RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 CCDC87Q9NVE4 849 aa16.9■□□□□ 0.3
AP000550.1-201ENST00000420508 PTPRUQ92729 1446 aa16.9■□□□□ 0.3
AP000550.1-201ENST00000420508 GPAA1O43292 621 aa16.9■□□□□ 0.3
AP000550.1-201ENST00000420508 STAT6P42226 847 aa16.9■□□□□ 0.3
AP000550.1-201ENST00000420508 BTG4Q9NY30 223 aa16.9■□□□□ 0.3
AP000550.1-201ENST00000420508 IMPACTQ9P2X3 320 aa16.9■□□□□ 0.3
AP000550.1-201ENST00000420508 IQSEC2Q5JU85 1478 aa16.89■□□□□ 0.29
AP000550.1-201ENST00000420508 BICDL2A1A5D9 508 aa16.89■□□□□ 0.29
AP000550.1-201ENST00000420508 LEO1Q8WVC0 666 aaPredicted RBP16.89■□□□□ 0.29
AP000550.1-201ENST00000420508 CYLC1P35663 651 aaPredicted RBP16.89■□□□□ 0.29
AP000550.1-201ENST00000420508 CETN1Q12798 172 aa16.89■□□□□ 0.29
AP000550.1-201ENST00000420508 ANO1Q5XXA6 986 aa16.89■□□□□ 0.29
AP000550.1-201ENST00000420508 N4BP3O15049 544 aa16.89■□□□□ 0.29
AP000550.1-201ENST00000420508 CKAP4Q07065 602 aaKnown RBP16.89■□□□□ 0.29
AP000550.1-201ENST00000420508 IQUBQ8NA54 791 aa16.89■□□□□ 0.29
AP000550.1-201ENST00000420508 RBSNQ9H1K0 784 aa16.89■□□□□ 0.29
AP000550.1-201ENST00000420508 MBD4O95243 580 aa16.89■□□□□ 0.29
AP000550.1-201ENST00000420508 TIMM10P62072 90 aa16.89■□□□□ 0.29
AP000550.1-201ENST00000420508 MYL5Q02045 173 aa16.89■□□□□ 0.29
AP000550.1-201ENST00000420508 BMS1Q14692 1282 aaKnown RBP16.89■□□□□ 0.29
AP000550.1-201ENST00000420508 IFI16Q16666 785 aaKnown RBP16.89■□□□□ 0.29
AP000550.1-201ENST00000420508 CRACR2AQ9BSW2 395 aa16.89■□□□□ 0.29
AP000550.1-201ENST00000420508 NAA15Q9BXJ9 866 aaKnown RBP16.89■□□□□ 0.29
AP000550.1-201ENST00000420508 LSG1Q9H089 658 aaKnown RBP16.89■□□□□ 0.29
AP000550.1-201ENST00000420508 RFX7Q2KHR2 1363 aa16.89■□□□□ 0.29
AP000550.1-201ENST00000420508 CARD10Q9BWT7 1032 aa16.88■□□□□ 0.29
AP000550.1-201ENST00000420508 MAP4K1Q92918 833 aa16.88■□□□□ 0.29
AP000550.1-201ENST00000420508 GLT8D2Q9H1C3 349 aa16.88■□□□□ 0.29
AP000550.1-201ENST00000420508 SLAIN2Q9P270 581 aa16.88■□□□□ 0.29
AP000550.1-201ENST00000420508 PFKFB2O60825 505 aa16.88■□□□□ 0.29
AP000550.1-201ENST00000420508 PCP11498 1178 aaKnown RBP16.88■□□□□ 0.29
AP000550.1-201ENST00000420508 CCDC172P0C7W6 258 aa16.87■□□□□ 0.29
AP000550.1-201ENST00000420508 CETN2P41208 172 aa16.87■□□□□ 0.29
AP000550.1-201ENST00000420508 NT5C2P49902 561 aa16.87■□□□□ 0.29
AP000550.1-201ENST00000420508 MTX1Q13505 466 aa16.87■□□□□ 0.29
AP000550.1-201ENST00000420508 ZBTB38Q8NAP3 1195 aaPredicted RBP16.87■□□□□ 0.29
AP000550.1-201ENST00000420508 PPP1R9BQ96SB3 815 aa16.87■□□□□ 0.29
AP000550.1-201ENST00000420508 EAF2Q96CJ1 260 aaPredicted RBP16.87■□□□□ 0.29
AP000550.1-201ENST00000420508 FAM89AQ96GI7 184 aa16.87■□□□□ 0.29
AP000550.1-201ENST00000420508 LZTS2Q9BRK4 669 aa16.87■□□□□ 0.29
AP000550.1-201ENST00000420508 ANTXR1Q9H6X2 564 aa16.87■□□□□ 0.29
AP000550.1-201ENST00000420508 TUBB2AQ13885 445 aa16.87■□□□□ 0.29
AP000550.1-201ENST00000420508 RRAGBQ5VZM2 374 aa16.87■□□□□ 0.29
AP000550.1-201ENST00000420508 TRIM47Q96LD4 638 aa16.87■□□□□ 0.29
AP000550.1-201ENST00000420508 TUBB2BQ9BVA1 445 aa16.87■□□□□ 0.29
AP000550.1-201ENST00000420508 ERBB3P21860 1342 aa16.87■□□□□ 0.29
AP000550.1-201ENST00000420508 TRIM14Q14142 442 aa16.87■□□□□ 0.29
AP000550.1-201ENST00000420508 RRP36Q96EU6 259 aaKnown RBP16.87■□□□□ 0.29
AP000550.1-201ENST00000420508 PIK3C2BO00750 1634 aa16.87■□□□□ 0.29
AP000550.1-201ENST00000420508 LDHBP07195 334 aaKnown RBP16.86■□□□□ 0.29
AP000550.1-201ENST00000420508 PRKCSHP14314 528 aaPredicted RBP16.86■□□□□ 0.29
AP000550.1-201ENST00000420508 EYA3Q99504 573 aa16.86■□□□□ 0.29
AP000550.1-201ENST00000420508 STX8Q9UNK0 236 aa16.86■□□□□ 0.29
AP000550.1-201ENST00000420508 DESP17661 470 aa16.85■□□□□ 0.29
AP000550.1-201ENST00000420508 FMNL3Q8IVF7 1028 aa16.85■□□□□ 0.29
AP000550.1-201ENST00000420508 WDR66Q8TBY9 1149 aa16.85■□□□□ 0.29
AP000550.1-201ENST00000420508 STK24Q9Y6E0 443 aa16.85■□□□□ 0.29
AP000550.1-201ENST00000420508 PXDNLA1KZ92 1463 aa16.85■□□□□ 0.29
AP000550.1-201ENST00000420508 E7EWF7 191 aa16.85■□□□□ 0.29
AP000550.1-201ENST00000420508 DNAI2Q9GZS0 605 aa16.85■□□□□ 0.29
AP000550.1-201ENST00000420508 TMEM94Q12767 1356 aa16.85■□□□□ 0.29
AP000550.1-201ENST00000420508 A1BGP04217 495 aa16.85■□□□□ 0.29
AP000550.1-201ENST00000420508 CCDC175P0C221 793 aa16.85■□□□□ 0.29
AP000550.1-201ENST00000420508 CTSWP56202 376 aa16.85■□□□□ 0.29
AP000550.1-201ENST00000420508 CCDC40Q4G0X9 1142 aa16.85■□□□□ 0.29
AP000550.1-201ENST00000420508 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.85■□□□□ 0.29
AP000550.1-201ENST00000420508 TRMT1Q9NXH9 659 aaKnown RBP16.85■□□□□ 0.29
AP000550.1-201ENST00000420508 MAST3O60307 1309 aa16.85■□□□□ 0.29
AP000550.1-201ENST00000420508 CLTCQ00610 1675 aaKnown RBP16.85■□□□□ 0.29
AP000550.1-201ENST00000420508 PDE4CQ08493 712 aa16.85■□□□□ 0.29
AP000550.1-201ENST00000420508 ZFYVE27Q5T4F4 411 aa16.85■□□□□ 0.29
AP000550.1-201ENST00000420508 TTC6Q86TZ1 520 aa16.85■□□□□ 0.29
AP000550.1-201ENST00000420508 MARCKSP29966 332 aaPredicted RBP16.84■□□□□ 0.29
AP000550.1-201ENST00000420508 KRT83P78385 493 aa16.84■□□□□ 0.29
AP000550.1-201ENST00000420508 SIRT2Q8IXJ6 389 aa16.84■□□□□ 0.29
AP000550.1-201ENST00000420508 CEP112Q8N8E3 955 aa16.84■□□□□ 0.29
AP000550.1-201ENST00000420508 MLKLQ8NB16 471 aa16.84■□□□□ 0.29
AP000550.1-201ENST00000420508 ADGRB1O14514 1584 aa16.84■□□□□ 0.29
AP000550.1-201ENST00000420508 SLU7O95391 586 aaKnown RBP16.84■□□□□ 0.29
AP000550.1-201ENST00000420508 PLCD1P51178 756 aa16.84■□□□□ 0.29
AP000550.1-201ENST00000420508 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.84■□□□□ 0.29
AP000550.1-201ENST00000420508 NAPAP54920 295 aa16.84■□□□□ 0.29
AP000550.1-201ENST00000420508 RAB11FIP4Q86YS3 637 aa16.84■□□□□ 0.29
AP000550.1-201ENST00000420508 SPATA5Q8NB90 893 aa16.84■□□□□ 0.29
AP000550.1-201ENST00000420508 ATP10DQ9P241 1426 aa16.84■□□□□ 0.29
AP000550.1-201ENST00000420508 WDR17Q8IZU2 1322 aa16.84■□□□□ 0.29
AP000550.1-201ENST00000420508 CNGA4Q8IV77 575 aa16.84■□□□□ 0.29
AP000550.1-201ENST00000420508 DNAJC10Q8IXB1 793 aa16.84■□□□□ 0.29
AP000550.1-201ENST00000420508 RBM17Q96I25 401 aaKnown RBP16.84■□□□□ 0.29
AP000550.1-201ENST00000420508 PATL2C9JE40 543 aaKnown RBP16.83■□□□□ 0.29
AP000550.1-201ENST00000420508 CPA1P15085 419 aa16.83■□□□□ 0.29
AP000550.1-201ENST00000420508 GNG11P61952 73 aa16.83■□□□□ 0.29
AP000550.1-201ENST00000420508 UBE3CQ15386 1083 aa16.83■□□□□ 0.29
AP000550.1-201ENST00000420508 ME3Q16798 604 aa16.83■□□□□ 0.29
AP000550.1-201ENST00000420508 FERMT2Q96AC1 680 aa16.83■□□□□ 0.29
AP000550.1-201ENST00000420508 TECPR2O15040 1411 aa16.83■□□□□ 0.29
AP000550.1-201ENST00000420508 TMEM132AQ24JP5 1023 aa16.83■□□□□ 0.28
AP000550.1-201ENST00000420508 CCDC129Q6ZRS4 1044 aa16.83■□□□□ 0.28
AP000550.1-201ENST00000420508 MAP3K15Q6ZN16 1313 aa16.83■□□□□ 0.28
AP000550.1-201ENST00000420508 KCNQ3O43525 872 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms