RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 DDX54Q8TDD1 881 aaKnown RBP7.09□□□□□ -1.27
CHD2-202ENST00000420239 EPS8L1Q8TE68 723 aa7.09□□□□□ -1.27
CHD2-202ENST00000420239 JAKMIP1Q96N16 626 aaKnown RBP7.09□□□□□ -1.27
CHD2-202ENST00000420239 CARD6Q9BX69 1037 aa7.09□□□□□ -1.27
CHD2-202ENST00000420239 PPP1R12CQ9BZL4 782 aa7.09□□□□□ -1.27
CHD2-202ENST00000420239 TPCN1Q9ULQ1 816 aa7.09□□□□□ -1.27
CHD2-202ENST00000420239 CYP46A1Q9Y6A2 500 aa7.09□□□□□ -1.27
CHD2-202ENST00000420239 CTAGE5O15320 804 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 SLC10A3P09131 477 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 MAGEA9P43362 315 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 EVCP57679 992 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 GSDMDP57764 484 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 PTH1RQ03431 593 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 DHX8Q14562 1220 aaKnown RBP7.08□□□□□ -1.28
CHD2-202ENST00000420239 WASHC4Q2M389 1173 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 TRIM65Q6PJ69 517 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 SLC4A10Q6U841 1118 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 AOPEPQ8N6M6 819 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 RUFY2Q8WXA3 655 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 UCN2Q96RP3 112 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 FUT8Q9BYC5 575 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 DNAI1Q9UI46 699 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 ADAM21Q9UKJ8 722 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 SPG7Q9UQ90 795 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 FMN2Q9NZ56 1722 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 GOLGA6L4A6NEF3 574 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 POTEJP0CG39 1038 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 ETF1P62495 437 aaKnown RBP7.08□□□□□ -1.28
CHD2-202ENST00000420239 SULT6B1Q6IMI4 303 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 LARP1Q6PKG0 1096 aaKnown RBP7.08□□□□□ -1.28
CHD2-202ENST00000420239 EP400NLQ6ZTU2 488 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 MCM10Q7L590 875 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 MNS1Q8NEH6 495 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 RHPN1Q8TCX5 695 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 USP44Q9H0E7 712 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 GOLPH3LQ9H4A5 285 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 IL1RAPL2Q9NP60 686 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 IMPACTQ9P2X3 320 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 USTQ9Y2C2 406 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 PARP3Q9Y6F1 533 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 OVOS2A0A0J9YW53 1432 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 OVOS2Q6IE36 1432 aa7.08□□□□□ -1.28
CHD2-202ENST00000420239 USP31Q70CQ4 1352 aa7.07□□□□□ -1.28
CHD2-202ENST00000420239 EFCAB8A8MWE9 144 aa7.07□□□□□ -1.28
CHD2-202ENST00000420239 EIF3CLB5ME19 914 aaKnown RBP7.07□□□□□ -1.28
CHD2-202ENST00000420239 CFAP99D6REC4 459 aa7.07□□□□□ -1.28
CHD2-202ENST00000420239 WASLO00401 505 aaPredicted RBP7.07□□□□□ -1.28
CHD2-202ENST00000420239 RESTQ13127 1097 aa7.07□□□□□ -1.28
CHD2-202ENST00000420239 GOLGA6L1Q8N7Z2 621 aa7.07□□□□□ -1.28
CHD2-202ENST00000420239 CCDC150Q8NCX0 1101 aa7.07□□□□□ -1.28
CHD2-202ENST00000420239 EIF3CQ99613 913 aaKnown RBP7.07□□□□□ -1.28
CHD2-202ENST00000420239 ZSCAN16Q9H4T2 348 aaPredicted RBP7.07□□□□□ -1.28
CHD2-202ENST00000420239 BABAM1Q9NWV8 329 aa7.07□□□□□ -1.28
CHD2-202ENST00000420239 KDRP35968 1356 aa7.07□□□□□ -1.28
CHD2-202ENST00000420239 JCADQ9P266 1359 aa7.07□□□□□ -1.28
CHD2-202ENST00000420239 PALM3A6NDB9 673 aaPredicted RBP7.07□□□□□ -1.28
CHD2-202ENST00000420239 RPS6KA5O75582 802 aa7.07□□□□□ -1.28
CHD2-202ENST00000420239 GLRX3O76003 335 aaKnown RBP7.07□□□□□ -1.28
CHD2-202ENST00000420239 MTMR2Q13614 643 aa7.07□□□□□ -1.28
CHD2-202ENST00000420239 RRS1Q15050 365 aaKnown RBP7.07□□□□□ -1.28
CHD2-202ENST00000420239 ANKRD1Q15327 319 aa7.07□□□□□ -1.28
CHD2-202ENST00000420239 CCDC30Q5VVM6 783 aa7.07□□□□□ -1.28
CHD2-202ENST00000420239 NBPF6Q5VWK0 638 aa7.07□□□□□ -1.28
CHD2-202ENST00000420239 PRPF40BQ6NWY9 871 aaKnown RBP7.07□□□□□ -1.28
CHD2-202ENST00000420239 TMC6Q7Z403 805 aa7.07□□□□□ -1.28
CHD2-202ENST00000420239 GPATCH11Q8N954 259 aa7.07□□□□□ -1.28
CHD2-202ENST00000420239 NBPF4Q96M43 638 aa7.07□□□□□ -1.28
CHD2-202ENST00000420239 NEO1Q92859 1461 aa7.06□□□□□ -1.28
CHD2-202ENST00000420239 TOPAZ1Q8N9V7 1692 aa7.06□□□□□ -1.28
CHD2-202ENST00000420239 BECN2A8MW95 431 aa7.06□□□□□ -1.28
CHD2-202ENST00000420239 URI1O94763 535 aaPredicted RBP7.06□□□□□ -1.28
CHD2-202ENST00000420239 BRD2P25440 801 aaKnown RBP7.06□□□□□ -1.28
CHD2-202ENST00000420239 PSMA5P28066 241 aa7.06□□□□□ -1.28
CHD2-202ENST00000420239 CORO7P57737 925 aa7.06□□□□□ -1.28
CHD2-202ENST00000420239 LRRFIP1Q32MZ4 808 aaKnown RBP7.06□□□□□ -1.28
CHD2-202ENST00000420239 HSP90AB4PQ58FF6 505 aa7.06□□□□□ -1.28
CHD2-202ENST00000420239 CWC27Q6UX04 472 aaKnown RBP7.06□□□□□ -1.28
CHD2-202ENST00000420239 RSRC2Q7L4I2 434 aaKnown RBP7.06□□□□□ -1.28
CHD2-202ENST00000420239 HELBQ8NG08 1087 aaPredicted RBP7.06□□□□□ -1.28
CHD2-202ENST00000420239 MAP4K1Q92918 833 aa7.06□□□□□ -1.28
CHD2-202ENST00000420239 STK31Q9BXU1 1019 aa7.06□□□□□ -1.28
CHD2-202ENST00000420239 ALG2Q9H553 416 aa7.06□□□□□ -1.28
CHD2-202ENST00000420239 TSPYL4Q9UJ04 414 aa7.06□□□□□ -1.28
CHD2-202ENST00000420239 NRXN3Q9Y4C0 1643 aa7.06□□□□□ -1.28
CHD2-202ENST00000420239 TECPR2O15040 1411 aa7.05□□□□□ -1.28
CHD2-202ENST00000420239 ANKRD65E5RJM6 399 aa7.05□□□□□ -1.28
CHD2-202ENST00000420239 MAP2K7O14733 419 aa7.05□□□□□ -1.28
CHD2-202ENST00000420239 CLGNO14967 610 aa7.05□□□□□ -1.28
CHD2-202ENST00000420239 CPP00450 1065 aa7.05□□□□□ -1.28
CHD2-202ENST00000420239 IVLP07476 585 aa7.05□□□□□ -1.28
CHD2-202ENST00000420239 TPM1P09493 284 aa7.05□□□□□ -1.28
CHD2-202ENST00000420239 CSB-PGBD3P0DP91 1061 aa7.05□□□□□ -1.28
CHD2-202ENST00000420239 NOM1Q5C9Z4 860 aaKnown RBP7.05□□□□□ -1.28
CHD2-202ENST00000420239 HOMER1Q86YM7 354 aa7.05□□□□□ -1.28
CHD2-202ENST00000420239 SUGP1Q8IWZ8 645 aaKnown RBP7.05□□□□□ -1.28
CHD2-202ENST00000420239 SRRTQ9BXP5 876 aaKnown RBP7.05□□□□□ -1.28
CHD2-202ENST00000420239 PARD6BQ9BYG5 372 aa7.05□□□□□ -1.28
CHD2-202ENST00000420239 XPO4Q9C0E2 1151 aaKnown RBP7.05□□□□□ -1.28
CHD2-202ENST00000420239 KCNG1Q9UIX4 513 aa7.05□□□□□ -1.28
CHD2-202ENST00000420239 TSPOAP1O95153 1857 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms