RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 CAP1Q01518 475 aa9.97□□□□□ -0.81
HLA-DPA1-241ENST00000417724 VGLL4Q14135 290 aa9.97□□□□□ -0.81
HLA-DPA1-241ENST00000417724 UBE4AQ14139 1066 aa9.97□□□□□ -0.81
HLA-DPA1-241ENST00000417724 ZNF594Q96JF6 807 aaPredicted RBP9.97□□□□□ -0.81
HLA-DPA1-241ENST00000417724 TEPSINQ96N21 525 aa9.97□□□□□ -0.81
HLA-DPA1-241ENST00000417724 TMEM39BQ9GZU3 492 aa9.97□□□□□ -0.81
HLA-DPA1-241ENST00000417724 COLQQ9Y215 455 aaPredicted RBP9.97□□□□□ -0.81
HLA-DPA1-241ENST00000417724 PTCH2Q9Y6C5 1203 aa9.97□□□□□ -0.81
HLA-DPA1-241ENST00000417724 A0A1B0GUL6 1792 aa9.96□□□□□ -0.81
HLA-DPA1-241ENST00000417724 OTOFQ9HC10 1997 aa9.96□□□□□ -0.81
HLA-DPA1-241ENST00000417724 GRM8O00222 908 aa9.96□□□□□ -0.82
HLA-DPA1-241ENST00000417724 TLR2O60603 784 aa9.96□□□□□ -0.82
HLA-DPA1-241ENST00000417724 VAMP4O75379 141 aa9.96□□□□□ -0.82
HLA-DPA1-241ENST00000417724 GNRH1P01148 92 aa9.96□□□□□ -0.82
HLA-DPA1-241ENST00000417724 CETPP11597 493 aa9.96□□□□□ -0.82
HLA-DPA1-241ENST00000417724 CRKP46108 304 aa9.96□□□□□ -0.82
HLA-DPA1-241ENST00000417724 GYG1P46976 350 aa9.96□□□□□ -0.82
HLA-DPA1-241ENST00000417724 HDLBPQ00341 1268 aaKnown RBP9.96□□□□□ -0.82
HLA-DPA1-241ENST00000417724 NCBP3Q53F19 620 aaKnown RBP9.96□□□□□ -0.82
HLA-DPA1-241ENST00000417724 BEND3Q5T5X7 828 aa9.96□□□□□ -0.82
HLA-DPA1-241ENST00000417724 ERO1BQ86YB8 467 aa9.96□□□□□ -0.82
HLA-DPA1-241ENST00000417724 FAM43AQ8N2R8 423 aa9.96□□□□□ -0.82
HLA-DPA1-241ENST00000417724 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.96□□□□□ -0.82
HLA-DPA1-241ENST00000417724 CNKSR2Q8WXI2 1034 aa9.96□□□□□ -0.82
HLA-DPA1-241ENST00000417724 HOOK2Q96ED9 719 aa9.96□□□□□ -0.82
HLA-DPA1-241ENST00000417724 OTUD5Q96G74 571 aa9.96□□□□□ -0.82
HLA-DPA1-241ENST00000417724 FAM84BQ96KN1 310 aaPredicted RBP9.96□□□□□ -0.82
HLA-DPA1-241ENST00000417724 ZCCHC17Q9NP64 241 aaKnown RBP9.96□□□□□ -0.82
HLA-DPA1-241ENST00000417724 C9orf78Q9NZ63 289 aaPredicted RBP9.96□□□□□ -0.82
HLA-DPA1-241ENST00000417724 SPDYE5A6NIY4 337 aa9.95□□□□□ -0.82
HLA-DPA1-241ENST00000417724 F6X3S4 739 aa9.95□□□□□ -0.82
HLA-DPA1-241ENST00000417724 PRMT2P55345 433 aa9.95□□□□□ -0.82
HLA-DPA1-241ENST00000417724 SNAPC2Q13487 334 aa9.95□□□□□ -0.82
HLA-DPA1-241ENST00000417724 EPHA10Q5JZY3 1008 aa9.95□□□□□ -0.82
HLA-DPA1-241ENST00000417724 VPS37DQ86XT2 251 aa9.95□□□□□ -0.82
HLA-DPA1-241ENST00000417724 TRIOBPQ9H2D6 2365 aa9.95□□□□□ -0.82
HLA-DPA1-241ENST00000417724 HTTP42858 3142 aa9.95□□□□□ -0.82
HLA-DPA1-241ENST00000417724 H0YGN5 161 aa9.94□□□□□ -0.82
HLA-DPA1-241ENST00000417724 FRAT2O75474 233 aaPredicted RBP9.94□□□□□ -0.82
HLA-DPA1-241ENST00000417724 MYCP01106 439 aaPredicted RBP9.94□□□□□ -0.82
HLA-DPA1-241ENST00000417724 LACTBP83111 547 aaPredicted RBP9.94□□□□□ -0.82
HLA-DPA1-241ENST00000417724 CDAN1Q8IWY9 1227 aa9.94□□□□□ -0.82
HLA-DPA1-241ENST00000417724 TBC1D22AQ8WUA7 517 aa9.94□□□□□ -0.82
HLA-DPA1-241ENST00000417724 TEKT1Q969V4 418 aa9.94□□□□□ -0.82
HLA-DPA1-241ENST00000417724 MRIQ9BWK5 157 aa9.94□□□□□ -0.82
HLA-DPA1-241ENST00000417724 TMOD2Q9NZR1 351 aa9.94□□□□□ -0.82
HLA-DPA1-241ENST00000417724 MKI67P46013 3256 aaKnown RBP9.94□□□□□ -0.82
HLA-DPA1-241ENST00000417724 MROH5Q6ZUA9 1318 aa9.93□□□□□ -0.82
HLA-DPA1-241ENST00000417724 FANCIQ9NVI1 1328 aa9.93□□□□□ -0.82
HLA-DPA1-241ENST00000417724 BTBD19C9JJ37 291 aa9.93□□□□□ -0.82
HLA-DPA1-241ENST00000417724 ALDH1L1O75891 902 aa9.93□□□□□ -0.82
HLA-DPA1-241ENST00000417724 HOXD10P28358 340 aa9.93□□□□□ -0.82
HLA-DPA1-241ENST00000417724 EXOSC9Q06265 439 aaKnown RBP9.93□□□□□ -0.82
HLA-DPA1-241ENST00000417724 CAVIN4Q5BKX8 364 aa9.93□□□□□ -0.82
HLA-DPA1-241ENST00000417724 FKBP1CQ5VVH2 108 aa9.93□□□□□ -0.82
HLA-DPA1-241ENST00000417724 DCAF15Q66K64 600 aa9.93□□□□□ -0.82
HLA-DPA1-241ENST00000417724 FBXO33Q7Z6M2 555 aa9.93□□□□□ -0.82
HLA-DPA1-241ENST00000417724 FAM83AQ86UY5 434 aa9.93□□□□□ -0.82
HLA-DPA1-241ENST00000417724 WDR63Q8IWG1 891 aa9.93□□□□□ -0.82
HLA-DPA1-241ENST00000417724 SH3TC2Q8TF17 1288 aa9.93□□□□□ -0.82
HLA-DPA1-241ENST00000417724 ZKSCAN4Q969J2 545 aaPredicted RBP9.93□□□□□ -0.82
HLA-DPA1-241ENST00000417724 WRNIP1Q96S55 665 aa9.93□□□□□ -0.82
HLA-DPA1-241ENST00000417724 RIPOR2Q9Y4F9 1068 aa9.93□□□□□ -0.82
HLA-DPA1-241ENST00000417724 CENPFP49454 3210 aa9.93□□□□□ -0.82
HLA-DPA1-241ENST00000417724 ARAP2Q8WZ64 1704 aa9.93□□□□□ -0.82
HLA-DPA1-241ENST00000417724 IRF6O14896 467 aa9.92□□□□□ -0.82
HLA-DPA1-241ENST00000417724 CHAF1AQ13111 956 aaPredicted RBP9.92□□□□□ -0.82
HLA-DPA1-241ENST00000417724 PPIL2Q13356 520 aa9.92□□□□□ -0.82
HLA-DPA1-241ENST00000417724 NKX2-3Q8TAU0 364 aa9.92□□□□□ -0.82
HLA-DPA1-241ENST00000417724 DPF3Q92784 378 aa9.92□□□□□ -0.82
HLA-DPA1-241ENST00000417724 ZDHHC15Q96MV8 337 aa9.92□□□□□ -0.82
HLA-DPA1-241ENST00000417724 PUS3Q9BZE2 481 aaKnown RBP9.92□□□□□ -0.82
HLA-DPA1-241ENST00000417724 ARHGAP39Q9C0H5 1083 aa9.92□□□□□ -0.82
HLA-DPA1-241ENST00000417724 SRCIN1Q9C0H9 1055 aa9.92□□□□□ -0.82
HLA-DPA1-241ENST00000417724 IQSEC3Q9UPP2 1182 aaPredicted RBP9.92□□□□□ -0.82
HLA-DPA1-241ENST00000417724 SNCAIPQ9Y6H5 919 aa9.92□□□□□ -0.82
HLA-DPA1-241ENST00000417724 MAST3O60307 1309 aa9.91□□□□□ -0.82
HLA-DPA1-241ENST00000417724 PSMC4P43686 418 aa9.91□□□□□ -0.82
HLA-DPA1-241ENST00000417724 CACNB3P54284 484 aa9.91□□□□□ -0.82
HLA-DPA1-241ENST00000417724 PPATQ06203 517 aa9.91□□□□□ -0.82
HLA-DPA1-241ENST00000417724 GRIK5Q16478 980 aa9.91□□□□□ -0.82
HLA-DPA1-241ENST00000417724 SLC4A10Q6U841 1118 aa9.91□□□□□ -0.82
HLA-DPA1-241ENST00000417724 C17orf99Q6UX52 265 aa9.91□□□□□ -0.82
HLA-DPA1-241ENST00000417724 SRRDQ9UH36 339 aa9.91□□□□□ -0.82
HLA-DPA1-241ENST00000417724 SUGT1Q9Y2Z0 365 aa9.91□□□□□ -0.82
HLA-DPA1-241ENST00000417724 AK9Q5TCS8 1911 aa9.91□□□□□ -0.82
HLA-DPA1-241ENST00000417724 PDE8BO95263 885 aa9.9□□□□□ -0.82
HLA-DPA1-241ENST00000417724 FMNL1O95466 1100 aaPredicted RBP9.9□□□□□ -0.82
HLA-DPA1-241ENST00000417724 CCDC184Q52MB2 194 aa9.9□□□□□ -0.82
HLA-DPA1-241ENST00000417724 METTL24Q5JXM2 366 aa9.9□□□□□ -0.82
HLA-DPA1-241ENST00000417724 APOBEC3HQ6NTF7 200 aaKnown RBP9.9□□□□□ -0.82
HLA-DPA1-241ENST00000417724 HHIPL2Q6UWX4 724 aa9.9□□□□□ -0.82
HLA-DPA1-241ENST00000417724 CHRDL2Q6WN34 429 aa9.9□□□□□ -0.82
HLA-DPA1-241ENST00000417724 ANKRD23Q86SG2 305 aa9.9□□□□□ -0.82
HLA-DPA1-241ENST00000417724 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.9□□□□□ -0.82
HLA-DPA1-241ENST00000417724 RAET1EQ8TD07 263 aa9.9□□□□□ -0.82
HLA-DPA1-241ENST00000417724 SUCLG2Q96I99 432 aa9.9□□□□□ -0.82
HLA-DPA1-241ENST00000417724 HTATIP2Q9BUP3 242 aa9.9□□□□□ -0.82
HLA-DPA1-241ENST00000417724 ZNF341Q9BYN7 854 aa9.9□□□□□ -0.82
HLA-DPA1-241ENST00000417724 BIN2Q9UBW5 565 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms