■■□□□ 1.05
MSH6-203ENST00000420813 ZBTB22O15209 634 aa21.63■■□□□ 1.05
MSH6-203ENST00000420813 IL15P40933 162 aaPredicted RBP21.63■■□□□ 1.05
MSH6-203ENST00000420813 CSADQ9Y600 493 aa21.63■■□□□ 1.05
MSH6-203ENST00000420813 CACNB3P54284 484 aa21.62■■□□□ 1.05
MSH6-203ENST00000420813 VGLL4Q14135 290 aa21.62■■□□□ 1.05
MSH6-203ENST00000420813 INTS3Q68E01 1043 aaKnown RBP21.62■■□□□ 1.05
MSH6-203ENST00000420813 COPRSQ9NQ92 184 aa21.62■■□□□ 1.05
MSH6-203ENST00000420813 GNL3LQ9NVN8 582 aaKnown RBP21.62■■□□□ 1.05
MSH6-203ENST00000420813 MYH2Q9UKX2 1941 aa21.62■■□□□ 1.05
MSH6-203ENST00000420813 SEMA3EO15041 775 aa21.61■■□□□ 1.05
MSH6-203ENST00000420813 MS4A4AQ96JQ5 239 aa21.61■■□□□ 1.05
MSH6-203ENST00000420813 MEIS3Q99687 375 aa21.61■■□□□ 1.05
MSH6-203ENST00000420813 PTPN18Q99952 460 aa21.61■■□□□ 1.05
MSH6-203ENST00000420813 SALL1Q9NSC2 1324 aa21.6■■□□□ 1.05
MSH6-203ENST00000420813 CRHR2Q13324 411 aa21.6■■□□□ 1.05
MSH6-203ENST00000420813 SPDYE5A6NIY4 337 aa21.59■■□□□ 1.05
MSH6-203ENST00000420813 GNAI3P08754 354 aa21.59■■□□□ 1.05
MSH6-203ENST00000420813 GTF2A2P52657 109 aa21.59■■□□□ 1.05
MSH6-203ENST00000420813 ERO1AQ96HE7 468 aa21.59■■□□□ 1.05
MSH6-203ENST00000420813 DENND2AQ9ULE3 1009 aa21.59■■□□□ 1.05
MSH6-203ENST00000420813 PA2G4Q9UQ80 394 aaKnown RBP21.59■■□□□ 1.05
MSH6-203ENST00000420813 DCAF15Q66K64 600 aa21.58■■□□□ 1.05
MSH6-203ENST00000420813 CNKSR2Q8WXI2 1034 aa21.58■■□□□ 1.05
MSH6-203ENST00000420813 DAGLAQ9Y4D2 1042 aa21.58■■□□□ 1.05
MSH6-203ENST00000420813 TRIM17Q9Y577 477 aa21.58■■□□□ 1.05
MSH6-203ENST00000420813 LDHBP07195 334 aaKnown RBP21.57■■□□□ 1.04
MSH6-203ENST00000420813 PRDX5P30044 214 aa21.57■■□□□ 1.04
MSH6-203ENST00000420813 PHKA1P46020 1223 aa21.57■■□□□ 1.04
MSH6-203ENST00000420813 MTX1Q13505 466 aa21.57■■□□□ 1.04
MSH6-203ENST00000420813 OTOP1Q7RTM1 612 aa21.57■■□□□ 1.04
MSH6-203ENST00000420813 FAM151AQ8WW52 585 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms