RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 CHST3Q7LGC8 479 aa14.87□□□□□ -0.03
LRRTM1-205ENST00000417012 TMC6Q7Z403 805 aa14.87□□□□□ -0.03
LRRTM1-205ENST00000417012 TICAM2Q86XR7 235 aa14.87□□□□□ -0.03
LRRTM1-205ENST00000417012 SYTL4Q96C24 671 aaPredicted RBP14.87□□□□□ -0.03
LRRTM1-205ENST00000417012 IL15P40933 162 aaPredicted RBP14.87□□□□□ -0.03
LRRTM1-205ENST00000417012 TCIRG1Q13488 830 aa14.87□□□□□ -0.03
LRRTM1-205ENST00000417012 LINC00301Q8NCQ3 95 aa14.87□□□□□ -0.03
LRRTM1-205ENST00000417012 XPO4Q9C0E2 1151 aaKnown RBP14.87□□□□□ -0.03
LRRTM1-205ENST00000417012 IFNKQ9P0W0 207 aa14.87□□□□□ -0.03
LRRTM1-205ENST00000417012 A0A0G2JLW4 131 aa14.86□□□□□ -0.03
LRRTM1-205ENST00000417012 GPTP24298 496 aa14.86□□□□□ -0.03
LRRTM1-205ENST00000417012 TAF3Q5VWG9 929 aa14.86□□□□□ -0.03
LRRTM1-205ENST00000417012 YEATS4O95619 227 aa14.86□□□□□ -0.03
LRRTM1-205ENST00000417012 HLFQ16534 295 aa14.86□□□□□ -0.03
LRRTM1-205ENST00000417012 TAF7LQ5H9L4 462 aa14.86□□□□□ -0.03
LRRTM1-205ENST00000417012 E4F1Q66K89 784 aaPredicted RBP14.86□□□□□ -0.03
LRRTM1-205ENST00000417012 C8orf76Q96K31 380 aa14.86□□□□□ -0.03
LRRTM1-205ENST00000417012 ISCA1Q9BUE6 129 aa14.86□□□□□ -0.03
LRRTM1-205ENST00000417012 MAST3O60307 1309 aa14.86□□□□□ -0.03
LRRTM1-205ENST00000417012 PSDA5PKW4 1024 aaPredicted RBP14.85□□□□□ -0.03
LRRTM1-205ENST00000417012 SLC3A2P08195 630 aaKnown RBP14.85□□□□□ -0.03
LRRTM1-205ENST00000417012 CCDC57Q2TAC2 916 aa14.85□□□□□ -0.03
LRRTM1-205ENST00000417012 PPP1R13BQ96KQ4 1090 aa14.85□□□□□ -0.03
LRRTM1-205ENST00000417012 SLFN14P0C7P3 912 aa14.85□□□□□ -0.03
LRRTM1-205ENST00000417012 FDPSP14324 419 aaKnown RBP14.85□□□□□ -0.03
LRRTM1-205ENST00000417012 POLR3EQ9NVU0 708 aa14.85□□□□□ -0.03
LRRTM1-205ENST00000417012 CLIC4Q9Y696 253 aa14.85□□□□□ -0.03
LRRTM1-205ENST00000417012 SPTLC2O15270 562 aa14.84□□□□□ -0.03
LRRTM1-205ENST00000417012 RNF113AO15541 343 aaKnown RBP14.84□□□□□ -0.03
LRRTM1-205ENST00000417012 ADORA1P30542 326 aa14.84□□□□□ -0.03
LRRTM1-205ENST00000417012 KCNJ6P48051 423 aa14.84□□□□□ -0.03
LRRTM1-205ENST00000417012 FKBP4Q02790 459 aaKnown RBP eCLIP14.84□□□□□ -0.03
LRRTM1-205ENST00000417012 DHX16O60231 1041 aaKnown RBP14.84□□□□□ -0.03
LRRTM1-205ENST00000417012 TUBB4AP04350 444 aa14.84□□□□□ -0.03
LRRTM1-205ENST00000417012 POLR3DP05423 398 aaPredicted RBP14.84□□□□□ -0.03
LRRTM1-205ENST00000417012 IFIT1P09914 478 aaKnown RBP14.84□□□□□ -0.03
LRRTM1-205ENST00000417012 ARMCX5Q6P1M9 558 aa14.84□□□□□ -0.03
LRRTM1-205ENST00000417012 KIF6Q6ZMV9 814 aa14.84□□□□□ -0.03
LRRTM1-205ENST00000417012 BRAPQ7Z569 592 aa14.84□□□□□ -0.03
LRRTM1-205ENST00000417012 SLC4A9Q96Q91 983 aa14.84□□□□□ -0.03
LRRTM1-205ENST00000417012 L2HGDHQ9H9P8 463 aa14.84□□□□□ -0.03
LRRTM1-205ENST00000417012 GPR108Q9NPR9 543 aa14.84□□□□□ -0.03
LRRTM1-205ENST00000417012 ITGB4P16144 1822 aa14.84□□□□□ -0.03
LRRTM1-205ENST00000417012 BIN1O00499 593 aa14.84□□□□□ -0.03
LRRTM1-205ENST00000417012 NLRP12P59046 1061 aa14.84□□□□□ -0.03
LRRTM1-205ENST00000417012 TERF2Q15554 542 aa14.84□□□□□ -0.03
LRRTM1-205ENST00000417012 OTUD7BQ6GQQ9 843 aa14.84□□□□□ -0.03
LRRTM1-205ENST00000417012 SYT10Q6XYQ8 523 aa14.84□□□□□ -0.03
LRRTM1-205ENST00000417012 SYNE3Q6ZMZ3 975 aa14.83□□□□□ -0.04
LRRTM1-205ENST00000417012 FBXL16Q8N461 479 aa14.83□□□□□ -0.04
LRRTM1-205ENST00000417012 A0A0G2JS52 829 aa14.83□□□□□ -0.04
LRRTM1-205ENST00000417012 NPHP1O15259 732 aa14.83□□□□□ -0.04
LRRTM1-205ENST00000417012 EVCP57679 992 aa14.83□□□□□ -0.04
LRRTM1-205ENST00000417012 MYSM1Q5VVJ2 828 aa14.83□□□□□ -0.04
LRRTM1-205ENST00000417012 CEP126Q9P2H0 1117 aa14.83□□□□□ -0.04
LRRTM1-205ENST00000417012 NHSL1Q5SYE7 1610 aa14.83□□□□□ -0.04
LRRTM1-205ENST00000417012 CCP110O43303 1012 aa14.82□□□□□ -0.04
LRRTM1-205ENST00000417012 ZNF202O95125 648 aa14.82□□□□□ -0.04
LRRTM1-205ENST00000417012 STARD3NLO95772 234 aa14.82□□□□□ -0.04
LRRTM1-205ENST00000417012 TTLL5Q6EMB2 1281 aa14.82□□□□□ -0.04
LRRTM1-205ENST00000417012 FBXO18Q8NFZ0 1043 aa14.82□□□□□ -0.04
LRRTM1-205ENST00000417012 ORC3Q9UBD5 711 aaPredicted RBP14.82□□□□□ -0.04
LRRTM1-205ENST00000417012 GOLGA8BA8MQT2 603 aa14.82□□□□□ -0.04
LRRTM1-205ENST00000417012 CPLX1O14810 134 aa14.82□□□□□ -0.04
LRRTM1-205ENST00000417012 LRRFIP1Q32MZ4 808 aaKnown RBP14.82□□□□□ -0.04
LRRTM1-205ENST00000417012 HOMER1Q86YM7 354 aa14.82□□□□□ -0.04
LRRTM1-205ENST00000417012 FAM53CQ9NYF3 392 aa14.82□□□□□ -0.04
LRRTM1-205ENST00000417012 NEDD4P46934 1319 aa14.82□□□□□ -0.04
LRRTM1-205ENST00000417012 IMMTQ16891 758 aaKnown RBP14.82□□□□□ -0.04
LRRTM1-205ENST00000417012 HSP90AB3PQ58FF7 597 aa14.82□□□□□ -0.04
LRRTM1-205ENST00000417012 GORABQ5T7V8 394 aa14.82□□□□□ -0.04
LRRTM1-205ENST00000417012 PI16Q6UXB8 463 aa14.82□□□□□ -0.04
LRRTM1-205ENST00000417012 KLF18A0A0U1RQI7 1052 aa14.81□□□□□ -0.04
LRRTM1-205ENST00000417012 M0R2C6 588 aa14.81□□□□□ -0.04
LRRTM1-205ENST00000417012 CIAO1O76071 339 aa14.81□□□□□ -0.04
LRRTM1-205ENST00000417012 SCARF1Q14162 830 aa14.81□□□□□ -0.04
LRRTM1-205ENST00000417012 ERCC6LQ2NKX8 1250 aa14.81□□□□□ -0.04
LRRTM1-205ENST00000417012 XAGE2Q96GT9 111 aa14.81□□□□□ -0.04
LRRTM1-205ENST00000417012 GPHNQ9NQX3 736 aaPredicted RBP14.81□□□□□ -0.04
LRRTM1-205ENST00000417012 ZBTB38Q8NAP3 1195 aaPredicted RBP14.81□□□□□ -0.04
LRRTM1-205ENST00000417012 ZBTB1Q9Y2K1 713 aa14.81□□□□□ -0.04
LRRTM1-205ENST00000417012 IKBKBO14920 756 aa14.8□□□□□ -0.04
LRRTM1-205ENST00000417012 PRC1O43663 620 aa14.8□□□□□ -0.04
LRRTM1-205ENST00000417012 H2AFXP16104 143 aaPredicted RBP14.8□□□□□ -0.04
LRRTM1-205ENST00000417012 PFKFB1P16118 471 aa14.8□□□□□ -0.04
LRRTM1-205ENST00000417012 LMOD1P29536 600 aaPredicted RBP14.8□□□□□ -0.04
LRRTM1-205ENST00000417012 FANCCQ00597 558 aa14.8□□□□□ -0.04
LRRTM1-205ENST00000417012 IFIT5Q13325 482 aaKnown RBP14.8□□□□□ -0.04
LRRTM1-205ENST00000417012 BMS1Q14692 1282 aaKnown RBP14.8□□□□□ -0.04
LRRTM1-205ENST00000417012 ANO1Q5XXA6 986 aa14.8□□□□□ -0.04
LRRTM1-205ENST00000417012 TBC1D2BQ9UPU7 963 aa14.8□□□□□ -0.04
LRRTM1-205ENST00000417012 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.8□□□□□ -0.04
LRRTM1-205ENST00000417012 SPEF2Q9C093 1822 aa14.8□□□□□ -0.04
LRRTM1-205ENST00000417012 MAP3K15Q6ZN16 1313 aa14.8□□□□□ -0.04
LRRTM1-205ENST00000417012 CCDC66A2RUB6 948 aa14.8□□□□□ -0.04
LRRTM1-205ENST00000417012 PCCAP05165 728 aaPredicted RBP14.8□□□□□ -0.04
LRRTM1-205ENST00000417012 CMA1P23946 247 aa14.8□□□□□ -0.04
LRRTM1-205ENST00000417012 HAND2P61296 217 aa14.8□□□□□ -0.04
LRRTM1-205ENST00000417012 NCAPHQ15003 741 aa14.8□□□□□ -0.04
LRRTM1-205ENST00000417012 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms