RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 PUM3Q15397 648 aaKnown RBP27.29■■□□□ 1.96
ACTB-203ENST00000417101 R3HDMLQ9H3Y0 253 aa27.29■■□□□ 1.96
ACTB-203ENST00000417101 TCP10L2B9ZVM9 353 aa27.28■■□□□ 1.96
ACTB-203ENST00000417101 EYA2O00167 538 aa27.28■■□□□ 1.96
ACTB-203ENST00000417101 IFIT1P09914 478 aaKnown RBP27.28■■□□□ 1.96
ACTB-203ENST00000417101 FGFR2P21802 821 aa27.28■■□□□ 1.96
ACTB-203ENST00000417101 NOM1Q5C9Z4 860 aaKnown RBP27.28■■□□□ 1.96
ACTB-203ENST00000417101 NOB1Q9ULX3 412 aaKnown RBP27.28■■□□□ 1.96
ACTB-203ENST00000417101 ARAP2Q8WZ64 1704 aa27.27■■□□□ 1.96
ACTB-203ENST00000417101 INHBEP58166 350 aa27.27■■□□□ 1.96
ACTB-203ENST00000417101 CFHR5Q9BXR6 569 aa27.27■■□□□ 1.96
ACTB-203ENST00000417101 KIF16BQ96L93 1317 aa27.26■■□□□ 1.95
ACTB-203ENST00000417101 CT47B1P0C2W7 299 aaPredicted RBP27.26■■□□□ 1.95
ACTB-203ENST00000417101 UBTFL1P0CB47 393 aaPredicted RBP27.26■■□□□ 1.95
ACTB-203ENST00000417101 HDLBPQ00341 1268 aaKnown RBP27.26■■□□□ 1.95
ACTB-203ENST00000417101 CDAN1Q8IWY9 1227 aa27.26■■□□□ 1.95
ACTB-203ENST00000417101 ANKRD13AQ8IZ07 590 aa27.26■■□□□ 1.95
ACTB-203ENST00000417101 TEPSINQ96N21 525 aa27.26■■□□□ 1.95
ACTB-203ENST00000417101 ALDH1A1P00352 501 aa27.25■■□□□ 1.95
ACTB-203ENST00000417101 IFNL1Q8IU54 200 aa27.25■■□□□ 1.95
ACTB-203ENST00000417101 TEKT1Q969V4 418 aa27.25■■□□□ 1.95
ACTB-203ENST00000417101 TMEM39BQ9GZU3 492 aa27.25■■□□□ 1.95
ACTB-203ENST00000417101 FKTNO75072 461 aa27.24■■□□□ 1.95
ACTB-203ENST00000417101 GJA5P36382 358 aa27.24■■□□□ 1.95
ACTB-203ENST00000417101 TNNI2P48788 182 aa27.24■■□□□ 1.95
ACTB-203ENST00000417101 SOX10P56693 466 aa27.24■■□□□ 1.95
ACTB-203ENST00000417101 PKN2Q16513 984 aaKnown RBP27.24■■□□□ 1.95
ACTB-203ENST00000417101 ATG9AQ7Z3C6 839 aa27.24■■□□□ 1.95
ACTB-203ENST00000417101 HPS5Q9UPZ3 1129 aa27.24■■□□□ 1.95
ACTB-203ENST00000417101 CCER2I3L3R5 266 aa27.23■■□□□ 1.95
ACTB-203ENST00000417101 IGF2BP3O00425 579 aaKnown RBP eCLIP27.23■■□□□ 1.95
ACTB-203ENST00000417101 SLC5A1P13866 664 aa27.23■■□□□ 1.95
ACTB-203ENST00000417101 LPIN2Q92539 896 aa27.23■■□□□ 1.95
ACTB-203ENST00000417101 API5Q9BZZ5 524 aaKnown RBP27.23■■□□□ 1.95
ACTB-203ENST00000417101 SIL1Q9H173 461 aa27.23■■□□□ 1.95
ACTB-203ENST00000417101 CACNB3P54284 484 aa27.22■■□□□ 1.95
ACTB-203ENST00000417101 ELP3Q9H9T3 547 aa27.22■■□□□ 1.95
ACTB-203ENST00000417101 ZDHHC15Q96MV8 337 aa27.21■■□□□ 1.95
ACTB-203ENST00000417101 SUGT1Q9Y2Z0 365 aa27.21■■□□□ 1.95
ACTB-203ENST00000417101 MRIQ9BWK5 157 aa27.2■■□□□ 1.94
ACTB-203ENST00000417101 MAST3O60307 1309 aa27.19■■□□□ 1.94
ACTB-203ENST00000417101 APOBEC3HQ6NTF7 200 aaKnown RBP27.19■■□□□ 1.94
ACTB-203ENST00000417101 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.19■■□□□ 1.94
ACTB-203ENST00000417101 OPTNQ96CV9 577 aa27.19■■□□□ 1.94
ACTB-203ENST00000417101 TMOD2Q9NZR1 351 aa27.19■■□□□ 1.94
ACTB-203ENST00000417101 LRRFIP2Q9Y608 721 aaKnown RBP27.19■■□□□ 1.94
ACTB-203ENST00000417101 CIAO1O76071 339 aa27.18■■□□□ 1.94
ACTB-203ENST00000417101 RARSP54136 660 aaKnown RBP27.18■■□□□ 1.94
ACTB-203ENST00000417101 WDR66Q8TBY9 1149 aa27.18■■□□□ 1.94
ACTB-203ENST00000417101 CEP126Q9P2H0 1117 aa27.18■■□□□ 1.94
ACTB-203ENST00000417101 FBXO3Q9UK99 471 aa27.18■■□□□ 1.94
ACTB-203ENST00000417101 TNRC18O15417 2968 aaPredicted RBP27.18■■□□□ 1.94
ACTB-203ENST00000417101 MAP3K9P80192 1104 aa27.17■■□□□ 1.94
ACTB-203ENST00000417101 ATP2B3Q16720 1220 aa27.17■■□□□ 1.94
ACTB-203ENST00000417101 OTUD7BQ6GQQ9 843 aa27.17■■□□□ 1.94
ACTB-203ENST00000417101 FBXO46Q6PJ61 603 aaPredicted RBP27.17■■□□□ 1.94
ACTB-203ENST00000417101 HDAC5Q9UQL6 1122 aa27.17■■□□□ 1.94
ACTB-203ENST00000417101 VGLL4Q14135 290 aa27.16■■□□□ 1.94
ACTB-203ENST00000417101 HHIPL2Q6UWX4 724 aa27.16■■□□□ 1.94
ACTB-203ENST00000417101 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.16■■□□□ 1.94
ACTB-203ENST00000417101 CNKSR2Q8WXI2 1034 aa27.16■■□□□ 1.94
ACTB-203ENST00000417101 MEIS3Q99687 375 aa27.16■■□□□ 1.94
ACTB-203ENST00000417101 PA2G4Q9UQ80 394 aaKnown RBP27.16■■□□□ 1.94
ACTB-203ENST00000417101 OTOFQ9HC10 1997 aa27.15■■□□□ 1.94
ACTB-203ENST00000417101 FKBP1CQ5VVH2 108 aa27.15■■□□□ 1.94
ACTB-203ENST00000417101 PTPN18Q99952 460 aa27.15■■□□□ 1.94
ACTB-203ENST00000417101 CSADQ9Y600 493 aa27.15■■□□□ 1.94
ACTB-203ENST00000417101 TESPA1A2RU30 521 aaPredicted RBP27.14■■□□□ 1.94
ACTB-203ENST00000417101 IL15P40933 162 aaPredicted RBP27.14■■□□□ 1.94
ACTB-203ENST00000417101 CRHR2Q13324 411 aa27.14■■□□□ 1.94
ACTB-203ENST00000417101 FAM83AQ86UY5 434 aa27.14■■□□□ 1.94
ACTB-203ENST00000417101 LAMB1P07942 1786 aa27.13■■□□□ 1.93
ACTB-203ENST00000417101 MS4A4AQ96JQ5 239 aa27.13■■□□□ 1.93
ACTB-203ENST00000417101 GNL3LQ9NVN8 582 aaKnown RBP27.13■■□□□ 1.93
ACTB-203ENST00000417101 OTUD5Q96G74 571 aa27.12■■□□□ 1.93
ACTB-203ENST00000417101 PRDX5P30044 214 aa27.11■■□□□ 1.93
ACTB-203ENST00000417101 DIXDC1Q155Q3 683 aa27.11■■□□□ 1.93
ACTB-203ENST00000417101 INTS3Q68E01 1043 aaKnown RBP27.11■■□□□ 1.93
ACTB-203ENST00000417101 BRI3BPQ8WY22 251 aa27.11■■□□□ 1.93
ACTB-203ENST00000417101 ARHGAP45Q92619 1136 aa27.11■■□□□ 1.93
ACTB-203ENST00000417101 COPRSQ9NQ92 184 aa27.11■■□□□ 1.93
ACTB-203ENST00000417101 TRIM17Q9Y577 477 aa27.11■■□□□ 1.93
ACTB-203ENST00000417101 HTTP42858 3142 aa27.11■■□□□ 1.93
ACTB-203ENST00000417101 PHKA1P46020 1223 aa27.1■■□□□ 1.93
ACTB-203ENST00000417101 HOOK2Q96ED9 719 aa27.1■■□□□ 1.93
ACTB-203ENST00000417101 WRNIP1Q96S55 665 aa27.1■■□□□ 1.93
ACTB-203ENST00000417101 DAGLAQ9Y4D2 1042 aa27.1■■□□□ 1.93
ACTB-203ENST00000417101 CCL15-CCL14A0A0B4J2E2 113 aa27.09■■□□□ 1.93
ACTB-203ENST00000417101 LDHBP07195 334 aaKnown RBP27.09■■□□□ 1.93
ACTB-203ENST00000417101 GTF2A2P52657 109 aa27.09■■□□□ 1.93
ACTB-203ENST00000417101 CCL15Q16663 113 aa27.09■■□□□ 1.93
ACTB-203ENST00000417101 OTOP1Q7RTM1 612 aa27.09■■□□□ 1.93
ACTB-203ENST00000417101 MYH13Q9UKX3 1938 aa27.09■■□□□ 1.93
ACTB-203ENST00000417101 SPDYE5A6NIY4 337 aa27.08■■□□□ 1.93
ACTB-203ENST00000417101 GNAI3P08754 354 aa27.08■■□□□ 1.93
ACTB-203ENST00000417101 ADORA1P30542 326 aa27.08■■□□□ 1.93
ACTB-203ENST00000417101 CD99L2Q8TCZ2 262 aa27.08■■□□□ 1.93
ACTB-203ENST00000417101 ZKSCAN4Q969J2 545 aaPredicted RBP27.08■■□□□ 1.93
ACTB-203ENST00000417101 ERO1AQ96HE7 468 aa27.08■■□□□ 1.93
ACTB-203ENST00000417101 DENND2AQ9ULE3 1009 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms