RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 TSNAXIP1Q2TAA8 658 aa8.79□□□□□ -1
EPHA4-204ENST00000415749 NAALADL2Q58DX5 795 aa8.79□□□□□ -1
EPHA4-204ENST00000415749 GOLGA6L1Q8N7Z2 621 aa8.79□□□□□ -1
EPHA4-204ENST00000415749 C1orf127Q8N9H9 656 aa8.79□□□□□ -1
EPHA4-204ENST00000415749 FBF1Q8TES7 1133 aa8.79□□□□□ -1
EPHA4-204ENST00000415749 UBE2OQ9C0C9 1292 aaKnown RBP8.79□□□□□ -1
EPHA4-204ENST00000415749 CNTN3Q9P232 1028 aa8.79□□□□□ -1
EPHA4-204ENST00000415749 GDF2Q9UK05 429 aaPredicted RBP8.79□□□□□ -1
EPHA4-204ENST00000415749 ERVK-7P63135 1459 aa8.78□□□□□ -1
EPHA4-204ENST00000415749 SMARCA5O60264 1052 aaPredicted RBP8.78□□□□□ -1
EPHA4-204ENST00000415749 WFS1O76024 890 aa8.78□□□□□ -1
EPHA4-204ENST00000415749 HOXD8P13378 290 aaPredicted RBP8.78□□□□□ -1
EPHA4-204ENST00000415749 ITGAEP38570 1179 aa8.78□□□□□ -1
EPHA4-204ENST00000415749 PCBP4P57723 403 aaKnown RBP8.78□□□□□ -1
EPHA4-204ENST00000415749 HYAL2Q12891 473 aa8.78□□□□□ -1
EPHA4-204ENST00000415749 RNFT1Q5M7Z0 435 aa8.78□□□□□ -1
EPHA4-204ENST00000415749 CHRDQ9H2X0 955 aa8.78□□□□□ -1
EPHA4-204ENST00000415749 LRRC9Q6ZRR7 1453 aa8.77□□□□□ -1
EPHA4-204ENST00000415749 TMEM2Q9UHN6 1383 aa8.77□□□□□ -1.01
EPHA4-204ENST00000415749 SLIT1O75093 1534 aa8.77□□□□□ -1.01
EPHA4-204ENST00000415749 PRPF40AO75400 957 aaKnown RBP8.77□□□□□ -1.01
EPHA4-204ENST00000415749 EDN3P14138 238 aa8.77□□□□□ -1.01
EPHA4-204ENST00000415749 GPLD1P80108 840 aa8.77□□□□□ -1.01
EPHA4-204ENST00000415749 TBC1D8BQ0IIM8 1120 aa8.77□□□□□ -1.01
EPHA4-204ENST00000415749 TRPM4Q8TD43 1214 aa8.77□□□□□ -1.01
EPHA4-204ENST00000415749 UBXN4Q92575 508 aa8.77□□□□□ -1.01
EPHA4-204ENST00000415749 TNFRSF25Q93038 417 aa8.77□□□□□ -1.01
EPHA4-204ENST00000415749 SPACA7Q96KW9 195 aa8.77□□□□□ -1.01
EPHA4-204ENST00000415749 CNTNAP3BQ96NU0 1288 aa8.77□□□□□ -1.01
EPHA4-204ENST00000415749 OXCT2Q9BYC2 517 aaPredicted RBP8.77□□□□□ -1.01
EPHA4-204ENST00000415749 CNTNAP3Q9BZ76 1288 aa8.77□□□□□ -1.01
EPHA4-204ENST00000415749 IGFLR1Q9H665 355 aa8.77□□□□□ -1.01
EPHA4-204ENST00000415749 CCDC141Q6ZP82 1450 aa8.77□□□□□ -1.01
EPHA4-204ENST00000415749 EREGO14944 169 aa8.76□□□□□ -1.01
EPHA4-204ENST00000415749 PPM1GO15355 546 aaPredicted RBP8.76□□□□□ -1.01
EPHA4-204ENST00000415749 CANXP27824 592 aaKnown RBP8.76□□□□□ -1.01
EPHA4-204ENST00000415749 NCAPG2Q86XI2 1143 aa8.76□□□□□ -1.01
EPHA4-204ENST00000415749 RBSNQ9H1K0 784 aa8.76□□□□□ -1.01
EPHA4-204ENST00000415749 DNAJB12Q9NXW2 375 aaKnown RBP8.76□□□□□ -1.01
EPHA4-204ENST00000415749 PHLPP1O60346 1717 aa8.76□□□□□ -1.01
EPHA4-204ENST00000415749 UBR1Q8IWV7 1749 aa8.76□□□□□ -1.01
EPHA4-204ENST00000415749 ABCC3O15438 1527 aa8.75□□□□□ -1.01
EPHA4-204ENST00000415749 FGD6Q6ZV73 1430 aa8.75□□□□□ -1.01
EPHA4-204ENST00000415749 NEURL1BA8MQ27 555 aa8.75□□□□□ -1.01
EPHA4-204ENST00000415749 ADARB2-AS1A8MUL3 147 aa8.75□□□□□ -1.01
EPHA4-204ENST00000415749 ADAMTS2O95450 1211 aa8.75□□□□□ -1.01
EPHA4-204ENST00000415749 RBM6P78332 1123 aaKnown RBP8.75□□□□□ -1.01
EPHA4-204ENST00000415749 IDI1Q13907 227 aa8.75□□□□□ -1.01
EPHA4-204ENST00000415749 SF3A1Q15459 793 aaKnown RBP8.75□□□□□ -1.01
EPHA4-204ENST00000415749 SLCO4C1Q6ZQN7 724 aa8.75□□□□□ -1.01
EPHA4-204ENST00000415749 GALNT12Q8IXK2 581 aa8.75□□□□□ -1.01
EPHA4-204ENST00000415749 CCDC74AQ96AQ1 378 aa8.75□□□□□ -1.01
EPHA4-204ENST00000415749 ZNF775Q96BV0 537 aaPredicted RBP8.75□□□□□ -1.01
EPHA4-204ENST00000415749 SPATA32Q96LK8 384 aa8.75□□□□□ -1.01
EPHA4-204ENST00000415749 FRMD6Q96NE9 622 aa8.75□□□□□ -1.01
EPHA4-204ENST00000415749 NLRP2Q9NX02 1062 aa8.75□□□□□ -1.01
EPHA4-204ENST00000415749 KANSL3Q9P2N6 904 aa8.75□□□□□ -1.01
EPHA4-204ENST00000415749 GGA1Q9UJY5 639 aa8.75□□□□□ -1.01
EPHA4-204ENST00000415749 LRP6O75581 1613 aa8.75□□□□□ -1.01
EPHA4-204ENST00000415749 AFF2P51816 1311 aa8.75□□□□□ -1.01
EPHA4-204ENST00000415749 KIF4AO95239 1232 aa8.74□□□□□ -1.01
EPHA4-204ENST00000415749 GHRHP01286 108 aa8.74□□□□□ -1.01
EPHA4-204ENST00000415749 CYP2E1P05181 493 aaPredicted RBP8.74□□□□□ -1.01
EPHA4-204ENST00000415749 ALAS2P22557 587 aa8.74□□□□□ -1.01
EPHA4-204ENST00000415749 ERCC5P28715 1186 aaPredicted RBP8.74□□□□□ -1.01
EPHA4-204ENST00000415749 KRT76Q01546 638 aa8.74□□□□□ -1.01
EPHA4-204ENST00000415749 XPCQ01831 940 aaPredicted RBP8.74□□□□□ -1.01
EPHA4-204ENST00000415749 NSUN5Q96P11 429 aaKnown RBP8.74□□□□□ -1.01
EPHA4-204ENST00000415749 SALL4Q9UJQ4 1053 aa8.74□□□□□ -1.01
EPHA4-204ENST00000415749 CDK12Q9NYV4 1490 aaPredicted RBP8.74□□□□□ -1.01
EPHA4-204ENST00000415749 PRDM15P57071 1507 aaPredicted RBP8.74□□□□□ -1.01
EPHA4-204ENST00000415749 MAP3K1Q13233 1512 aa8.74□□□□□ -1.01
EPHA4-204ENST00000415749 ELOA3CA0A087WX78 387 aaPredicted RBP8.73□□□□□ -1.01
EPHA4-204ENST00000415749 LOC102724428A0A0B4J2F2 783 aa8.73□□□□□ -1.01
EPHA4-204ENST00000415749 ELOA3DA6NLF2 546 aaPredicted RBP8.73□□□□□ -1.01
EPHA4-204ENST00000415749 GMPRP36959 345 aa8.73□□□□□ -1.01
EPHA4-204ENST00000415749 ADH7P40394 386 aa8.73□□□□□ -1.01
EPHA4-204ENST00000415749 SIK1P57059 783 aa8.73□□□□□ -1.01
EPHA4-204ENST00000415749 ELOA3BQ3SY89 546 aa8.73□□□□□ -1.01
EPHA4-204ENST00000415749 USPL1Q5W0Q7 1092 aa8.73□□□□□ -1.01
EPHA4-204ENST00000415749 TREML4Q6UXN2 200 aa8.73□□□□□ -1.01
EPHA4-204ENST00000415749 ELOA3Q8NG57 546 aa8.73□□□□□ -1.01
EPHA4-204ENST00000415749 SLC6A14Q9UN76 642 aa8.73□□□□□ -1.01
EPHA4-204ENST00000415749 SPG7Q9UQ90 795 aa8.73□□□□□ -1.01
EPHA4-204ENST00000415749 TIAM1Q13009 1591 aa8.73□□□□□ -1.01
EPHA4-204ENST00000415749 POLR3DP05423 398 aaPredicted RBP8.72□□□□□ -1.01
EPHA4-204ENST00000415749 ATF3P18847 181 aa8.72□□□□□ -1.01
EPHA4-204ENST00000415749 FCHSD1Q86WN1 690 aa8.72□□□□□ -1.01
EPHA4-204ENST00000415749 BACH2Q9BYV9 841 aa8.72□□□□□ -1.01
EPHA4-204ENST00000415749 C19orf44Q9H6X5 657 aa8.72□□□□□ -1.01
EPHA4-204ENST00000415749 NPHS2Q9NP85 383 aa8.72□□□□□ -1.01
EPHA4-204ENST00000415749 KLF15Q9UIH9 416 aa8.72□□□□□ -1.01
EPHA4-204ENST00000415749 WWC3Q9ULE0 1092 aa8.72□□□□□ -1.01
EPHA4-204ENST00000415749 SRCAPQ6ZRS2 3230 aa8.72□□□□□ -1.01
EPHA4-204ENST00000415749 CEP162Q5TB80 1403 aa8.71□□□□□ -1.01
EPHA4-204ENST00000415749 GIPC1O14908 333 aa8.71□□□□□ -1.02
EPHA4-204ENST00000415749 GADD45BO75293 160 aaPredicted RBP8.71□□□□□ -1.02
EPHA4-204ENST00000415749 SLURP2P0DP57 97 aa8.71□□□□□ -1.02
EPHA4-204ENST00000415749 EIF2AK2P19525 551 aaKnown RBP8.71□□□□□ -1.02
EPHA4-204ENST00000415749 MLLT1Q03111 559 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms