RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 GNAT2P19087 354 aa17.11■□□□□ 0.33
SHMT1P1-201ENST00000419974 MCCP23508 829 aa17.11■□□□□ 0.33
SHMT1P1-201ENST00000419974 NECTIN1Q15223 517 aa17.11■□□□□ 0.33
SHMT1P1-201ENST00000419974 STRIP1Q5VSL9 837 aa17.11■□□□□ 0.33
SHMT1P1-201ENST00000419974 GPR101Q96P66 508 aaPredicted RBP17.11■□□□□ 0.33
SHMT1P1-201ENST00000419974 PUS7LQ9H0K6 701 aaKnown RBP17.11■□□□□ 0.33
SHMT1P1-201ENST00000419974 IQSEC3Q9UPP2 1182 aaPredicted RBP17.11■□□□□ 0.33
SHMT1P1-201ENST00000419974 TOMM70O94826 608 aa17.1■□□□□ 0.33
SHMT1P1-201ENST00000419974 GSTO1P78417 241 aa17.1■□□□□ 0.33
SHMT1P1-201ENST00000419974 ALX1Q15699 326 aa17.1■□□□□ 0.33
SHMT1P1-201ENST00000419974 MAGEB6Q8N7X4 407 aa17.1■□□□□ 0.33
SHMT1P1-201ENST00000419974 ZNF384Q8TF68 577 aa17.1■□□□□ 0.33
SHMT1P1-201ENST00000419974 SEC62Q99442 399 aaKnown RBP17.1■□□□□ 0.33
SHMT1P1-201ENST00000419974 KIF2CQ99661 725 aa17.1■□□□□ 0.33
SHMT1P1-201ENST00000419974 ABCF2Q9UG63 623 aa17.1■□□□□ 0.33
SHMT1P1-201ENST00000419974 U3KPZ7 1027 aaPredicted RBP17.1■□□□□ 0.33
SHMT1P1-201ENST00000419974 CACNA1SQ13698 1873 aa17.09■□□□□ 0.33
SHMT1P1-201ENST00000419974 CHGBP05060 677 aa17.09■□□□□ 0.33
SHMT1P1-201ENST00000419974 LDHBP07195 334 aaKnown RBP17.09■□□□□ 0.33
SHMT1P1-201ENST00000419974 HSPD1P10809 573 aaKnown RBP17.09■□□□□ 0.33
SHMT1P1-201ENST00000419974 MMP14P50281 582 aa17.09■□□□□ 0.33
SHMT1P1-201ENST00000419974 PRELPP51888 382 aa17.09■□□□□ 0.33
SHMT1P1-201ENST00000419974 RASSF7Q02833 373 aa17.09■□□□□ 0.33
SHMT1P1-201ENST00000419974 MECOMQ03112 1051 aa17.09■□□□□ 0.33
SHMT1P1-201ENST00000419974 SLF2Q8IX21 1173 aa17.09■□□□□ 0.33
SHMT1P1-201ENST00000419974 STRBPQ96SI9 672 aaKnown RBP17.09■□□□□ 0.33
SHMT1P1-201ENST00000419974 MYH7P12883 1935 aa17.09■□□□□ 0.33
SHMT1P1-201ENST00000419974 FER1L6Q2WGJ9 1857 aa17.08■□□□□ 0.33
SHMT1P1-201ENST00000419974 M0R2C6 588 aa17.08■□□□□ 0.32
SHMT1P1-201ENST00000419974 RIMBP2O15034 1052 aa17.08■□□□□ 0.32
SHMT1P1-201ENST00000419974 GPAA1O43292 621 aa17.08■□□□□ 0.32
SHMT1P1-201ENST00000419974 LDHCP07864 332 aa17.08■□□□□ 0.32
SHMT1P1-201ENST00000419974 PPP4CP60510 307 aa17.08■□□□□ 0.32
SHMT1P1-201ENST00000419974 PTH1RQ03431 593 aa17.08■□□□□ 0.32
SHMT1P1-201ENST00000419974 TTLL5Q6EMB2 1281 aa17.08■□□□□ 0.32
SHMT1P1-201ENST00000419974 NAA16Q6N069 864 aaPredicted RBP17.08■□□□□ 0.32
SHMT1P1-201ENST00000419974 GIMAP6Q6P9H5 292 aa17.08■□□□□ 0.32
SHMT1P1-201ENST00000419974 RIOK1Q9BRS2 568 aaKnown RBP17.08■□□□□ 0.32
SHMT1P1-201ENST00000419974 RAI14Q9P0K7 980 aa17.08■□□□□ 0.32
SHMT1P1-201ENST00000419974 MAST2Q6P0Q8 1798 aa17.07■□□□□ 0.32
SHMT1P1-201ENST00000419974 ECE2O60344 883 aa17.07■□□□□ 0.32
SHMT1P1-201ENST00000419974 PRDX5P30044 214 aa17.07■□□□□ 0.32
SHMT1P1-201ENST00000419974 HDLBPQ00341 1268 aaKnown RBP17.07■□□□□ 0.32
SHMT1P1-201ENST00000419974 CHAF1AQ13111 956 aaPredicted RBP17.07■□□□□ 0.32
SHMT1P1-201ENST00000419974 MFSD14BQ5SR56 506 aa17.07■□□□□ 0.32
SHMT1P1-201ENST00000419974 RNF20Q5VTR2 975 aa17.07■□□□□ 0.32
SHMT1P1-201ENST00000419974 AIDAQ96BJ3 306 aa17.07■□□□□ 0.32
SHMT1P1-201ENST00000419974 TAOK3Q9H2K8 898 aa17.07■□□□□ 0.32
SHMT1P1-201ENST00000419974 NMRK2Q9NPI5 230 aa17.07■□□□□ 0.32
SHMT1P1-201ENST00000419974 CTNNA3Q9UI47 895 aa17.07■□□□□ 0.32
SHMT1P1-201ENST00000419974 GAKO14976 1311 aa17.07■□□□□ 0.32
SHMT1P1-201ENST00000419974 MYH13Q9UKX3 1938 aa17.06■□□□□ 0.32
SHMT1P1-201ENST00000419974 USP17L3A6NCW0 530 aa17.06■□□□□ 0.32
SHMT1P1-201ENST00000419974 USP17L4A6NCW7 530 aa17.06■□□□□ 0.32
SHMT1P1-201ENST00000419974 GLTPD2A6NH11 291 aa17.06■□□□□ 0.32
SHMT1P1-201ENST00000419974 PATL2C9JE40 543 aaKnown RBP17.06■□□□□ 0.32
SHMT1P1-201ENST00000419974 G3V3G9 751 aa17.06■□□□□ 0.32
SHMT1P1-201ENST00000419974 FOXP2O15409 715 aa17.06■□□□□ 0.32
SHMT1P1-201ENST00000419974 PPIP5K2O43314 1243 aa17.06■□□□□ 0.32
SHMT1P1-201ENST00000419974 CYP7A1P22680 504 aa17.06■□□□□ 0.32
SHMT1P1-201ENST00000419974 GTF2IP78347 998 aa17.06■□□□□ 0.32
SHMT1P1-201ENST00000419974 AOC3Q16853 763 aa17.06■□□□□ 0.32
SHMT1P1-201ENST00000419974 DACT2Q5SW24 774 aa17.06■□□□□ 0.32
SHMT1P1-201ENST00000419974 DCAF8Q5TAQ9 597 aa17.06■□□□□ 0.32
SHMT1P1-201ENST00000419974 USP17L1Q7RTZ2 530 aa17.06■□□□□ 0.32
SHMT1P1-201ENST00000419974 TM6SF1Q9BZW5 370 aa17.06■□□□□ 0.32
SHMT1P1-201ENST00000419974 RBM8AQ9Y5S9 174 aaKnown RBP17.06■□□□□ 0.32
SHMT1P1-201ENST00000419974 MYO3BQ8WXR4 1341 aa17.06■□□□□ 0.32
SHMT1P1-201ENST00000419974 ANP32AP39687 249 aaKnown RBP17.05■□□□□ 0.32
SHMT1P1-201ENST00000419974 IARSP41252 1262 aaKnown RBP17.05■□□□□ 0.32
SHMT1P1-201ENST00000419974 RABEP1Q15276 862 aa17.05■□□□□ 0.32
SHMT1P1-201ENST00000419974 DOK7Q18PE1 504 aa17.05■□□□□ 0.32
SHMT1P1-201ENST00000419974 SLFNL1Q499Z3 407 aa17.05■□□□□ 0.32
SHMT1P1-201ENST00000419974 DZIP1Q86YF9 867 aaKnown RBP17.05■□□□□ 0.32
SHMT1P1-201ENST00000419974 GPR75-ASB3A0A0A6YYF3 556 aa17.04■□□□□ 0.32
SHMT1P1-201ENST00000419974 ZKSCAN1P17029 563 aaPredicted RBP17.04■□□□□ 0.32
SHMT1P1-201ENST00000419974 HSPA6P17066 643 aa17.04■□□□□ 0.32
SHMT1P1-201ENST00000419974 KRT32Q14532 448 aa17.04■□□□□ 0.32
SHMT1P1-201ENST00000419974 HHIPL2Q6UWX4 724 aa17.04■□□□□ 0.32
SHMT1P1-201ENST00000419974 CCDC129Q6ZRS4 1044 aa17.04■□□□□ 0.32
SHMT1P1-201ENST00000419974 ADGRA1Q86SQ6 560 aa17.04■□□□□ 0.32
SHMT1P1-201ENST00000419974 RBM46Q8TBY0 533 aaKnown RBP17.04■□□□□ 0.32
SHMT1P1-201ENST00000419974 SNX21Q969T3 373 aa17.04■□□□□ 0.32
SHMT1P1-201ENST00000419974 DDRGK1Q96HY6 314 aa17.04■□□□□ 0.32
SHMT1P1-201ENST00000419974 DBNDD1Q9H9R9 158 aa17.04■□□□□ 0.32
SHMT1P1-201ENST00000419974 ZNF219Q9P2Y4 722 aaPredicted RBP17.04■□□□□ 0.32
SHMT1P1-201ENST00000419974 ZNRF3Q9ULT6 936 aa17.04■□□□□ 0.32
SHMT1P1-201ENST00000419974 CCDC88AQ3V6T2 1871 aa17.04■□□□□ 0.32
SHMT1P1-201ENST00000419974 MROH7-TTC4A0A0A0MT08 1334 aa17.04■□□□□ 0.32
SHMT1P1-201ENST00000419974 MAGEB6P1A0A0J9YX57 407 aa17.03■□□□□ 0.32
SHMT1P1-201ENST00000419974 YDJCA8MPS7 323 aa17.03■□□□□ 0.32
SHMT1P1-201ENST00000419974 VIL1P09327 827 aaKnown RBP17.03■□□□□ 0.32
SHMT1P1-201ENST00000419974 CREB3L3Q68CJ9 461 aa17.03■□□□□ 0.32
SHMT1P1-201ENST00000419974 DPY19L2Q6NUT2 758 aa17.03■□□□□ 0.32
SHMT1P1-201ENST00000419974 LARGE2Q8N3Y3 721 aa17.03■□□□□ 0.32
SHMT1P1-201ENST00000419974 CERS5Q8N5B7 392 aa17.03■□□□□ 0.32
SHMT1P1-201ENST00000419974 RRAGCQ9HB90 399 aa17.03■□□□□ 0.32
SHMT1P1-201ENST00000419974 CEP350Q5VT06 3117 aa17.03■□□□□ 0.32
SHMT1P1-201ENST00000419974 DICER1Q9UPY3 1922 aaKnown RBP17.03■□□□□ 0.32
SHMT1P1-201ENST00000419974 SLC27A2O14975 620 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms