RNA–Protein interactions for RNA: ENST00000416581.1

LINC01398-201, Transcript of long intergenic non-protein coding RNA 1398, humanhuman

TSL 1 (best)

Gene LINC01398, Length 1,129 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01398-201ENST00000416581 DZIP1LQ8IYY4 767 aaKnown RBP16.75■□□□□ 0.27
LINC01398-201ENST00000416581 MRPL50Q8N5N7 158 aaKnown RBP16.75■□□□□ 0.27
LINC01398-201ENST00000416581 TEKT1Q969V4 418 aa16.75■□□□□ 0.27
LINC01398-201ENST00000416581 KAZALD1Q96I82 304 aa16.75■□□□□ 0.27
LINC01398-201ENST00000416581 MRIQ9BWK5 157 aa16.75■□□□□ 0.27
LINC01398-201ENST00000416581 ZNF70Q9UC06 446 aaPredicted RBP16.75■□□□□ 0.27
LINC01398-201ENST00000416581 FBXO3Q9UK99 471 aa16.75■□□□□ 0.27
LINC01398-201ENST00000416581 CT47B1P0C2W7 299 aaPredicted RBP16.74■□□□□ 0.27
LINC01398-201ENST00000416581 CRKP46108 304 aa16.74■□□□□ 0.27
LINC01398-201ENST00000416581 PUM3Q15397 648 aaKnown RBP16.74■□□□□ 0.27
LINC01398-201ENST00000416581 INTS3Q68E01 1043 aaKnown RBP16.74■□□□□ 0.27
LINC01398-201ENST00000416581 FBXO33Q7Z6M2 555 aa16.74■□□□□ 0.27
LINC01398-201ENST00000416581 JAG2Q9Y219 1238 aa16.74■□□□□ 0.27
LINC01398-201ENST00000416581 CSADQ9Y600 493 aa16.74■□□□□ 0.27
LINC01398-201ENST00000416581 OTOFQ9HC10 1997 aa16.74■□□□□ 0.27
LINC01398-201ENST00000416581 MYH13Q9UKX3 1938 aa16.73■□□□□ 0.27
LINC01398-201ENST00000416581 TESPA1A2RU30 521 aaPredicted RBP16.73■□□□□ 0.27
LINC01398-201ENST00000416581 USP2O75604 605 aaPredicted RBP16.73■□□□□ 0.27
LINC01398-201ENST00000416581 FKBP1CQ5VVH2 108 aa16.73■□□□□ 0.27
LINC01398-201ENST00000416581 CLMNQ96JQ2 1002 aa16.73■□□□□ 0.27
LINC01398-201ENST00000416581 PUS3Q9BZE2 481 aaKnown RBP16.73■□□□□ 0.27
LINC01398-201ENST00000416581 TDRD3Q9H7E2 651 aaKnown RBP16.73■□□□□ 0.27
LINC01398-201ENST00000416581 RPAP1Q9BWH6 1393 aaPredicted RBP16.72■□□□□ 0.27
LINC01398-201ENST00000416581 SLC5A1P13866 664 aa16.71■□□□□ 0.27
LINC01398-201ENST00000416581 GTF2A2P52657 109 aa16.71■□□□□ 0.27
LINC01398-201ENST00000416581 PRPF38BQ5VTL8 546 aaKnown RBP16.71■□□□□ 0.27
LINC01398-201ENST00000416581 FAM83AQ86UY5 434 aa16.71■□□□□ 0.27
LINC01398-201ENST00000416581 ANKRD44Q8N8A2 993 aa16.71■□□□□ 0.27
LINC01398-201ENST00000416581 VGLL2Q8N8G2 317 aa16.71■□□□□ 0.27
LINC01398-201ENST00000416581 WDR66Q8TBY9 1149 aa16.71■□□□□ 0.27
LINC01398-201ENST00000416581 ZDHHC15Q96MV8 337 aa16.71■□□□□ 0.27
LINC01398-201ENST00000416581 ZCCHC17Q9NP64 241 aaKnown RBP16.71■□□□□ 0.27
LINC01398-201ENST00000416581 TRIM17Q9Y577 477 aa16.71■□□□□ 0.27
LINC01398-201ENST00000416581 PCDHAC2Q9Y5I4 1007 aa16.71■□□□□ 0.27
LINC01398-201ENST00000416581 IGF2BP3O00425 579 aaKnown RBP eCLIP16.7■□□□□ 0.26
LINC01398-201ENST00000416581 MAP3K9P80192 1104 aa16.7■□□□□ 0.26
LINC01398-201ENST00000416581 CHAF1AQ13111 956 aaPredicted RBP16.7■□□□□ 0.26
LINC01398-201ENST00000416581 DCAF15Q66K64 600 aa16.7■□□□□ 0.26
LINC01398-201ENST00000416581 LPIN2Q92539 896 aa16.7■□□□□ 0.26
LINC01398-201ENST00000416581 OPTNQ96CV9 577 aa16.7■□□□□ 0.26
LINC01398-201ENST00000416581 TCP10L2B9ZVM9 353 aa16.69■□□□□ 0.26
LINC01398-201ENST00000416581 EYA2O00167 538 aa16.69■□□□□ 0.26
LINC01398-201ENST00000416581 LRRC24Q50LG9 513 aa16.69■□□□□ 0.26
LINC01398-201ENST00000416581 HHIPL2Q6UWX4 724 aa16.69■□□□□ 0.26
LINC01398-201ENST00000416581 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.69■□□□□ 0.26
LINC01398-201ENST00000416581 SSH1Q8WYL5 1049 aa16.69■□□□□ 0.26
LINC01398-201ENST00000416581 TEPSINQ96N21 525 aa16.69■□□□□ 0.26
LINC01398-201ENST00000416581 USP44Q9H0E7 712 aa16.69■□□□□ 0.26
LINC01398-201ENST00000416581 FZD1Q9UP38 647 aa16.69■□□□□ 0.26
LINC01398-201ENST00000416581 RBBP6Q7Z6E9 1792 aaKnown RBP16.69■□□□□ 0.26
LINC01398-201ENST00000416581 FGFR2P21802 821 aa16.68■□□□□ 0.26
LINC01398-201ENST00000416581 SP3Q02447 781 aa16.68■□□□□ 0.26
LINC01398-201ENST00000416581 SLFN5Q08AF3 891 aa16.68■□□□□ 0.26
LINC01398-201ENST00000416581 CRHR2Q13324 411 aa16.68■□□□□ 0.26
LINC01398-201ENST00000416581 OTOP1Q7RTM1 612 aa16.68■□□□□ 0.26
LINC01398-201ENST00000416581 ELP3Q9H9T3 547 aa16.68■□□□□ 0.26
LINC01398-201ENST00000416581 ZFYVE28Q9HCC9 887 aa16.68■□□□□ 0.26
LINC01398-201ENST00000416581 SMC4Q9NTJ3 1288 aa16.68■□□□□ 0.26
LINC01398-201ENST00000416581 GNL3LQ9NVN8 582 aaKnown RBP16.68■□□□□ 0.26
LINC01398-201ENST00000416581 SPDYE5A6NIY4 337 aa16.67■□□□□ 0.26
LINC01398-201ENST00000416581 SEMA3EO15041 775 aa16.67■□□□□ 0.26
LINC01398-201ENST00000416581 ZBTB22O15209 634 aa16.67■□□□□ 0.26
LINC01398-201ENST00000416581 CIAO1O76071 339 aa16.67■□□□□ 0.26
LINC01398-201ENST00000416581 UBTFL1P0CB47 393 aaPredicted RBP16.67■□□□□ 0.26
LINC01398-201ENST00000416581 VGLL4Q14135 290 aa16.67■□□□□ 0.26
LINC01398-201ENST00000416581 TMEM39BQ9GZU3 492 aa16.67■□□□□ 0.26
LINC01398-201ENST00000416581 EFCC1Q9HA90 598 aa16.67■□□□□ 0.26
LINC01398-201ENST00000416581 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.67■□□□□ 0.26
LINC01398-201ENST00000416581 CCL15-CCL14A0A0B4J2E2 113 aa16.66■□□□□ 0.26
LINC01398-201ENST00000416581 CETPP11597 493 aa16.66■□□□□ 0.26
LINC01398-201ENST00000416581 TAF1CQ15572 869 aaPredicted RBP16.66■□□□□ 0.26
LINC01398-201ENST00000416581 CCL15Q16663 113 aa16.66■□□□□ 0.26
LINC01398-201ENST00000416581 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.66■□□□□ 0.26
LINC01398-201ENST00000416581 ERO1BQ86YB8 467 aa16.66■□□□□ 0.26
LINC01398-201ENST00000416581 ZGPATQ8N5A5 531 aaKnown RBP16.66■□□□□ 0.26
LINC01398-201ENST00000416581 API5Q9BZZ5 524 aaKnown RBP16.66■□□□□ 0.26
LINC01398-201ENST00000416581 R3HDMLQ9H3Y0 253 aa16.66■□□□□ 0.26
LINC01398-201ENST00000416581 IQSEC3Q9UPP2 1182 aaPredicted RBP16.66■□□□□ 0.26
LINC01398-201ENST00000416581 AOX1Q06278 1338 aa16.66■□□□□ 0.26
LINC01398-201ENST00000416581 TNRC18O15417 2968 aaPredicted RBP16.65■□□□□ 0.26
LINC01398-201ENST00000416581 GJA5P36382 358 aa16.65■□□□□ 0.26
LINC01398-201ENST00000416581 BCAMP50895 628 aa16.65■□□□□ 0.26
LINC01398-201ENST00000416581 GCC1Q96CN9 775 aa16.65■□□□□ 0.26
LINC01398-201ENST00000416581 MS4A4AQ96JQ5 239 aa16.65■□□□□ 0.26
LINC01398-201ENST00000416581 ZNF341Q9BYN7 854 aa16.65■□□□□ 0.26
LINC01398-201ENST00000416581 CEP126Q9P2H0 1117 aa16.65■□□□□ 0.26
LINC01398-201ENST00000416581 PTPN22Q9Y2R2 807 aa16.65■□□□□ 0.26
LINC01398-201ENST00000416581 CCER2I3L3R5 266 aa16.64■□□□□ 0.25
LINC01398-201ENST00000416581 GNRH1P01148 92 aa16.64■□□□□ 0.25
LINC01398-201ENST00000416581 SNAPC2Q13487 334 aa16.64■□□□□ 0.25
LINC01398-201ENST00000416581 KIF22Q14807 665 aa16.64■□□□□ 0.25
LINC01398-201ENST00000416581 OTUD5Q96G74 571 aa16.64■□□□□ 0.25
LINC01398-201ENST00000416581 WRNIP1Q96S55 665 aa16.64■□□□□ 0.25
LINC01398-201ENST00000416581 SALL1Q9NSC2 1324 aa16.64■□□□□ 0.25
LINC01398-201ENST00000416581 IL15P40933 162 aaPredicted RBP16.63■□□□□ 0.25
LINC01398-201ENST00000416581 RFX5P48382 616 aaPredicted RBP16.63■□□□□ 0.25
LINC01398-201ENST00000416581 PPIL2Q13356 520 aa16.63■□□□□ 0.25
LINC01398-201ENST00000416581 APOBEC3HQ6NTF7 200 aaKnown RBP16.63■□□□□ 0.25
LINC01398-201ENST00000416581 NBPF11Q86T75 865 aa16.63■□□□□ 0.25
LINC01398-201ENST00000416581 SLF2Q8IX21 1173 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms