RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 IREB2P48200 963 aaKnown RBP22.98■■□□□ 1.27
VPS16-204ENST00000417508 CHAF1AQ13111 956 aaPredicted RBP22.98■■□□□ 1.27
VPS16-204ENST00000417508 SPRYD7Q5W111 196 aa22.98■■□□□ 1.27
VPS16-204ENST00000417508 ATG9AQ7Z3C6 839 aa22.98■■□□□ 1.27
VPS16-204ENST00000417508 TDRD3Q9H7E2 651 aaKnown RBP22.98■■□□□ 1.27
VPS16-204ENST00000417508 CEP126Q9P2H0 1117 aa22.98■■□□□ 1.27
VPS16-204ENST00000417508 ARAP2Q8WZ64 1704 aa22.97■■□□□ 1.27
VPS16-204ENST00000417508 GNAI3P08754 354 aa22.97■■□□□ 1.27
VPS16-204ENST00000417508 TNNI2P48788 182 aa22.97■■□□□ 1.27
VPS16-204ENST00000417508 NBPF12Q5TAG4 269 aaPredicted RBP22.97■■□□□ 1.27
VPS16-204ENST00000417508 TEKT1Q969V4 418 aa22.97■■□□□ 1.27
VPS16-204ENST00000417508 MAST3O60307 1309 aa22.97■■□□□ 1.27
VPS16-204ENST00000417508 ZBTB48P10074 688 aaPredicted RBP22.96■■□□□ 1.27
VPS16-204ENST00000417508 NOM1Q5C9Z4 860 aaKnown RBP22.96■■□□□ 1.27
VPS16-204ENST00000417508 WDR66Q8TBY9 1149 aa22.96■■□□□ 1.27
VPS16-204ENST00000417508 LRRFIP2Q9Y608 721 aaKnown RBP22.96■■□□□ 1.27
VPS16-204ENST00000417508 CCDC85CA6NKD9 419 aa22.95■■□□□ 1.26
VPS16-204ENST00000417508 USP2O75604 605 aaPredicted RBP22.95■■□□□ 1.26
VPS16-204ENST00000417508 ALDH1A1P00352 501 aa22.95■■□□□ 1.26
VPS16-204ENST00000417508 IL15P40933 162 aaPredicted RBP22.95■■□□□ 1.26
VPS16-204ENST00000417508 AOX1Q06278 1338 aa22.95■■□□□ 1.26
VPS16-204ENST00000417508 CFHR5Q9BXR6 569 aa22.95■■□□□ 1.26
VPS16-204ENST00000417508 COPRSQ9NQ92 184 aa22.95■■□□□ 1.26
VPS16-204ENST00000417508 GNL3LQ9NVN8 582 aaKnown RBP22.95■■□□□ 1.26
VPS16-204ENST00000417508 MANSC4A6NHS7 340 aaPredicted RBP22.94■■□□□ 1.26
VPS16-204ENST00000417508 HHIPL2Q6UWX4 724 aa22.94■■□□□ 1.26
VPS16-204ENST00000417508 ANKRD13AQ8IZ07 590 aa22.94■■□□□ 1.26
VPS16-204ENST00000417508 ZDHHC15Q96MV8 337 aa22.94■■□□□ 1.26
VPS16-204ENST00000417508 ZBTB22O15209 634 aa22.93■■□□□ 1.26
VPS16-204ENST00000417508 GRIK5Q16478 980 aa22.93■■□□□ 1.26
VPS16-204ENST00000417508 ATP2B3Q16720 1220 aa22.93■■□□□ 1.26
VPS16-204ENST00000417508 MEIS3Q99687 375 aa22.93■■□□□ 1.26
VPS16-204ENST00000417508 SIL1Q9H173 461 aa22.93■■□□□ 1.26
VPS16-204ENST00000417508 SSC5DA1L4H1 1573 aa22.93■■□□□ 1.26
VPS16-204ENST00000417508 MKRN3Q13064 507 aaKnown RBP22.92■■□□□ 1.26
VPS16-204ENST00000417508 FKBP1CQ5VVH2 108 aa22.92■■□□□ 1.26
VPS16-204ENST00000417508 CTU1Q7Z7A3 348 aaKnown RBP22.92■■□□□ 1.26
VPS16-204ENST00000417508 TEPSINQ96N21 525 aa22.92■■□□□ 1.26
VPS16-204ENST00000417508 TMOD2Q9NZR1 351 aa22.92■■□□□ 1.26
VPS16-204ENST00000417508 FZD1Q9UP38 647 aa22.92■■□□□ 1.26
VPS16-204ENST00000417508 TCP10L2B9ZVM9 353 aa22.91■■□□□ 1.26
VPS16-204ENST00000417508 TBC1D8O95759 1140 aa22.91■■□□□ 1.26
VPS16-204ENST00000417508 ATF7IPQ6VMQ6 1270 aa22.91■■□□□ 1.26
VPS16-204ENST00000417508 WNK4Q96J92 1243 aa22.91■■□□□ 1.26
VPS16-204ENST00000417508 SEMA3EO15041 775 aa22.9■■□□□ 1.26
VPS16-204ENST00000417508 RGS19P49795 217 aa22.9■■□□□ 1.26
VPS16-204ENST00000417508 MTX1Q13505 466 aa22.9■■□□□ 1.26
VPS16-204ENST00000417508 PKN2Q16513 984 aaKnown RBP22.9■■□□□ 1.26
VPS16-204ENST00000417508 HOOK2Q96ED9 719 aa22.9■■□□□ 1.26
VPS16-204ENST00000417508 CLMNQ96JQ2 1002 aa22.9■■□□□ 1.26
VPS16-204ENST00000417508 MYH13Q9UKX3 1938 aa22.89■■□□□ 1.25
VPS16-204ENST00000417508 OTUD7BQ6GQQ9 843 aa22.89■■□□□ 1.25
VPS16-204ENST00000417508 APOBEC3HQ6NTF7 200 aaKnown RBP22.89■■□□□ 1.25
VPS16-204ENST00000417508 FAM83AQ86UY5 434 aa22.89■■□□□ 1.25
VPS16-204ENST00000417508 DENND2AQ9ULE3 1009 aa22.89■■□□□ 1.25
VPS16-204ENST00000417508 GPR25O00155 361 aa22.88■■□□□ 1.25
VPS16-204ENST00000417508 TRIM27P14373 513 aa22.88■■□□□ 1.25
VPS16-204ENST00000417508 DIEXFQ68CQ4 756 aaKnown RBP22.88■■□□□ 1.25
VPS16-204ENST00000417508 ZNF296Q8WUU4 475 aaPredicted RBP22.88■■□□□ 1.25
VPS16-204ENST00000417508 TMEM39BQ9GZU3 492 aa22.88■■□□□ 1.25
VPS16-204ENST00000417508 PA2G4Q9UQ80 394 aaKnown RBP22.88■■□□□ 1.25
VPS16-204ENST00000417508 SRGAP3O43295 1099 aa22.87■■□□□ 1.25
VPS16-204ENST00000417508 BCAR3O75815 825 aa22.87■■□□□ 1.25
VPS16-204ENST00000417508 MAP3K9P80192 1104 aa22.87■■□□□ 1.25
VPS16-204ENST00000417508 IFNL1Q8IU54 200 aa22.87■■□□□ 1.25
VPS16-204ENST00000417508 MIER1Q8N108 512 aa22.87■■□□□ 1.25
VPS16-204ENST00000417508 FRAT1Q92837 279 aaPredicted RBP22.87■■□□□ 1.25
VPS16-204ENST00000417508 AKAP2Q9Y2D5 859 aa22.87■■□□□ 1.25
VPS16-204ENST00000417508 SALL1Q9NSC2 1324 aa22.86■■□□□ 1.25
VPS16-204ENST00000417508 GNAI2P04899 355 aa22.85■■□□□ 1.25
VPS16-204ENST00000417508 LDHBP07195 334 aaKnown RBP22.85■■□□□ 1.25
VPS16-204ENST00000417508 ZGPATQ8N5A5 531 aaKnown RBP22.85■■□□□ 1.25
VPS16-204ENST00000417508 LAMB1P07942 1786 aa22.85■■□□□ 1.25
VPS16-204ENST00000417508 TESPA1A2RU30 521 aaPredicted RBP22.84■■□□□ 1.25
VPS16-204ENST00000417508 FKTNO75072 461 aa22.84■■□□□ 1.25
VPS16-204ENST00000417508 HNRNPUQ00839 825 aaKnown RBP eCLIP22.84■■□□□ 1.25
VPS16-204ENST00000417508 ZKSCAN2Q63HK3 967 aa22.84■■□□□ 1.25
VPS16-204ENST00000417508 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.84■■□□□ 1.25
VPS16-204ENST00000417508 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.84■■□□□ 1.25
VPS16-204ENST00000417508 CSADQ9Y600 493 aa22.84■■□□□ 1.25
VPS16-204ENST00000417508 PHKA1P46020 1223 aa22.83■■□□□ 1.25
VPS16-204ENST00000417508 CCDC102BQ68D86 513 aa22.83■■□□□ 1.25
VPS16-204ENST00000417508 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.83■■□□□ 1.25
VPS16-204ENST00000417508 ELP3Q9H9T3 547 aa22.83■■□□□ 1.25
VPS16-204ENST00000417508 PDS5AQ29RF7 1337 aaKnown RBP22.82■■□□□ 1.24
VPS16-204ENST00000417508 GJA5P36382 358 aa22.82■■□□□ 1.24
VPS16-204ENST00000417508 CACNB3P54284 484 aa22.82■■□□□ 1.24
VPS16-204ENST00000417508 TIMM10P62072 90 aa22.82■■□□□ 1.24
VPS16-204ENST00000417508 DCAF15Q66K64 600 aa22.82■■□□□ 1.24
VPS16-204ENST00000417508 CDAN1Q8IWY9 1227 aa22.82■■□□□ 1.24
VPS16-204ENST00000417508 OPTNQ96CV9 577 aa22.82■■□□□ 1.24
VPS16-204ENST00000417508 RPAP1Q9BWH6 1393 aaPredicted RBP22.81■■□□□ 1.24
VPS16-204ENST00000417508 IGF2BP3O00425 579 aaKnown RBP eCLIP22.81■■□□□ 1.24
VPS16-204ENST00000417508 PRDX5P30044 214 aa22.81■■□□□ 1.24
VPS16-204ENST00000417508 MLLT1Q03111 559 aaPredicted RBP22.81■■□□□ 1.24
VPS16-204ENST00000417508 FAM151AQ8WW52 585 aa22.81■■□□□ 1.24
VPS16-204ENST00000417508 CLUAP1Q96AJ1 413 aa22.81■■□□□ 1.24
VPS16-204ENST00000417508 DAGLAQ9Y4D2 1042 aa22.81■■□□□ 1.24
VPS16-204ENST00000417508 A0A1B0GUL7 405 aa22.8■■□□□ 1.24
VPS16-204ENST00000417508 GTF2A2P52657 109 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms