RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 DHX32Q7L7V1 743 aaKnown RBP13.56□□□□□ -0.24
UBR4-205ENST00000417040 TTC14Q96N46 770 aa13.56□□□□□ -0.24
UBR4-205ENST00000417040 AMOTL2Q9Y2J4 779 aa13.56□□□□□ -0.24
UBR4-205ENST00000417040 NPHP3Q7Z494 1330 aa13.56□□□□□ -0.24
UBR4-205ENST00000417040 TNNC1P63316 161 aa13.56□□□□□ -0.24
UBR4-205ENST00000417040 KLHL7Q8IXQ5 586 aa13.56□□□□□ -0.24
UBR4-205ENST00000417040 TTC21BQ7Z4L5 1316 aa13.56□□□□□ -0.24
UBR4-205ENST00000417040 KDM2BQ8NHM5 1336 aa13.56□□□□□ -0.24
UBR4-205ENST00000417040 ANKRD36BQ8N2N9 1353 aa13.56□□□□□ -0.24
UBR4-205ENST00000417040 MAGEB6P1A0A0J9YX57 407 aa13.56□□□□□ -0.24
UBR4-205ENST00000417040 BEND3Q5T5X7 828 aa13.56□□□□□ -0.24
UBR4-205ENST00000417040 C8orf74Q6P047 294 aa13.56□□□□□ -0.24
UBR4-205ENST00000417040 CERS3Q8IU89 383 aa13.56□□□□□ -0.24
UBR4-205ENST00000417040 CNGA4Q8IV77 575 aa13.56□□□□□ -0.24
UBR4-205ENST00000417040 PARD3Q8TEW0 1356 aa13.56□□□□□ -0.24
UBR4-205ENST00000417040 BICDL2A1A5D9 508 aa13.56□□□□□ -0.24
UBR4-205ENST00000417040 BAG3O95817 575 aa13.56□□□□□ -0.24
UBR4-205ENST00000417040 ZNF445P59923 1031 aa13.56□□□□□ -0.24
UBR4-205ENST00000417040 PLVAPQ9BX97 442 aa13.56□□□□□ -0.24
UBR4-205ENST00000417040 TTC21AQ8NDW8 1320 aa13.55□□□□□ -0.24
UBR4-205ENST00000417040 NSD2O96028 1365 aa13.55□□□□□ -0.24
UBR4-205ENST00000417040 POLR2DO15514 142 aaKnown RBP13.55□□□□□ -0.24
UBR4-205ENST00000417040 ADAMTS2O95450 1211 aa13.55□□□□□ -0.24
UBR4-205ENST00000417040 SNRPA1P09661 255 aaKnown RBP13.55□□□□□ -0.24
UBR4-205ENST00000417040 G2E3Q7L622 706 aa13.55□□□□□ -0.24
UBR4-205ENST00000417040 ZBTB7BO15156 539 aaPredicted RBP13.55□□□□□ -0.24
UBR4-205ENST00000417040 UQCRFS1P1P0C7P4 283 aa13.55□□□□□ -0.24
UBR4-205ENST00000417040 ADKP55263 362 aaKnown RBP13.55□□□□□ -0.24
UBR4-205ENST00000417040 TRMT44Q8IYL2 757 aaKnown RBP13.55□□□□□ -0.24
UBR4-205ENST00000417040 PHF8Q9UPP1 1060 aa13.55□□□□□ -0.24
UBR4-205ENST00000417040 TNNI2P48788 182 aa13.55□□□□□ -0.24
UBR4-205ENST00000417040 TTC19Q6DKK2 380 aaPredicted RBP13.55□□□□□ -0.24
UBR4-205ENST00000417040 PHACTR3Q96KR7 559 aa13.55□□□□□ -0.24
UBR4-205ENST00000417040 FAM227BQ96M60 508 aa13.55□□□□□ -0.24
UBR4-205ENST00000417040 CYP26C1Q6V0L0 522 aa13.55□□□□□ -0.24
UBR4-205ENST00000417040 KSR1Q8IVT5 923 aa13.55□□□□□ -0.24
UBR4-205ENST00000417040 ERMNQ8TAM6 284 aa13.55□□□□□ -0.24
UBR4-205ENST00000417040 KIF14Q15058 1648 aa13.55□□□□□ -0.24
UBR4-205ENST00000417040 MAGI1Q96QZ7 1491 aaPredicted RBP13.55□□□□□ -0.24
UBR4-205ENST00000417040 E7EVH7 732 aa13.54□□□□□ -0.24
UBR4-205ENST00000417040 BMP15O95972 392 aa13.54□□□□□ -0.24
UBR4-205ENST00000417040 LRMPQ12912 555 aa13.54□□□□□ -0.24
UBR4-205ENST00000417040 SEPT14Q6ZU15 432 aa13.54□□□□□ -0.24
UBR4-205ENST00000417040 B4GALNT4Q76KP1 1039 aa13.54□□□□□ -0.24
UBR4-205ENST00000417040 ATP6V0A2Q9Y487 856 aa13.54□□□□□ -0.24
UBR4-205ENST00000417040 FAM13AO94988 1023 aa13.54□□□□□ -0.24
UBR4-205ENST00000417040 FRMD3A2A2Y4 597 aa13.54□□□□□ -0.24
UBR4-205ENST00000417040 DTHD1Q6ZMT9 781 aa13.54□□□□□ -0.24
UBR4-205ENST00000417040 BRAPQ7Z569 592 aa13.54□□□□□ -0.24
UBR4-205ENST00000417040 STMN2Q93045 179 aa13.54□□□□□ -0.24
UBR4-205ENST00000417040 DNAI2Q9GZS0 605 aa13.54□□□□□ -0.24
UBR4-205ENST00000417040 PLB1Q6P1J6 1458 aa13.54□□□□□ -0.24
UBR4-205ENST00000417040 PKP1Q13835 747 aa13.54□□□□□ -0.24
UBR4-205ENST00000417040 KLHDC4Q8TBB5 520 aa13.54□□□□□ -0.24
UBR4-205ENST00000417040 CDC5LQ99459 802 aaKnown RBP13.54□□□□□ -0.24
UBR4-205ENST00000417040 TTC41PQ6P2S7 1318 aa13.54□□□□□ -0.24
UBR4-205ENST00000417040 GOLGA6BA6NDN3 693 aa13.53□□□□□ -0.24
UBR4-205ENST00000417040 B4E1Z4 1266 aa13.53□□□□□ -0.24
UBR4-205ENST00000417040 GABPB1Q06547 395 aaPredicted RBP13.53□□□□□ -0.24
UBR4-205ENST00000417040 EIF4A2Q14240 407 aaKnown RBP13.53□□□□□ -0.24
UBR4-205ENST00000417040 MGARPQ8TDB4 240 aa13.53□□□□□ -0.24
UBR4-205ENST00000417040 LEO1Q8WVC0 666 aaPredicted RBP13.53□□□□□ -0.24
UBR4-205ENST00000417040 TAB2Q9NYJ8 693 aa13.53□□□□□ -0.24
UBR4-205ENST00000417040 MTRF1LQ9UGC7 380 aaKnown RBP13.53□□□□□ -0.24
UBR4-205ENST00000417040 STK38LQ9Y2H1 464 aa13.53□□□□□ -0.24
UBR4-205ENST00000417040 SYNRGQ9UMZ2 1314 aa13.53□□□□□ -0.24
UBR4-205ENST00000417040 ZFYP08048 801 aaPredicted RBP13.53□□□□□ -0.24
UBR4-205ENST00000417040 ZNF131P52739 623 aa13.53□□□□□ -0.24
UBR4-205ENST00000417040 TPD52P55327 224 aaPredicted RBP13.53□□□□□ -0.24
UBR4-205ENST00000417040 IFNL2Q8IZJ0 200 aa13.53□□□□□ -0.24
UBR4-205ENST00000417040 SREK1Q8WXA9 508 aaKnown RBP13.53□□□□□ -0.24
UBR4-205ENST00000417040 PRPHP41219 470 aa13.53□□□□□ -0.24
UBR4-205ENST00000417040 PNOCQ13519 176 aa13.53□□□□□ -0.24
UBR4-205ENST00000417040 NAA16Q6N069 864 aaPredicted RBP13.53□□□□□ -0.24
UBR4-205ENST00000417040 PNMA8AQ86V59 439 aaPredicted RBP13.53□□□□□ -0.24
UBR4-205ENST00000417040 SLF2Q8IX21 1173 aa13.53□□□□□ -0.24
UBR4-205ENST00000417040 TMTC2Q8N394 836 aa13.53□□□□□ -0.24
UBR4-205ENST00000417040 SLF1Q9BQI6 1058 aa13.53□□□□□ -0.24
UBR4-205ENST00000417040 TACO1Q9BSH4 297 aaKnown RBP13.53□□□□□ -0.24
UBR4-205ENST00000417040 CPSF2Q9P2I0 782 aaKnown RBP13.53□□□□□ -0.24
UBR4-205ENST00000417040 JAK2O60674 1132 aa13.53□□□□□ -0.24
UBR4-205ENST00000417040 IDI1Q13907 227 aa13.53□□□□□ -0.24
UBR4-205ENST00000417040 KSR2Q6VAB6 950 aa13.53□□□□□ -0.24
UBR4-205ENST00000417040 MYL10Q9BUA6 226 aa13.53□□□□□ -0.24
UBR4-205ENST00000417040 RAD50Q92878 1312 aa13.53□□□□□ -0.24
UBR4-205ENST00000417040 ERCC6LQ2NKX8 1250 aa13.53□□□□□ -0.24
UBR4-205ENST00000417040 DDX12PQ92771 950 aa13.53□□□□□ -0.24
UBR4-205ENST00000417040 NLRP12P59046 1061 aa13.52□□□□□ -0.24
UBR4-205ENST00000417040 STAMQ92783 540 aa13.52□□□□□ -0.24
UBR4-205ENST00000417040 LRRC59Q96AG4 307 aaKnown RBP13.52□□□□□ -0.24
UBR4-205ENST00000417040 PKD2L1Q9P0L9 805 aa13.52□□□□□ -0.24
UBR4-205ENST00000417040 KCNH3Q9ULD8 1083 aa13.52□□□□□ -0.24
UBR4-205ENST00000417040 DMRT2Q9Y5R5 561 aa13.52□□□□□ -0.24
UBR4-205ENST00000417040 KRT5P13647 590 aa13.52□□□□□ -0.24
UBR4-205ENST00000417040 TBC1D8BQ0IIM8 1120 aa13.52□□□□□ -0.24
UBR4-205ENST00000417040 ANO1Q5XXA6 986 aa13.52□□□□□ -0.24
UBR4-205ENST00000417040 BLZF1Q9H2G9 400 aa13.52□□□□□ -0.24
UBR4-205ENST00000417040 PPANQ9NQ55 473 aaKnown RBP13.52□□□□□ -0.24
UBR4-205ENST00000417040 TOPBP1Q92547 1522 aa13.52□□□□□ -0.24
UBR4-205ENST00000417040 PDE4DQ08499 809 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms