RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 GNAI3P08754 354 aa22.29■■□□□ 1.16
CPNE1-210ENST00000416778 SLC5A1P13866 664 aa22.29■■□□□ 1.16
CPNE1-210ENST00000416778 SPDYE2Q495Y8 402 aa22.29■■□□□ 1.16
CPNE1-210ENST00000416778 NBPF12Q5TAG4 269 aaPredicted RBP22.29■■□□□ 1.16
CPNE1-210ENST00000416778 ATF7IPQ6VMQ6 1270 aa22.29■■□□□ 1.16
CPNE1-210ENST00000416778 ANGEL1Q9UNK9 670 aaKnown RBP22.29■■□□□ 1.16
CPNE1-210ENST00000416778 IL15P40933 162 aaPredicted RBP22.28■■□□□ 1.16
CPNE1-210ENST00000416778 TM4SF4P48230 202 aa22.28■■□□□ 1.16
CPNE1-210ENST00000416778 FRAT1Q92837 279 aaPredicted RBP22.28■■□□□ 1.16
CPNE1-210ENST00000416778 USP2O75604 605 aaPredicted RBP22.27■■□□□ 1.16
CPNE1-210ENST00000416778 ABHD8Q96I13 439 aa22.27■■□□□ 1.16
CPNE1-210ENST00000416778 SUGT1Q9Y2Z0 365 aa22.27■■□□□ 1.16
CPNE1-210ENST00000416778 PPP1R12BO60237 982 aaPredicted RBP22.26■■□□□ 1.15
CPNE1-210ENST00000416778 MTX1Q13505 466 aa22.26■■□□□ 1.15
CPNE1-210ENST00000416778 SLC10A4Q96EP9 437 aa22.26■■□□□ 1.15
CPNE1-210ENST00000416778 COL1A1P02452 1464 aaPredicted RBP22.26■■□□□ 1.15
CPNE1-210ENST00000416778 UNCXA6NJT0 531 aa22.25■■□□□ 1.15
CPNE1-210ENST00000416778 ATP2B3Q16720 1220 aa22.25■■□□□ 1.15
CPNE1-210ENST00000416778 CLUAP1Q96AJ1 413 aa22.25■■□□□ 1.15
CPNE1-210ENST00000416778 TEPSINQ96N21 525 aa22.25■■□□□ 1.15
CPNE1-210ENST00000416778 SRGAP3O43295 1099 aa22.24■■□□□ 1.15
CPNE1-210ENST00000416778 SPRYD7Q5W111 196 aa22.24■■□□□ 1.15
CPNE1-210ENST00000416778 APOBEC3HQ6NTF7 200 aaKnown RBP22.24■■□□□ 1.15
CPNE1-210ENST00000416778 WDR66Q8TBY9 1149 aa22.24■■□□□ 1.15
CPNE1-210ENST00000416778 TEKT1Q969V4 418 aa22.24■■□□□ 1.15
CPNE1-210ENST00000416778 ZDHHC15Q96MV8 337 aa22.24■■□□□ 1.15
CPNE1-210ENST00000416778 TCP10L2B9ZVM9 353 aa22.23■■□□□ 1.15
CPNE1-210ENST00000416778 TIMM10P62072 90 aa22.23■■□□□ 1.15
CPNE1-210ENST00000416778 MKRN3Q13064 507 aaKnown RBP22.23■■□□□ 1.15
CPNE1-210ENST00000416778 TNFAIP1Q13829 316 aa22.23■■□□□ 1.15
CPNE1-210ENST00000416778 HHIPL2Q6UWX4 724 aa22.23■■□□□ 1.15
CPNE1-210ENST00000416778 SSC5DA1L4H1 1573 aa22.22■■□□□ 1.15
CPNE1-210ENST00000416778 ZBTB22O15209 634 aa22.22■■□□□ 1.15
CPNE1-210ENST00000416778 GNAI2P04899 355 aa22.22■■□□□ 1.15
CPNE1-210ENST00000416778 ZKSCAN2Q63HK3 967 aa22.22■■□□□ 1.15
CPNE1-210ENST00000416778 CLMNQ96JQ2 1002 aa22.22■■□□□ 1.15
CPNE1-210ENST00000416778 CASP8AP2Q9UKL3 1982 aa22.21■■□□□ 1.15
CPNE1-210ENST00000416778 CDAN1Q8IWY9 1227 aa22.21■■□□□ 1.15
CPNE1-210ENST00000416778 TMEM57Q8N5G2 664 aa22.21■■□□□ 1.15
CPNE1-210ENST00000416778 MCOLN1Q9GZU1 580 aa22.21■■□□□ 1.15
CPNE1-210ENST00000416778 TMEM39BQ9GZU3 492 aa22.21■■□□□ 1.15
CPNE1-210ENST00000416778 GNL3LQ9NVN8 582 aaKnown RBP22.21■■□□□ 1.15
CPNE1-210ENST00000416778 ADORA1P30542 326 aa22.2■■□□□ 1.14
CPNE1-210ENST00000416778 PHKA1P46020 1223 aa22.2■■□□□ 1.14
CPNE1-210ENST00000416778 IREB2P48200 963 aaKnown RBP22.2■■□□□ 1.14
CPNE1-210ENST00000416778 TBC1D8O95759 1140 aa22.19■■□□□ 1.14
CPNE1-210ENST00000416778 TNNI2P48788 182 aa22.19■■□□□ 1.14
CPNE1-210ENST00000416778 TFCP2Q12800 502 aa22.19■■□□□ 1.14
CPNE1-210ENST00000416778 DGKZQ13574 1117 aa22.19■■□□□ 1.14
CPNE1-210ENST00000416778 CCDC102BQ68D86 513 aa22.19■■□□□ 1.14
CPNE1-210ENST00000416778 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.19■■□□□ 1.14
CPNE1-210ENST00000416778 MAST3O60307 1309 aa22.19■■□□□ 1.14
CPNE1-210ENST00000416778 SEMA3EO15041 775 aa22.18■■□□□ 1.14
CPNE1-210ENST00000416778 CACNB3P54284 484 aa22.18■■□□□ 1.14
CPNE1-210ENST00000416778 INHBEP58166 350 aa22.18■■□□□ 1.14
CPNE1-210ENST00000416778 FKBP1CQ5VVH2 108 aa22.18■■□□□ 1.14
CPNE1-210ENST00000416778 ANKRD13AQ8IZ07 590 aa22.18■■□□□ 1.14
CPNE1-210ENST00000416778 WNK4Q96J92 1243 aa22.18■■□□□ 1.14
CPNE1-210ENST00000416778 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.18■■□□□ 1.14
CPNE1-210ENST00000416778 DENND2AQ9ULE3 1009 aa22.18■■□□□ 1.14
CPNE1-210ENST00000416778 PNMA6EA0A0J9YXQ4 647 aa22.17■■□□□ 1.14
CPNE1-210ENST00000416778 ZBTB48P10074 688 aaPredicted RBP22.17■■□□□ 1.14
CPNE1-210ENST00000416778 SREBF2Q12772 1141 aa22.17■■□□□ 1.14
CPNE1-210ENST00000416778 FAM83AQ86UY5 434 aa22.17■■□□□ 1.14
CPNE1-210ENST00000416778 AKAP2Q9Y2D5 859 aa22.17■■□□□ 1.14
CPNE1-210ENST00000416778 SALL1Q9NSC2 1324 aa22.16■■□□□ 1.14
CPNE1-210ENST00000416778 MANSC4A6NHS7 340 aaPredicted RBP22.16■■□□□ 1.14
CPNE1-210ENST00000416778 PRDX5P30044 214 aa22.16■■□□□ 1.14
CPNE1-210ENST00000416778 GJA5P36382 358 aa22.16■■□□□ 1.14
CPNE1-210ENST00000416778 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.16■■□□□ 1.14
CPNE1-210ENST00000416778 XAGE2Q96GT9 111 aa22.16■■□□□ 1.14
CPNE1-210ENST00000416778 ZBED9Q6R2W3 1325 aa22.15■■□□□ 1.14
CPNE1-210ENST00000416778 A0A1B0GUL7 405 aa22.15■■□□□ 1.14
CPNE1-210ENST00000416778 MAP3K9P80192 1104 aa22.15■■□□□ 1.14
CPNE1-210ENST00000416778 ATP8B2P98198 1209 aa22.15■■□□□ 1.14
CPNE1-210ENST00000416778 DIXDC1Q155Q3 683 aa22.15■■□□□ 1.14
CPNE1-210ENST00000416778 CFHR5Q9BXR6 569 aa22.15■■□□□ 1.14
CPNE1-210ENST00000416778 R3HDMLQ9H3Y0 253 aa22.15■■□□□ 1.14
CPNE1-210ENST00000416778 ECM29Q5VYK3 1845 aa22.15■■□□□ 1.14
CPNE1-210ENST00000416778 AKAP11Q9UKA4 1901 aa22.14■■□□□ 1.14
CPNE1-210ENST00000416778 CCDC85CA6NKD9 419 aa22.14■■□□□ 1.13
CPNE1-210ENST00000416778 ZBTB7BO15156 539 aaPredicted RBP22.14■■□□□ 1.13
CPNE1-210ENST00000416778 LDHBP07195 334 aaKnown RBP22.14■■□□□ 1.13
CPNE1-210ENST00000416778 NOM1Q5C9Z4 860 aaKnown RBP22.14■■□□□ 1.13
CPNE1-210ENST00000416778 DAGLAQ9Y4D2 1042 aa22.14■■□□□ 1.13
CPNE1-210ENST00000416778 GPR25O00155 361 aa22.13■■□□□ 1.13
CPNE1-210ENST00000416778 RLBP1P12271 317 aa22.13■■□□□ 1.13
CPNE1-210ENST00000416778 G3BP1Q13283 466 aaKnown RBP eCLIP22.13■■□□□ 1.137e-8■□□□□ 11.2
CPNE1-210ENST00000416778 POLA2Q14181 598 aa22.13■■□□□ 1.13
CPNE1-210ENST00000416778 CDC42EP5Q6NZY7 148 aa22.13■■□□□ 1.13
CPNE1-210ENST00000416778 IFNL1Q8IU54 200 aa22.13■■□□□ 1.13
CPNE1-210ENST00000416778 ZNF296Q8WUU4 475 aaPredicted RBP22.13■■□□□ 1.13
CPNE1-210ENST00000416778 NEUROD6Q96NK8 337 aa22.13■■□□□ 1.13
CPNE1-210ENST00000416778 TMOD2Q9NZR1 351 aa22.13■■□□□ 1.13
CPNE1-210ENST00000416778 ALDH1A1P00352 501 aa22.12■■□□□ 1.13
CPNE1-210ENST00000416778 RASGRF1Q13972 1273 aa22.12■■□□□ 1.13
CPNE1-210ENST00000416778 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.12■■□□□ 1.138e-6■■□□□ 11.7
CPNE1-210ENST00000416778 ELP3Q9H9T3 547 aa22.12■■□□□ 1.13
CPNE1-210ENST00000416778 TESPA1A2RU30 521 aaPredicted RBP22.11■■□□□ 1.13
CPNE1-210ENST00000416778 MVPQ14764 893 aaKnown RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms