RNA–Protein interactions for RNA: ENST00000420709.5

PRAME-207, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 2

Gene PRAME, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-207ENST00000420709 CFHR5Q9BXR6 569 aa16.15■□□□□ 0.18
PRAME-207ENST00000420709 ELP3Q9H9T3 547 aa16.15■□□□□ 0.18
PRAME-207ENST00000420709 LAMB1P07942 1786 aa16.14■□□□□ 0.17
PRAME-207ENST00000420709 BCAMP50895 628 aa16.14■□□□□ 0.17
PRAME-207ENST00000420709 TNFAIP1Q13829 316 aa16.14■□□□□ 0.17
PRAME-207ENST00000420709 NOM1Q5C9Z4 860 aaKnown RBP16.14■□□□□ 0.17
PRAME-207ENST00000420709 CDCA7LQ96GN5 454 aa16.14■□□□□ 0.17
PRAME-207ENST00000420709 TMEM39BQ9GZU3 492 aa16.14■□□□□ 0.17
PRAME-207ENST00000420709 USP44Q9H0E7 712 aa16.14■□□□□ 0.17
PRAME-207ENST00000420709 PDE8BO95263 885 aa16.13■□□□□ 0.17
PRAME-207ENST00000420709 ALDH1A1P00352 501 aa16.13■□□□□ 0.17
PRAME-207ENST00000420709 CACNB3P54284 484 aa16.13■□□□□ 0.17
PRAME-207ENST00000420709 SLFN5Q08AF3 891 aa16.13■□□□□ 0.17
PRAME-207ENST00000420709 CAVIN4Q5BKX8 364 aa16.13■□□□□ 0.17
PRAME-207ENST00000420709 FBXO46Q6PJ61 603 aaPredicted RBP16.13■□□□□ 0.17
PRAME-207ENST00000420709 ANKRD13AQ8IZ07 590 aa16.13■□□□□ 0.17
PRAME-207ENST00000420709 TEPSINQ96N21 525 aa16.13■□□□□ 0.17
PRAME-207ENST00000420709 INHBEP58166 350 aa16.12■□□□□ 0.17
PRAME-207ENST00000420709 CNKSR2Q8WXI2 1034 aa16.12■□□□□ 0.17
PRAME-207ENST00000420709 OPTNQ96CV9 577 aa16.12■□□□□ 0.17
PRAME-207ENST00000420709 SMC4Q9NTJ3 1288 aa16.12■□□□□ 0.17
PRAME-207ENST00000420709 HTTP42858 3142 aa16.11■□□□□ 0.17
PRAME-207ENST00000420709 UNCXA6NJT0 531 aa16.11■□□□□ 0.17
PRAME-207ENST00000420709 PTPN18Q99952 460 aa16.11■□□□□ 0.17
PRAME-207ENST00000420709 TRIM17Q9Y577 477 aa16.11■□□□□ 0.17
PRAME-207ENST00000420709 FGFR2P21802 821 aa16.1■□□□□ 0.17
PRAME-207ENST00000420709 RFX5P48382 616 aaPredicted RBP16.1■□□□□ 0.17
PRAME-207ENST00000420709 TNNI2P48788 182 aa16.1■□□□□ 0.17
PRAME-207ENST00000420709 CRHR2Q13324 411 aa16.1■□□□□ 0.17
PRAME-207ENST00000420709 PUM3Q15397 648 aaKnown RBP16.1■□□□□ 0.17
PRAME-207ENST00000420709 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.1■□□□□ 0.17
PRAME-207ENST00000420709 TBC1D22AQ8WUA7 517 aa16.1■□□□□ 0.17
PRAME-207ENST00000420709 TEKT1Q969V4 418 aa16.1■□□□□ 0.17
PRAME-207ENST00000420709 IFIT1P09914 478 aaKnown RBP16.09■□□□□ 0.17
PRAME-207ENST00000420709 VGLL4Q14135 290 aa16.09■□□□□ 0.17
PRAME-207ENST00000420709 OTOP1Q7RTM1 612 aa16.09■□□□□ 0.17
PRAME-207ENST00000420709 CD99L2Q8TCZ2 262 aa16.09■□□□□ 0.17
PRAME-207ENST00000420709 MYH13Q9UKX3 1938 aa16.09■□□□□ 0.17
PRAME-207ENST00000420709 EYA2O00167 538 aa16.08■□□□□ 0.16
PRAME-207ENST00000420709 SLC34A2O95436 690 aa16.08■□□□□ 0.16
PRAME-207ENST00000420709 ALDH1L2Q3SY69 923 aa16.08■□□□□ 0.16
PRAME-207ENST00000420709 OTUD7BQ6GQQ9 843 aa16.08■□□□□ 0.16
PRAME-207ENST00000420709 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.08■□□□□ 0.16
PRAME-207ENST00000420709 SIL1Q9H173 461 aa16.08■□□□□ 0.16
PRAME-207ENST00000420709 PDE4DIPQ5VU43 2346 aa16.07■□□□□ 0.16
PRAME-207ENST00000420709 TESPA1A2RU30 521 aaPredicted RBP16.07■□□□□ 0.16
PRAME-207ENST00000420709 SLC5A1P13866 664 aa16.07■□□□□ 0.16
PRAME-207ENST00000420709 MAP3K9P80192 1104 aa16.07■□□□□ 0.16
PRAME-207ENST00000420709 HDLBPQ00341 1268 aaKnown RBP16.07■□□□□ 0.16
PRAME-207ENST00000420709 CAP1Q01518 475 aa16.07■□□□□ 0.16
PRAME-207ENST00000420709 APOBEC3HQ6NTF7 200 aaKnown RBP16.07■□□□□ 0.16
PRAME-207ENST00000420709 ATG9AQ7Z3C6 839 aa16.07■□□□□ 0.16
PRAME-207ENST00000420709 BRI3BPQ8WY22 251 aa16.07■□□□□ 0.16
PRAME-207ENST00000420709 OTUD5Q96G74 571 aa16.07■□□□□ 0.16
PRAME-207ENST00000420709 MS4A4AQ96JQ5 239 aa16.07■□□□□ 0.16
PRAME-207ENST00000420709 ZDHHC15Q96MV8 337 aa16.07■□□□□ 0.16
PRAME-207ENST00000420709 CSADQ9Y600 493 aa16.07■□□□□ 0.16
PRAME-207ENST00000420709 CENPFP49454 3210 aa16.06■□□□□ 0.16
PRAME-207ENST00000420709 KIF16BQ96L93 1317 aa16.06■□□□□ 0.16
PRAME-207ENST00000420709 CCL15-CCL14A0A0B4J2E2 113 aa16.06■□□□□ 0.16
PRAME-207ENST00000420709 UBTFL1P0CB47 393 aaPredicted RBP16.06■□□□□ 0.16
PRAME-207ENST00000420709 CCL15Q16663 113 aa16.06■□□□□ 0.16
PRAME-207ENST00000420709 ERO1AQ96HE7 468 aa16.06■□□□□ 0.16
PRAME-207ENST00000420709 TMOD2Q9NZR1 351 aa16.06■□□□□ 0.16
PRAME-207ENST00000420709 NOB1Q9ULX3 412 aaKnown RBP16.06■□□□□ 0.16
PRAME-207ENST00000420709 MAST3O60307 1309 aa16.05■□□□□ 0.16
PRAME-207ENST00000420709 LPIN2Q92539 896 aa16.05■□□□□ 0.16
PRAME-207ENST00000420709 WRNIP1Q96S55 665 aa16.05■□□□□ 0.16
PRAME-207ENST00000420709 SP3Q02447 781 aa16.04■□□□□ 0.16
PRAME-207ENST00000420709 TAF1CQ15572 869 aaPredicted RBP16.04■□□□□ 0.16
PRAME-207ENST00000420709 ATP2B3Q16720 1220 aa16.04■□□□□ 0.16
PRAME-207ENST00000420709 TRMT2AQ8IZ69 625 aaKnown RBP16.04■□□□□ 0.16
PRAME-207ENST00000420709 ZKSCAN4Q969J2 545 aaPredicted RBP16.04■□□□□ 0.16
PRAME-207ENST00000420709 PA2G4Q9UQ80 394 aaKnown RBP16.04■□□□□ 0.16
PRAME-207ENST00000420709 SUGT1Q9Y2Z0 365 aa16.04■□□□□ 0.16
PRAME-207ENST00000420709 LRRFIP2Q9Y608 721 aaKnown RBP16.04■□□□□ 0.16
PRAME-207ENST00000420709 SNCAIPQ9Y6H5 919 aa16.04■□□□□ 0.16
PRAME-207ENST00000420709 PRDX5P30044 214 aa16.03■□□□□ 0.16
PRAME-207ENST00000420709 GTF2A2P52657 109 aa16.03■□□□□ 0.16
PRAME-207ENST00000420709 DIXDC1Q155Q3 683 aa16.03■□□□□ 0.16
PRAME-207ENST00000420709 HHIPL2Q6UWX4 724 aa16.03■□□□□ 0.16
PRAME-207ENST00000420709 MIGA2Q7L4E1 593 aa16.03■□□□□ 0.16
PRAME-207ENST00000420709 FAM83AQ86UY5 434 aa16.03■□□□□ 0.16
PRAME-207ENST00000420709 FAM43AQ8N2R8 423 aa16.03■□□□□ 0.16
PRAME-207ENST00000420709 WDR66Q8TBY9 1149 aa16.03■□□□□ 0.16
PRAME-207ENST00000420709 MRIQ9BWK5 157 aa16.03■□□□□ 0.16
PRAME-207ENST00000420709 EFCC1Q9HA90 598 aa16.03■□□□□ 0.16
PRAME-207ENST00000420709 PTPN22Q9Y2R2 807 aa16.03■□□□□ 0.16
PRAME-207ENST00000420709 POTEFA5A3E0 1075 aa16.02■□□□□ 0.16
PRAME-207ENST00000420709 SPDYE5A6NIY4 337 aa16.02■□□□□ 0.16
PRAME-207ENST00000420709 TCP10Q12799 353 aa16.02■□□□□ 0.16
PRAME-207ENST00000420709 MEIS3Q99687 375 aa16.02■□□□□ 0.16
PRAME-207ENST00000420709 CEP126Q9P2H0 1117 aa16.02■□□□□ 0.16
PRAME-207ENST00000420709 DAGLAQ9Y4D2 1042 aa16.02■□□□□ 0.16
PRAME-207ENST00000420709 ZSWIM8A7E2V4 1837 aa16.01■□□□□ 0.15
PRAME-207ENST00000420709 CIAO1O76071 339 aa16.01■□□□□ 0.15
PRAME-207ENST00000420709 ADORA1P30542 326 aa16.01■□□□□ 0.15
PRAME-207ENST00000420709 INPP5BP32019 993 aa16.01■□□□□ 0.15
PRAME-207ENST00000420709 PHKA1P46020 1223 aa16.01■□□□□ 0.15
PRAME-207ENST00000420709 PRPF38BQ5VTL8 546 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms