RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 MRIQ9BWK5 157 aa21.94■■□□□ 1.1
PDLIM2-208ENST00000416159 ARAP2Q8WZ64 1704 aa21.94■■□□□ 1.1
PDLIM2-208ENST00000416159 IPO8O15397 1037 aaKnown RBP21.93■■□□□ 1.1
PDLIM2-208ENST00000416159 SREBF2Q12772 1141 aa21.93■■□□□ 1.1
PDLIM2-208ENST00000416159 NBPF12Q5TAG4 269 aaPredicted RBP21.93■■□□□ 1.1
PDLIM2-208ENST00000416159 CEP126Q9P2H0 1117 aa21.93■■□□□ 1.1
PDLIM2-208ENST00000416159 SUGT1Q9Y2Z0 365 aa21.93■■□□□ 1.1
PDLIM2-208ENST00000416159 IREB2P48200 963 aaKnown RBP21.92■■□□□ 1.1
PDLIM2-208ENST00000416159 MKRN3Q13064 507 aaKnown RBP21.92■■□□□ 1.1
PDLIM2-208ENST00000416159 GRIK5Q16478 980 aa21.92■■□□□ 1.1
PDLIM2-208ENST00000416159 SPRYD7Q5W111 196 aa21.92■■□□□ 1.1
PDLIM2-208ENST00000416159 MEIS3Q99687 375 aa21.92■■□□□ 1.1
PDLIM2-208ENST00000416159 SIL1Q9H173 461 aa21.92■■□□□ 1.1
PDLIM2-208ENST00000416159 FZD1Q9UP38 647 aa21.92■■□□□ 1.1
PDLIM2-208ENST00000416159 MAST3O60307 1309 aa21.91■■□□□ 1.1
PDLIM2-208ENST00000416159 CCDC85CA6NKD9 419 aa21.91■■□□□ 1.1
PDLIM2-208ENST00000416159 GNAI3P08754 354 aa21.91■■□□□ 1.1
PDLIM2-208ENST00000416159 TNNI2P48788 182 aa21.91■■□□□ 1.1
PDLIM2-208ENST00000416159 TEKT1Q969V4 418 aa21.91■■□□□ 1.1
PDLIM2-208ENST00000416159 SSC5DA1L4H1 1573 aa21.91■■□□□ 1.1
PDLIM2-208ENST00000416159 USP2O75604 605 aaPredicted RBP21.9■■□□□ 1.1
PDLIM2-208ENST00000416159 IL15P40933 162 aaPredicted RBP21.9■■□□□ 1.1
PDLIM2-208ENST00000416159 WDR66Q8TBY9 1149 aa21.9■■□□□ 1.1
PDLIM2-208ENST00000416159 COPRSQ9NQ92 184 aa21.9■■□□□ 1.1
PDLIM2-208ENST00000416159 TCP10L2B9ZVM9 353 aa21.89■■□□□ 1.09
PDLIM2-208ENST00000416159 INHBEP58166 350 aa21.89■■□□□ 1.09
PDLIM2-208ENST00000416159 ATP2B3Q16720 1220 aa21.89■■□□□ 1.09
PDLIM2-208ENST00000416159 GNL3LQ9NVN8 582 aaKnown RBP21.89■■□□□ 1.09
PDLIM2-208ENST00000416159 MANSC4A6NHS7 340 aaPredicted RBP21.88■■□□□ 1.09
PDLIM2-208ENST00000416159 ZBTB48P10074 688 aaPredicted RBP21.88■■□□□ 1.09
PDLIM2-208ENST00000416159 DIEXFQ68CQ4 756 aaKnown RBP21.88■■□□□ 1.09
PDLIM2-208ENST00000416159 ANKRD13AQ8IZ07 590 aa21.88■■□□□ 1.09
PDLIM2-208ENST00000416159 MIER1Q8N108 512 aa21.88■■□□□ 1.09
PDLIM2-208ENST00000416159 ZDHHC15Q96MV8 337 aa21.88■■□□□ 1.09
PDLIM2-208ENST00000416159 PA2G4Q9UQ80 394 aaKnown RBP21.88■■□□□ 1.09
PDLIM2-208ENST00000416159 BCAR3O75815 825 aa21.87■■□□□ 1.09
PDLIM2-208ENST00000416159 TBC1D8O95759 1140 aa21.87■■□□□ 1.09
PDLIM2-208ENST00000416159 HHIPL2Q6UWX4 724 aa21.87■■□□□ 1.09
PDLIM2-208ENST00000416159 ATF7IPQ6VMQ6 1270 aa21.87■■□□□ 1.09
PDLIM2-208ENST00000416159 WNK4Q96J92 1243 aa21.87■■□□□ 1.09
PDLIM2-208ENST00000416159 CLMNQ96JQ2 1002 aa21.87■■□□□ 1.09
PDLIM2-208ENST00000416159 TEPSINQ96N21 525 aa21.87■■□□□ 1.09
PDLIM2-208ENST00000416159 TMOD2Q9NZR1 351 aa21.87■■□□□ 1.09
PDLIM2-208ENST00000416159 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.87■■□□□ 1.09
PDLIM2-208ENST00000416159 ALDH1A1P00352 501 aa21.86■■□□□ 1.09
PDLIM2-208ENST00000416159 TRIM27P14373 513 aa21.86■■□□□ 1.09
PDLIM2-208ENST00000416159 NOM1Q5C9Z4 860 aaKnown RBP21.86■■□□□ 1.09
PDLIM2-208ENST00000416159 FRAT1Q92837 279 aaPredicted RBP21.86■■□□□ 1.09
PDLIM2-208ENST00000416159 CFHR5Q9BXR6 569 aa21.86■■□□□ 1.09
PDLIM2-208ENST00000416159 MYH13Q9UKX3 1938 aa21.85■■□□□ 1.09
PDLIM2-208ENST00000416159 HNRNPUQ00839 825 aaKnown RBP eCLIP21.85■■□□□ 1.09
PDLIM2-208ENST00000416159 MTX1Q13505 466 aa21.85■■□□□ 1.09
PDLIM2-208ENST00000416159 CTU1Q7Z7A3 348 aaKnown RBP21.85■■□□□ 1.09
PDLIM2-208ENST00000416159 TMEM39BQ9GZU3 492 aa21.85■■□□□ 1.09
PDLIM2-208ENST00000416159 SEMA3EO15041 775 aa21.84■■□□□ 1.09
PDLIM2-208ENST00000416159 SRGAP3O43295 1099 aa21.84■■□□□ 1.09
PDLIM2-208ENST00000416159 FKBP1CQ5VVH2 108 aa21.84■■□□□ 1.09
PDLIM2-208ENST00000416159 APOBEC3HQ6NTF7 200 aaKnown RBP21.84■■□□□ 1.09
PDLIM2-208ENST00000416159 DENND2AQ9ULE3 1009 aa21.84■■□□□ 1.09
PDLIM2-208ENST00000416159 GPR25O00155 361 aa21.83■■□□□ 1.09
PDLIM2-208ENST00000416159 ZBTB22O15209 634 aa21.83■■□□□ 1.09
PDLIM2-208ENST00000416159 FAM83AQ86UY5 434 aa21.83■■□□□ 1.09
PDLIM2-208ENST00000416159 ZNF296Q8WUU4 475 aaPredicted RBP21.83■■□□□ 1.09
PDLIM2-208ENST00000416159 GNAI2P04899 355 aa21.82■■□□□ 1.08
PDLIM2-208ENST00000416159 CACNB3P54284 484 aa21.82■■□□□ 1.08
PDLIM2-208ENST00000416159 MAP3K9P80192 1104 aa21.82■■□□□ 1.08
PDLIM2-208ENST00000416159 IFNL1Q8IU54 200 aa21.82■■□□□ 1.08
PDLIM2-208ENST00000416159 AKAP2Q9Y2D5 859 aa21.82■■□□□ 1.08
PDLIM2-208ENST00000416159 SALL1Q9NSC2 1324 aa21.81■■□□□ 1.08
PDLIM2-208ENST00000416159 PHKA1P46020 1223 aa21.81■■□□□ 1.08
PDLIM2-208ENST00000416159 ZKSCAN2Q63HK3 967 aa21.81■■□□□ 1.08
PDLIM2-208ENST00000416159 CDAN1Q8IWY9 1227 aa21.81■■□□□ 1.08
PDLIM2-208ENST00000416159 CLUAP1Q96AJ1 413 aa21.81■■□□□ 1.08
PDLIM2-208ENST00000416159 HOOK2Q96ED9 719 aa21.81■■□□□ 1.08
PDLIM2-208ENST00000416159 TNNQ9UQP3 1299 aa21.81■■□□□ 1.08
PDLIM2-208ENST00000416159 LDHBP07195 334 aaKnown RBP21.8■■□□□ 1.08
PDLIM2-208ENST00000416159 GJA5P36382 358 aa21.8■■□□□ 1.08
PDLIM2-208ENST00000416159 RGS19P49795 217 aa21.8■■□□□ 1.08
PDLIM2-208ENST00000416159 PKN2Q16513 984 aaKnown RBP21.8■■□□□ 1.08
PDLIM2-208ENST00000416159 CCDC102BQ68D86 513 aa21.8■■□□□ 1.08
PDLIM2-208ENST00000416159 OTUD7BQ6GQQ9 843 aa21.8■■□□□ 1.08
PDLIM2-208ENST00000416159 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.8■■□□□ 1.08
PDLIM2-208ENST00000416159 ELP3Q9H9T3 547 aa21.8■■□□□ 1.08
PDLIM2-208ENST00000416159 FKTNO75072 461 aa21.79■■□□□ 1.08
PDLIM2-208ENST00000416159 PRDX5P30044 214 aa21.79■■□□□ 1.08
PDLIM2-208ENST00000416159 ADORA1P30542 326 aa21.79■■□□□ 1.08
PDLIM2-208ENST00000416159 TIMM10P62072 90 aa21.79■■□□□ 1.08
PDLIM2-208ENST00000416159 ZGPATQ8N5A5 531 aaKnown RBP21.79■■□□□ 1.08
PDLIM2-208ENST00000416159 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.79■■□□□ 1.08
PDLIM2-208ENST00000416159 DAGLAQ9Y4D2 1042 aa21.79■■□□□ 1.08
PDLIM2-208ENST00000416159 CSADQ9Y600 493 aa21.79■■□□□ 1.08
PDLIM2-208ENST00000416159 TESPA1A2RU30 521 aaPredicted RBP21.78■■□□□ 1.08
PDLIM2-208ENST00000416159 TFCP2Q12800 502 aa21.78■■□□□ 1.08
PDLIM2-208ENST00000416159 OPTNQ96CV9 577 aa21.78■■□□□ 1.08
PDLIM2-208ENST00000416159 R3HDMLQ9H3Y0 253 aa21.78■■□□□ 1.08
PDLIM2-208ENST00000416159 LAMB1P07942 1786 aa21.77■■□□□ 1.08
PDLIM2-208ENST00000416159 A0A1B0GUL7 405 aa21.77■■□□□ 1.08
PDLIM2-208ENST00000416159 IGF2BP3O00425 579 aaKnown RBP eCLIP21.77■■□□□ 1.08
PDLIM2-208ENST00000416159 DIXDC1Q155Q3 683 aa21.77■■□□□ 1.08
PDLIM2-208ENST00000416159 TMEM57Q8N5G2 664 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms