RNA–Protein interactions for RNA: ENST00000416553.1

AP002856.2-201, humanhuman

TSL 3 BASIC

Gene AP002856.2, Length 584 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002856.2-201ENST00000416553 TDRD3Q9H7E2 651 aaKnown RBP16.8■□□□□ 0.28
AP002856.2-201ENST00000416553 ZNF70Q9UC06 446 aaPredicted RBP16.8■□□□□ 0.28
AP002856.2-201ENST00000416553 PPP2R3BQ9Y5P8 575 aa16.8■□□□□ 0.28
AP002856.2-201ENST00000416553 RLBP1P12271 317 aa16.79■□□□□ 0.28
AP002856.2-201ENST00000416553 ARMC9Q7Z3E5 817 aa16.79■□□□□ 0.28
AP002856.2-201ENST00000416553 SUGT1Q9Y2Z0 365 aa16.79■□□□□ 0.28
AP002856.2-201ENST00000416553 COL1A1P02452 1464 aaPredicted RBP16.79■□□□□ 0.28
AP002856.2-201ENST00000416553 ARAP2Q8WZ64 1704 aa16.79■□□□□ 0.28
AP002856.2-201ENST00000416553 PNMA6EA0A0J9YXQ4 647 aa16.78■□□□□ 0.28
AP002856.2-201ENST00000416553 ADORA1P30542 326 aa16.78■□□□□ 0.28
AP002856.2-201ENST00000416553 TIMM10P62072 90 aa16.78■□□□□ 0.28
AP002856.2-201ENST00000416553 TFCP2Q12800 502 aa16.78■□□□□ 0.28
AP002856.2-201ENST00000416553 RASA3Q14644 834 aa16.78■□□□□ 0.28
AP002856.2-201ENST00000416553 LDLRAD1Q5T700 205 aa16.78■□□□□ 0.28
AP002856.2-201ENST00000416553 FTSJ3Q8IY81 847 aaKnown RBP16.78■□□□□ 0.28
AP002856.2-201ENST00000416553 WDR66Q8TBY9 1149 aa16.78■□□□□ 0.28
AP002856.2-201ENST00000416553 CSRNP1Q96S65 589 aa16.78■□□□□ 0.28
AP002856.2-201ENST00000416553 GNL3LQ9NVN8 582 aaKnown RBP16.78■□□□□ 0.28
AP002856.2-201ENST00000416553 FZD1Q9UP38 647 aa16.78■□□□□ 0.28
AP002856.2-201ENST00000416553 PHKA1P46020 1223 aa16.77■□□□□ 0.28
AP002856.2-201ENST00000416553 SUPT20HL1Q3ZLR7 823 aa16.77■□□□□ 0.28
AP002856.2-201ENST00000416553 NBPF12Q5TAG4 269 aaPredicted RBP16.77■□□□□ 0.28
AP002856.2-201ENST00000416553 TEKT1Q969V4 418 aa16.77■□□□□ 0.28
AP002856.2-201ENST00000416553 ANGEL1Q9UNK9 670 aaKnown RBP16.77■□□□□ 0.28
AP002856.2-201ENST00000416553 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.77■□□□□ 0.28
AP002856.2-201ENST00000416553 ZBTB7BO15156 539 aaPredicted RBP16.76■□□□□ 0.27
AP002856.2-201ENST00000416553 TNFAIP1Q13829 316 aa16.76■□□□□ 0.27
AP002856.2-201ENST00000416553 MAP3K11Q16584 847 aa16.76■□□□□ 0.27
AP002856.2-201ENST00000416553 CCDC102BQ68D86 513 aa16.76■□□□□ 0.27
AP002856.2-201ENST00000416553 APOBEC3HQ6NTF7 200 aaKnown RBP16.76■□□□□ 0.27
AP002856.2-201ENST00000416553 ZDHHC15Q96MV8 337 aa16.76■□□□□ 0.27
AP002856.2-201ENST00000416553 AKAP2Q9Y2D5 859 aa16.76■□□□□ 0.27
AP002856.2-201ENST00000416553 MYH13Q9UKX3 1938 aa16.76■□□□□ 0.27
AP002856.2-201ENST00000416553 A0A1B0GUL7 405 aa16.75■□□□□ 0.27
AP002856.2-201ENST00000416553 TCP10L2B9ZVM9 353 aa16.75■□□□□ 0.27
AP002856.2-201ENST00000416553 SEMA3EO15041 775 aa16.75■□□□□ 0.27
AP002856.2-201ENST00000416553 ZBTB22O15209 634 aa16.75■□□□□ 0.27
AP002856.2-201ENST00000416553 PPP1R12BO60237 982 aaPredicted RBP16.75■□□□□ 0.27
AP002856.2-201ENST00000416553 ATP8B2P98198 1209 aa16.75■□□□□ 0.27
AP002856.2-201ENST00000416553 POLA2Q14181 598 aa16.75■□□□□ 0.27
AP002856.2-201ENST00000416553 HHIPL2Q6UWX4 724 aa16.75■□□□□ 0.27
AP002856.2-201ENST00000416553 ITPRIPQ8IWB1 547 aa16.75■□□□□ 0.27
AP002856.2-201ENST00000416553 REM2Q8IYK8 340 aaPredicted RBP16.75■□□□□ 0.27
AP002856.2-201ENST00000416553 RNF186Q9NXI6 227 aa16.75■□□□□ 0.27
AP002856.2-201ENST00000416553 DENND2AQ9ULE3 1009 aa16.75■□□□□ 0.27
AP002856.2-201ENST00000416553 SSC5DA1L4H1 1573 aa16.75■□□□□ 0.27
AP002856.2-201ENST00000416553 CASP8AP2Q9UKL3 1982 aa16.75■□□□□ 0.27
AP002856.2-201ENST00000416553 AKAP11Q9UKA4 1901 aa16.74■□□□□ 0.27
AP002856.2-201ENST00000416553 MAST3O60307 1309 aa16.74■□□□□ 0.27
AP002856.2-201ENST00000416553 USP2O75604 605 aaPredicted RBP16.74■□□□□ 0.27
AP002856.2-201ENST00000416553 G3BP1Q13283 466 aaKnown RBP eCLIP16.74■□□□□ 0.27
AP002856.2-201ENST00000416553 XAGE2Q96GT9 111 aa16.74■□□□□ 0.27
AP002856.2-201ENST00000416553 TEPSINQ96N21 525 aa16.74■□□□□ 0.27
AP002856.2-201ENST00000416553 C1orf115Q9H7X2 142 aa16.74■□□□□ 0.27
AP002856.2-201ENST00000416553 TRPA1O75762 1119 aa16.73■□□□□ 0.27
AP002856.2-201ENST00000416553 PRDX5P30044 214 aa16.73■□□□□ 0.27
AP002856.2-201ENST00000416553 CACNB3P54284 484 aa16.73■□□□□ 0.27
AP002856.2-201ENST00000416553 CDAN1Q8IWY9 1227 aa16.73■□□□□ 0.27
AP002856.2-201ENST00000416553 PANK1Q8TE04 598 aa16.73■□□□□ 0.27
AP002856.2-201ENST00000416553 SSH3Q8TE77 659 aa16.73■□□□□ 0.27
AP002856.2-201ENST00000416553 SLC10A4Q96EP9 437 aa16.73■□□□□ 0.27
AP002856.2-201ENST00000416553 TMEM39BQ9GZU3 492 aa16.73■□□□□ 0.27
AP002856.2-201ENST00000416553 SAGE1Q9NXZ1 904 aa16.73■□□□□ 0.27
AP002856.2-201ENST00000416553 SALL1Q9NSC2 1324 aa16.72■□□□□ 0.27
AP002856.2-201ENST00000416553 LDHBP07195 334 aaKnown RBP16.72■□□□□ 0.27
AP002856.2-201ENST00000416553 TM4SF4P48230 202 aa16.72■□□□□ 0.27
AP002856.2-201ENST00000416553 TNNI2P48788 182 aa16.72■□□□□ 0.27
AP002856.2-201ENST00000416553 MKRN3Q13064 507 aaKnown RBP16.72■□□□□ 0.27
AP002856.2-201ENST00000416553 RASGRF1Q13972 1273 aa16.72■□□□□ 0.27
AP002856.2-201ENST00000416553 DIXDC1Q155Q3 683 aa16.72■□□□□ 0.27
AP002856.2-201ENST00000416553 CLMNQ96JQ2 1002 aa16.72■□□□□ 0.27
AP002856.2-201ENST00000416553 NEUROD6Q96NK8 337 aa16.72■□□□□ 0.27
AP002856.2-201ENST00000416553 UNCXA6NJT0 531 aa16.71■□□□□ 0.27
AP002856.2-201ENST00000416553 CAPN15O75808 1086 aa16.71■□□□□ 0.27
AP002856.2-201ENST00000416553 IREB2P48200 963 aaKnown RBP16.71■□□□□ 0.27
AP002856.2-201ENST00000416553 MVPQ14764 893 aaKnown RBP16.71■□□□□ 0.27
AP002856.2-201ENST00000416553 FKBP1CQ5VVH2 108 aa16.71■□□□□ 0.27
AP002856.2-201ENST00000416553 SPRYD7Q5W111 196 aa16.71■□□□□ 0.27
AP002856.2-201ENST00000416553 DAGLAQ9Y4D2 1042 aa16.71■□□□□ 0.27
AP002856.2-201ENST00000416553 FAM83AQ86UY5 434 aa16.7■□□□□ 0.26
AP002856.2-201ENST00000416553 TMOD2Q9NZR1 351 aa16.7■□□□□ 0.26
AP002856.2-201ENST00000416553 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.7■□□□□ 0.26
AP002856.2-201ENST00000416553 PDS5AQ29RF7 1337 aaKnown RBP16.7■□□□□ 0.26
AP002856.2-201ENST00000416553 SURF6O75683 361 aaKnown RBP16.69■□□□□ 0.26
AP002856.2-201ENST00000416553 CDC42EP5Q6NZY7 148 aa16.69■□□□□ 0.26
AP002856.2-201ENST00000416553 ZGPATQ8N5A5 531 aaKnown RBP16.69■□□□□ 0.26
AP002856.2-201ENST00000416553 MS4A1P11836 297 aa16.68■□□□□ 0.26
AP002856.2-201ENST00000416553 GORABQ5T7V8 394 aa16.68■□□□□ 0.26
AP002856.2-201ENST00000416553 ANKRD13AQ8IZ07 590 aa16.68■□□□□ 0.26
AP002856.2-201ENST00000416553 WNK4Q96J92 1243 aa16.68■□□□□ 0.26
AP002856.2-201ENST00000416553 ABCF2Q9UG63 623 aa16.68■□□□□ 0.26
AP002856.2-201ENST00000416553 RCAN3Q9UKA8 241 aa16.68■□□□□ 0.26
AP002856.2-201ENST00000416553 NOP58Q9Y2X3 529 aaKnown RBP16.68■□□□□ 0.26
AP002856.2-201ENST00000416553 ZBTB48P10074 688 aaPredicted RBP16.67■□□□□ 0.26
AP002856.2-201ENST00000416553 SREBF2Q12772 1141 aa16.67■□□□□ 0.26
AP002856.2-201ENST00000416553 OS9Q13438 667 aaPredicted RBP16.67■□□□□ 0.26
AP002856.2-201ENST00000416553 CEP85Q6P2H3 762 aa16.67■□□□□ 0.26
AP002856.2-201ENST00000416553 GPR108Q9NPR9 543 aa16.67■□□□□ 0.26
AP002856.2-201ENST00000416553 USP40Q9NVE5 1235 aa16.67■□□□□ 0.26
AP002856.2-201ENST00000416553 HMG20BQ9P0W2 317 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms