RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 CFAP100Q494V2 611 aa25.24■■□□□ 1.63
HMGXB4-203ENST00000420166 SMC5Q8IY18 1101 aa25.24■■□□□ 1.63
HMGXB4-203ENST00000420166 NBPF9Q3BBW0 867 aa25.23■■□□□ 1.63
HMGXB4-203ENST00000420166 GGA3Q9NZ52 723 aa25.23■■□□□ 1.63
HMGXB4-203ENST00000420166 ABCF2Q9UG63 623 aa25.23■■□□□ 1.63
HMGXB4-203ENST00000420166 MYO5AQ9Y4I1 1855 aaKnown RBP25.23■■□□□ 1.63
HMGXB4-203ENST00000420166 MYH2Q9UKX2 1941 aa25.22■■□□□ 1.63
HMGXB4-203ENST00000420166 CRKP46108 304 aa25.22■■□□□ 1.63
HMGXB4-203ENST00000420166 RBM5P52756 815 aaKnown RBP eCLIP25.22■■□□□ 1.63
HMGXB4-203ENST00000420166 SPTY2D1Q68D10 685 aaPredicted RBP25.22■■□□□ 1.63
HMGXB4-203ENST00000420166 CNTROBQ8N137 903 aa25.22■■□□□ 1.63
HMGXB4-203ENST00000420166 PCDHAC2Q9Y5I4 1007 aa25.22■■□□□ 1.63
HMGXB4-203ENST00000420166 SPDYE2BA6NHP3 402 aa25.21■■□□□ 1.63
HMGXB4-203ENST00000420166 SPDYE6P0CI01 402 aa25.21■■□□□ 1.63
HMGXB4-203ENST00000420166 ZAP70P43403 619 aa25.21■■□□□ 1.63
HMGXB4-203ENST00000420166 ANKRD45Q5TZF3 282 aa25.21■■□□□ 1.63
HMGXB4-203ENST00000420166 TBC1D9Q6ZT07 1266 aa25.21■■□□□ 1.63
HMGXB4-203ENST00000420166 TEKT1Q969V4 418 aa25.21■■□□□ 1.63
HMGXB4-203ENST00000420166 MRIQ9BWK5 157 aa25.21■■□□□ 1.63
HMGXB4-203ENST00000420166 ZBTB47Q9UFB7 747 aaPredicted RBP25.21■■□□□ 1.63
HMGXB4-203ENST00000420166 ITGBL1O95965 494 aaPredicted RBP25.2■■□□□ 1.62
HMGXB4-203ENST00000420166 ANGEL2Q5VTE6 544 aaKnown RBP25.2■■□□□ 1.62
HMGXB4-203ENST00000420166 ERICH6Q7L0X2 663 aa25.2■■□□□ 1.62
HMGXB4-203ENST00000420166 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.2■■□□□ 1.62
HMGXB4-203ENST00000420166 DCPSQ96C86 337 aaKnown RBP25.2■■□□□ 1.62
HMGXB4-203ENST00000420166 PITPNM2Q9BZ72 1349 aa25.19■■□□□ 1.62
HMGXB4-203ENST00000420166 MAST2Q6P0Q8 1798 aa25.19■■□□□ 1.62
HMGXB4-203ENST00000420166 CYP2E1P05181 493 aaPredicted RBP25.19■■□□□ 1.62
HMGXB4-203ENST00000420166 ATP5JP18859 108 aa25.19■■□□□ 1.62
HMGXB4-203ENST00000420166 HHIPL2Q6UWX4 724 aa25.19■■□□□ 1.62
HMGXB4-203ENST00000420166 DZIP1Q86YF9 867 aaKnown RBP25.19■■□□□ 1.62
HMGXB4-203ENST00000420166 PRMT6Q96LA8 375 aaPredicted RBP25.19■■□□□ 1.62
HMGXB4-203ENST00000420166 DIXDC1Q155Q3 683 aa25.18■■□□□ 1.62
HMGXB4-203ENST00000420166 GPATCH3Q96I76 525 aa25.18■■□□□ 1.62
HMGXB4-203ENST00000420166 ZDHHC15Q96MV8 337 aa25.18■■□□□ 1.62
HMGXB4-203ENST00000420166 GLIS2Q9BZE0 524 aaPredicted RBP25.18■■□□□ 1.62
HMGXB4-203ENST00000420166 NDUFB9Q9Y6M9 179 aa25.18■■□□□ 1.62
HMGXB4-203ENST00000420166 DOCK2Q92608 1830 aa25.18■■□□□ 1.62
HMGXB4-203ENST00000420166 TRPM7Q96QT4 1865 aa25.17■■□□□ 1.62
HMGXB4-203ENST00000420166 AOX1Q06278 1338 aa25.17■■□□□ 1.62
HMGXB4-203ENST00000420166 MYO1BO43795 1136 aa25.17■■□□□ 1.62
HMGXB4-203ENST00000420166 NEFLP07196 543 aa25.17■■□□□ 1.62
HMGXB4-203ENST00000420166 CDC37L1Q7L3B6 337 aa25.17■■□□□ 1.62
HMGXB4-203ENST00000420166 KRT26Q7Z3Y9 468 aa25.17■■□□□ 1.62
HMGXB4-203ENST00000420166 ECHDC1Q9NTX5 307 aa25.17■■□□□ 1.62
HMGXB4-203ENST00000420166 LRP2BPQ9P2M1 347 aa25.17■■□□□ 1.62
HMGXB4-203ENST00000420166 PASKQ96RG2 1323 aa25.16■■□□□ 1.62
HMGXB4-203ENST00000420166 MECOMQ03112 1051 aa25.16■■□□□ 1.62
HMGXB4-203ENST00000420166 PIH1D3Q9NQM4 214 aaKnown RBP25.16■■□□□ 1.62
HMGXB4-203ENST00000420166 RAI14Q9P0K7 980 aa25.16■■□□□ 1.62
HMGXB4-203ENST00000420166 DAGLAQ9Y4D2 1042 aa25.16■■□□□ 1.62
HMGXB4-203ENST00000420166 USP48Q86UV5 1035 aa25.15■■□□□ 1.62
HMGXB4-203ENST00000420166 SULF1Q8IWU6 871 aa25.15■■□□□ 1.62
HMGXB4-203ENST00000420166 OTUD7AQ8TE49 926 aaPredicted RBP25.15■■□□□ 1.62
HMGXB4-203ENST00000420166 BOLA2Q9H3K6 86 aa25.15■■□□□ 1.62
HMGXB4-203ENST00000420166 CLRN2A0PK11 232 aa25.14■■□□□ 1.62
HMGXB4-203ENST00000420166 TRAF5O00463 557 aa25.14■■□□□ 1.62
HMGXB4-203ENST00000420166 B4GALNT3Q6L9W6 998 aa25.14■■□□□ 1.62
HMGXB4-203ENST00000420166 APOBEC3HQ6NTF7 200 aaKnown RBP25.14■■□□□ 1.62
HMGXB4-203ENST00000420166 APOBEC3FQ8IUX4 373 aaKnown RBP25.14■■□□□ 1.62
HMGXB4-203ENST00000420166 SLF2Q8IX21 1173 aa25.14■■□□□ 1.62
HMGXB4-203ENST00000420166 ZNF384Q8TF68 577 aa25.14■■□□□ 1.62
HMGXB4-203ENST00000420166 NSUN4Q96CB9 384 aaKnown RBP25.14■■□□□ 1.62
HMGXB4-203ENST00000420166 DNAJC2Q99543 621 aaKnown RBP25.14■■□□□ 1.62
HMGXB4-203ENST00000420166 ANTXR1Q9H6X2 564 aa25.14■■□□□ 1.62
HMGXB4-203ENST00000420166 TDRD3Q9H7E2 651 aaKnown RBP25.14■■□□□ 1.62
HMGXB4-203ENST00000420166 GAKO14976 1311 aa25.13■■□□□ 1.61
HMGXB4-203ENST00000420166 SALL3Q9BXA9 1300 aa25.13■■□□□ 1.61
HMGXB4-203ENST00000420166 ADM5C9JUS6 153 aa25.13■■□□□ 1.61
HMGXB4-203ENST00000420166 IGSF3O75054 1194 aa25.13■■□□□ 1.61
HMGXB4-203ENST00000420166 NUCB1Q02818 461 aa25.13■■□□□ 1.61
HMGXB4-203ENST00000420166 SPDYE2Q495Y8 402 aa25.13■■□□□ 1.61
HMGXB4-203ENST00000420166 TSHZ3Q63HK5 1081 aa25.13■■□□□ 1.61
HMGXB4-203ENST00000420166 FAM163AQ96GL9 167 aaPredicted RBP25.13■■□□□ 1.61
HMGXB4-203ENST00000420166 HAUS7Q99871 368 aa25.13■■□□□ 1.61
HMGXB4-203ENST00000420166 LNPKQ9C0E8 428 aa25.13■■□□□ 1.61
HMGXB4-203ENST00000420166 ZNF70Q9UC06 446 aaPredicted RBP25.13■■□□□ 1.61
HMGXB4-203ENST00000420166 TTC41PQ6P2S7 1318 aa25.12■■□□□ 1.61
HMGXB4-203ENST00000420166 MX1P20591 662 aa25.12■■□□□ 1.61
HMGXB4-203ENST00000420166 GSTO1P78417 241 aa25.12■■□□□ 1.61
HMGXB4-203ENST00000420166 FMR1Q06787 632 aaKnown RBP eCLIP25.12■■□□□ 1.61
HMGXB4-203ENST00000420166 TTF1Q15361 905 aaPredicted RBP25.12■■□□□ 1.61
HMGXB4-203ENST00000420166 SCAF8Q9UPN6 1271 aaKnown RBP25.12■■□□□ 1.61
HMGXB4-203ENST00000420166 MROH7-TTC4A0A0A0MT08 1334 aa25.12■■□□□ 1.61
HMGXB4-203ENST00000420166 GOLIM4O00461 696 aa25.11■■□□□ 1.61
HMGXB4-203ENST00000420166 HSPA6P17066 643 aa25.11■■□□□ 1.61
HMGXB4-203ENST00000420166 CHD1LQ86WJ1 897 aa25.11■■□□□ 1.61
HMGXB4-203ENST00000420166 VEZTQ9HBM0 779 aa25.11■■□□□ 1.61
HMGXB4-203ENST00000420166 IDH1O75874 414 aaKnown RBP25.1■■□□□ 1.61
HMGXB4-203ENST00000420166 LDHCP07864 332 aa25.1■■□□□ 1.61
HMGXB4-203ENST00000420166 APLP1P51693 650 aa25.1■■□□□ 1.61
HMGXB4-203ENST00000420166 NAA16Q6N069 864 aaPredicted RBP25.1■■□□□ 1.61
HMGXB4-203ENST00000420166 DLK2Q6UY11 383 aa25.1■■□□□ 1.61
HMGXB4-203ENST00000420166 EDC3Q96F86 508 aaKnown RBP25.1■■□□□ 1.61
HMGXB4-203ENST00000420166 PAG1Q9NWQ8 432 aa25.1■■□□□ 1.61
HMGXB4-203ENST00000420166 MYH7P12883 1935 aa25.1■■□□□ 1.61
HMGXB4-203ENST00000420166 ERC2O15083 957 aa25.08■■□□□ 1.61
HMGXB4-203ENST00000420166 MAP3K12Q12852 859 aa25.08■■□□□ 1.61
HMGXB4-203ENST00000420166 CDC42EP5Q6NZY7 148 aa25.08■■□□□ 1.61
HMGXB4-203ENST00000420166 PI4K2BQ8TCG2 481 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms