RNA–Protein interactions for RNA: ENST00000419890.3

TVP23C-202, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-202ENST00000419890 KCNH2Q12809 1159 aa8.3□□□□□ -1.08
TVP23C-202ENST00000419890 DHX8Q14562 1220 aaKnown RBP8.3□□□□□ -1.08
TVP23C-202ENST00000419890 FAM182BQ5T319 152 aa8.3□□□□□ -1.08
TVP23C-202ENST00000419890 BARGINQ6ZT62 677 aa8.3□□□□□ -1.08
TVP23C-202ENST00000419890 LTV1Q96GA3 475 aaPredicted RBP8.3□□□□□ -1.08
TVP23C-202ENST00000419890 PURBQ96QR8 312 aaKnown RBP8.3□□□□□ -1.08
TVP23C-202ENST00000419890 LSG1Q9H089 658 aaKnown RBP8.3□□□□□ -1.08
TVP23C-202ENST00000419890 KCND1Q9NSA2 647 aa8.3□□□□□ -1.08
TVP23C-202ENST00000419890 NLRP2Q9NX02 1062 aa8.3□□□□□ -1.08
TVP23C-202ENST00000419890 OGFRQ9NZT2 677 aa8.3□□□□□ -1.08
TVP23C-202ENST00000419890 THRAP3Q9Y2W1 955 aaKnown RBP8.3□□□□□ -1.08
TVP23C-202ENST00000419890 PAXBP1Q9Y5B6 917 aa8.3□□□□□ -1.08
TVP23C-202ENST00000419890 MYH15Q9Y2K3 1946 aa8.3□□□□□ -1.08
TVP23C-202ENST00000419890 COL5A2P05997 1499 aaPredicted RBP8.3□□□□□ -1.08
TVP23C-202ENST00000419890 LMO7Q8WWI1 1683 aa8.3□□□□□ -1.08
TVP23C-202ENST00000419890 RGPD5Q99666 1765 aa8.3□□□□□ -1.08
TVP23C-202ENST00000419890 WDR17Q8IZU2 1322 aa8.29□□□□□ -1.08
TVP23C-202ENST00000419890 IGSF1Q8N6C5 1336 aa8.29□□□□□ -1.08
TVP23C-202ENST00000419890 NFAT5O94916 1531 aa8.29□□□□□ -1.08
TVP23C-202ENST00000419890 HIP1O00291 1037 aa8.29□□□□□ -1.08
TVP23C-202ENST00000419890 GIGYF1O75420 1035 aaPredicted RBP8.29□□□□□ -1.08
TVP23C-202ENST00000419890 SYT1P21579 422 aa8.29□□□□□ -1.08
TVP23C-202ENST00000419890 GSK3AP49840 483 aa8.29□□□□□ -1.08
TVP23C-202ENST00000419890 KRT85P78386 507 aa8.29□□□□□ -1.08
TVP23C-202ENST00000419890 PLCB2Q00722 1185 aa8.29□□□□□ -1.08
TVP23C-202ENST00000419890 FLIIQ13045 1269 aa8.29□□□□□ -1.08
TVP23C-202ENST00000419890 RRS1Q15050 365 aaKnown RBP8.29□□□□□ -1.08
TVP23C-202ENST00000419890 RNF20Q5VTR2 975 aa8.29□□□□□ -1.08
TVP23C-202ENST00000419890 SULT6B1Q6IMI4 303 aa8.29□□□□□ -1.08
TVP23C-202ENST00000419890 CCDC125Q86Z20 511 aa8.29□□□□□ -1.08
TVP23C-202ENST00000419890 TDRD7Q8NHU6 1098 aaKnown RBP8.29□□□□□ -1.08
TVP23C-202ENST00000419890 ANKRD24Q8TF21 1146 aa8.29□□□□□ -1.08
TVP23C-202ENST00000419890 IP6K1Q92551 441 aa8.29□□□□□ -1.08
TVP23C-202ENST00000419890 KIF1BPQ96EK5 621 aa8.29□□□□□ -1.08
TVP23C-202ENST00000419890 SNRKQ9NRH2 765 aa8.29□□□□□ -1.08
TVP23C-202ENST00000419890 TSPYL4Q9UJ04 414 aa8.29□□□□□ -1.08
TVP23C-202ENST00000419890 HDAC5Q9UQL6 1122 aa8.29□□□□□ -1.08
TVP23C-202ENST00000419890 CNPY2Q9Y2B0 182 aa8.29□□□□□ -1.08
TVP23C-202ENST00000419890 SNX14Q9Y5W7 946 aa8.29□□□□□ -1.08
TVP23C-202ENST00000419890 COL18A1P39060 1754 aa8.29□□□□□ -1.08
TVP23C-202ENST00000419890 RFX7Q2KHR2 1363 aa8.28□□□□□ -1.08
TVP23C-202ENST00000419890 KIF2AO00139 706 aaPredicted RBP8.28□□□□□ -1.08
TVP23C-202ENST00000419890 GLRX3O76003 335 aaKnown RBP8.28□□□□□ -1.08
TVP23C-202ENST00000419890 TUBB4AP04350 444 aa8.28□□□□□ -1.08
TVP23C-202ENST00000419890 AK2P54819 239 aa8.28□□□□□ -1.08
TVP23C-202ENST00000419890 SF3B2Q13435 895 aaKnown RBP8.28□□□□□ -1.08
TVP23C-202ENST00000419890 ANKRD1Q15327 319 aa8.28□□□□□ -1.08
TVP23C-202ENST00000419890 MAP3K11Q16584 847 aa8.28□□□□□ -1.08
TVP23C-202ENST00000419890 KRT24Q2M2I5 525 aa8.28□□□□□ -1.08
TVP23C-202ENST00000419890 SLFNL1Q499Z3 407 aa8.28□□□□□ -1.08
TVP23C-202ENST00000419890 SARM1Q6SZW1 724 aa8.28□□□□□ -1.08
TVP23C-202ENST00000419890 PI4K2BQ8TCG2 481 aa8.28□□□□□ -1.08
TVP23C-202ENST00000419890 SPIRE2Q8WWL2 714 aa8.28□□□□□ -1.08
TVP23C-202ENST00000419890 CARD10Q9BWT7 1032 aa8.28□□□□□ -1.08
TVP23C-202ENST00000419890 SCAND2PQ9GZW5 306 aaPredicted RBP8.28□□□□□ -1.08
TVP23C-202ENST00000419890 NUP62CLQ9H1M0 184 aa8.28□□□□□ -1.08
TVP23C-202ENST00000419890 KCNF1Q9H3M0 494 aa8.28□□□□□ -1.08
TVP23C-202ENST00000419890 TTC12Q9H892 705 aaPredicted RBP8.28□□□□□ -1.08
TVP23C-202ENST00000419890 MTMR6Q9Y217 621 aa8.28□□□□□ -1.08
TVP23C-202ENST00000419890 EXOC6BQ9Y2D4 811 aa8.28□□□□□ -1.08
TVP23C-202ENST00000419890 OVOS2A0A0G2JMS6 1433 aa8.28□□□□□ -1.08
TVP23C-202ENST00000419890 MAP3K19Q56UN5 1328 aa8.28□□□□□ -1.08
TVP23C-202ENST00000419890 MRC1P22897 1456 aa8.27□□□□□ -1.09
TVP23C-202ENST00000419890 ADH1CP00326 375 aa8.27□□□□□ -1.09
TVP23C-202ENST00000419890 UBTFL1P0CB47 393 aaPredicted RBP8.27□□□□□ -1.09
TVP23C-202ENST00000419890 NDUFV2P19404 249 aa8.27□□□□□ -1.09
TVP23C-202ENST00000419890 HOXC9P31274 260 aa8.27□□□□□ -1.09
TVP23C-202ENST00000419890 WDR4P57081 412 aaKnown RBP8.27□□□□□ -1.09
TVP23C-202ENST00000419890 MTX1Q13505 466 aa8.27□□□□□ -1.09
TVP23C-202ENST00000419890 DCTN1Q14203 1278 aa8.27□□□□□ -1.09
TVP23C-202ENST00000419890 DDB1Q16531 1140 aa8.27□□□□□ -1.09
TVP23C-202ENST00000419890 RUFY3Q7L099 469 aa8.27□□□□□ -1.09
TVP23C-202ENST00000419890 PLA2G4DQ86XP0 818 aa8.27□□□□□ -1.09
TVP23C-202ENST00000419890 RILPL2Q969X0 211 aa8.27□□□□□ -1.09
TVP23C-202ENST00000419890 UPF3BQ9BZI7 483 aaKnown RBP8.27□□□□□ -1.09
TVP23C-202ENST00000419890 LTN1O94822 1766 aa8.27□□□□□ -1.09
TVP23C-202ENST00000419890 PNMA6EA0A0J9YXQ4 647 aa8.26□□□□□ -1.09
TVP23C-202ENST00000419890 MOXD2PA6NHM9 499 aa8.26□□□□□ -1.09
TVP23C-202ENST00000419890 EXOC5O00471 708 aa8.26□□□□□ -1.09
TVP23C-202ENST00000419890 CTAGE5O15320 804 aa8.26□□□□□ -1.09
TVP23C-202ENST00000419890 PSMA5P28066 241 aa8.26□□□□□ -1.09
TVP23C-202ENST00000419890 KCNJ6P48051 423 aa8.26□□□□□ -1.09
TVP23C-202ENST00000419890 TYRO3Q06418 890 aa8.26□□□□□ -1.09
TVP23C-202ENST00000419890 SCARF1Q14162 830 aa8.26□□□□□ -1.09
TVP23C-202ENST00000419890 SUZ12Q15022 739 aaKnown RBP8.26□□□□□ -1.09
TVP23C-202ENST00000419890 DESI1Q6ICB0 168 aa8.26□□□□□ -1.09
TVP23C-202ENST00000419890 FAM196AQ6ZSG2 479 aa8.26□□□□□ -1.09
TVP23C-202ENST00000419890 ERC1Q8IUD2 1116 aa8.26□□□□□ -1.09
TVP23C-202ENST00000419890 PRR7Q8TB68 274 aa8.26□□□□□ -1.09
TVP23C-202ENST00000419890 RHPN1Q8TCX5 695 aa8.26□□□□□ -1.09
TVP23C-202ENST00000419890 GPATCH3Q96I76 525 aa8.26□□□□□ -1.09
TVP23C-202ENST00000419890 CDCA7Q9BWT1 371 aaPredicted RBP8.26□□□□□ -1.09
TVP23C-202ENST00000419890 HYPKQ9NX55 129 aa8.26□□□□□ -1.09
TVP23C-202ENST00000419890 CYP46A1Q9Y6A2 500 aa8.26□□□□□ -1.09
TVP23C-202ENST00000419890 CCDC66A2RUB6 948 aa8.25□□□□□ -1.09
TVP23C-202ENST00000419890 FIBPO43427 364 aa8.25□□□□□ -1.09
TVP23C-202ENST00000419890 TRIM37O94972 964 aa8.25□□□□□ -1.09
TVP23C-202ENST00000419890 GJB2P29033 226 aa8.25□□□□□ -1.09
TVP23C-202ENST00000419890 NCBP1Q09161 790 aaKnown RBP8.25□□□□□ -1.09
TVP23C-202ENST00000419890 ATP2B3Q16720 1220 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms