RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 TBC1D22AQ8WUA7 517 aa21.69■■□□□ 1.06
PTCD1-202ENST00000419981 TDRD3Q9H7E2 651 aaKnown RBP21.69■■□□□ 1.06
PTCD1-202ENST00000419981 CRKP46108 304 aa21.68■■□□□ 1.06
PTCD1-202ENST00000419981 INHBEP58166 350 aa21.68■■□□□ 1.06
PTCD1-202ENST00000419981 SMC4Q9NTJ3 1288 aa21.68■■□□□ 1.06
PTCD1-202ENST00000419981 MYH2Q9UKX2 1941 aa21.68■■□□□ 1.06
PTCD1-202ENST00000419981 USP2O75604 605 aaPredicted RBP21.67■■□□□ 1.06
PTCD1-202ENST00000419981 SOX10P56693 466 aa21.67■■□□□ 1.06
PTCD1-202ENST00000419981 ANKRD13AQ8IZ07 590 aa21.67■■□□□ 1.06
PTCD1-202ENST00000419981 CDCA7LQ96GN5 454 aa21.67■■□□□ 1.06
PTCD1-202ENST00000419981 KIF16BQ96L93 1317 aa21.66■■□□□ 1.06
PTCD1-202ENST00000419981 FKTNO75072 461 aa21.66■■□□□ 1.06
PTCD1-202ENST00000419981 TNNI2P48788 182 aa21.66■■□□□ 1.06
PTCD1-202ENST00000419981 IFNL1Q8IU54 200 aa21.66■■□□□ 1.06
PTCD1-202ENST00000419981 HPS5Q9UPZ3 1129 aa21.66■■□□□ 1.06
PTCD1-202ENST00000419981 TCP10L2B9ZVM9 353 aa21.65■■□□□ 1.06
PTCD1-202ENST00000419981 IFIT1P09914 478 aaKnown RBP21.65■■□□□ 1.06
PTCD1-202ENST00000419981 BCAMP50895 628 aa21.65■■□□□ 1.06
PTCD1-202ENST00000419981 HDLBPQ00341 1268 aaKnown RBP21.65■■□□□ 1.06
PTCD1-202ENST00000419981 PUM3Q15397 648 aaKnown RBP21.65■■□□□ 1.06
PTCD1-202ENST00000419981 GRIK5Q16478 980 aa21.65■■□□□ 1.06
PTCD1-202ENST00000419981 R3HDMLQ9H3Y0 253 aa21.65■■□□□ 1.06
PTCD1-202ENST00000419981 RBBP6Q7Z6E9 1792 aaKnown RBP21.64■■□□□ 1.06
PTCD1-202ENST00000419981 TEKT1Q969V4 418 aa21.64■■□□□ 1.05
PTCD1-202ENST00000419981 PDE4DIPQ5VU43 2346 aa21.64■■□□□ 1.05
PTCD1-202ENST00000419981 MAST3O60307 1309 aa21.63■■□□□ 1.05
PTCD1-202ENST00000419981 EYA2O00167 538 aa21.63■■□□□ 1.05
PTCD1-202ENST00000419981 FGFR2P21802 821 aa21.63■■□□□ 1.05
PTCD1-202ENST00000419981 RFX5P48382 616 aaPredicted RBP21.63■■□□□ 1.05
PTCD1-202ENST00000419981 TEPSINQ96N21 525 aa21.63■■□□□ 1.05
PTCD1-202ENST00000419981 TMEM39BQ9GZU3 492 aa21.63■■□□□ 1.05
PTCD1-202ENST00000419981 DOCK2Q92608 1830 aa21.63■■□□□ 1.05
PTCD1-202ENST00000419981 IGF2BP3O00425 579 aaKnown RBP eCLIP21.62■■□□□ 1.05
PTCD1-202ENST00000419981 CT47B1P0C2W7 299 aaPredicted RBP21.62■■□□□ 1.05
PTCD1-202ENST00000419981 SLC5A1P13866 664 aa21.62■■□□□ 1.05
PTCD1-202ENST00000419981 GJA5P36382 358 aa21.62■■□□□ 1.05
PTCD1-202ENST00000419981 FBXO46Q6PJ61 603 aaPredicted RBP21.62■■□□□ 1.05
PTCD1-202ENST00000419981 CDAN1Q8IWY9 1227 aa21.62■■□□□ 1.05
PTCD1-202ENST00000419981 TRMT2AQ8IZ69 625 aaKnown RBP21.62■■□□□ 1.05
PTCD1-202ENST00000419981 UBTFL1P0CB47 393 aaPredicted RBP21.61■■□□□ 1.05
PTCD1-202ENST00000419981 OTUD7BQ6GQQ9 843 aa21.61■■□□□ 1.05
PTCD1-202ENST00000419981 OPTNQ96CV9 577 aa21.61■■□□□ 1.05
PTCD1-202ENST00000419981 ELP3Q9H9T3 547 aa21.61■■□□□ 1.05
PTCD1-202ENST00000419981 TMOD2Q9NZR1 351 aa21.61■■□□□ 1.05
PTCD1-202ENST00000419981 SUGT1Q9Y2Z0 365 aa21.61■■□□□ 1.05
PTCD1-202ENST00000419981 LPIN2Q92539 896 aa21.6■■□□□ 1.05
PTCD1-202ENST00000419981 ZDHHC15Q96MV8 337 aa21.6■■□□□ 1.05
PTCD1-202ENST00000419981 MRIQ9BWK5 157 aa21.59■■□□□ 1.05
PTCD1-202ENST00000419981 NOB1Q9ULX3 412 aaKnown RBP21.59■■□□□ 1.05
PTCD1-202ENST00000419981 CACNB3P54284 484 aa21.58■■□□□ 1.05
PTCD1-202ENST00000419981 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.58■■□□□ 1.05
PTCD1-202ENST00000419981 ATG9AQ7Z3C6 839 aa21.58■■□□□ 1.05
PTCD1-202ENST00000419981 API5Q9BZZ5 524 aaKnown RBP21.58■■□□□ 1.05
PTCD1-202ENST00000419981 FBXO3Q9UK99 471 aa21.58■■□□□ 1.05
PTCD1-202ENST00000419981 TESPA1A2RU30 521 aaPredicted RBP21.57■■□□□ 1.04
PTCD1-202ENST00000419981 MAP3K9P80192 1104 aa21.57■■□□□ 1.04
PTCD1-202ENST00000419981 CRHR2Q13324 411 aa21.57■■□□□ 1.04
PTCD1-202ENST00000419981 VGLL4Q14135 290 aa21.57■■□□□ 1.04
PTCD1-202ENST00000419981 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.57■■□□□ 1.04
PTCD1-202ENST00000419981 WDR66Q8TBY9 1149 aa21.57■■□□□ 1.04
PTCD1-202ENST00000419981 SIL1Q9H173 461 aa21.57■■□□□ 1.04
PTCD1-202ENST00000419981 HDAC5Q9UQL6 1122 aa21.57■■□□□ 1.04
PTCD1-202ENST00000419981 CSADQ9Y600 493 aa21.57■■□□□ 1.04
PTCD1-202ENST00000419981 CIAO1O76071 339 aa21.56■■□□□ 1.04
PTCD1-202ENST00000419981 APOBEC3HQ6NTF7 200 aaKnown RBP21.56■■□□□ 1.04
PTCD1-202ENST00000419981 HHIPL2Q6UWX4 724 aa21.56■■□□□ 1.04
PTCD1-202ENST00000419981 FAM83AQ86UY5 434 aa21.56■■□□□ 1.04
PTCD1-202ENST00000419981 PTPN18Q99952 460 aa21.56■■□□□ 1.04
PTCD1-202ENST00000419981 TRIM17Q9Y577 477 aa21.56■■□□□ 1.04
PTCD1-202ENST00000419981 ZSWIM8A7E2V4 1837 aa21.56■■□□□ 1.04
PTCD1-202ENST00000419981 RPAP1Q9BWH6 1393 aaPredicted RBP21.56■■□□□ 1.04
PTCD1-202ENST00000419981 ATP2B3Q16720 1220 aa21.55■■□□□ 1.04
PTCD1-202ENST00000419981 FKBP1CQ5VVH2 108 aa21.55■■□□□ 1.04
PTCD1-202ENST00000419981 CNKSR2Q8WXI2 1034 aa21.55■■□□□ 1.04
PTCD1-202ENST00000419981 HOOK2Q96ED9 719 aa21.55■■□□□ 1.04
PTCD1-202ENST00000419981 ERO1AQ96HE7 468 aa21.55■■□□□ 1.04
PTCD1-202ENST00000419981 CEP126Q9P2H0 1117 aa21.55■■□□□ 1.04
PTCD1-202ENST00000419981 LRRFIP2Q9Y608 721 aaKnown RBP21.55■■□□□ 1.04
PTCD1-202ENST00000419981 CCER2I3L3R5 266 aa21.54■■□□□ 1.04
PTCD1-202ENST00000419981 OTOP1Q7RTM1 612 aa21.54■■□□□ 1.04
PTCD1-202ENST00000419981 MS4A4AQ96JQ5 239 aa21.54■■□□□ 1.04
PTCD1-202ENST00000419981 GTF2A2P52657 109 aa21.53■■□□□ 1.04
PTCD1-202ENST00000419981 CD99L2Q8TCZ2 262 aa21.53■■□□□ 1.04
PTCD1-202ENST00000419981 OTUD5Q96G74 571 aa21.53■■□□□ 1.04
PTCD1-202ENST00000419981 GNL3LQ9NVN8 582 aaKnown RBP21.53■■□□□ 1.04
PTCD1-202ENST00000419981 PTPRFP10586 1907 aa21.53■■□□□ 1.04
PTCD1-202ENST00000419981 MGAMO43451 1857 aa21.52■■□□□ 1.04
PTCD1-202ENST00000419981 CCL15-CCL14A0A0B4J2E2 113 aa21.52■■□□□ 1.04
PTCD1-202ENST00000419981 IL15P40933 162 aaPredicted RBP21.52■■□□□ 1.04
PTCD1-202ENST00000419981 CCL15Q16663 113 aa21.52■■□□□ 1.04
PTCD1-202ENST00000419981 DCAF15Q66K64 600 aa21.52■■□□□ 1.04
PTCD1-202ENST00000419981 WRNIP1Q96S55 665 aa21.52■■□□□ 1.04
PTCD1-202ENST00000419981 RARSP54136 660 aaKnown RBP21.51■■□□□ 1.03
PTCD1-202ENST00000419981 SP3Q02447 781 aa21.51■■□□□ 1.03
PTCD1-202ENST00000419981 BRI3BPQ8WY22 251 aa21.51■■□□□ 1.03
PTCD1-202ENST00000419981 MEIS3Q99687 375 aa21.51■■□□□ 1.03
PTCD1-202ENST00000419981 PA2G4Q9UQ80 394 aaKnown RBP21.51■■□□□ 1.03
PTCD1-202ENST00000419981 DAGLAQ9Y4D2 1042 aa21.51■■□□□ 1.03
PTCD1-202ENST00000419981 SNCAIPQ9Y6H5 919 aa21.51■■□□□ 1.03
PTCD1-202ENST00000419981 DOCK1Q14185 1865 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms