RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 TDRD3Q9H7E2 651 aaKnown RBP31.09■■■□□ 2.57
HLA-C-204ENST00000415537 RNF186Q9NXI6 227 aa31.09■■■□□ 2.57
HLA-C-204ENST00000415537 ZNF70Q9UC06 446 aaPredicted RBP31.09■■■□□ 2.57
HLA-C-204ENST00000415537 AOX1Q06278 1338 aa31.08■■■□□ 2.57
HLA-C-204ENST00000415537 ATP2B3Q16720 1220 aa31.08■■■□□ 2.57
HLA-C-204ENST00000415537 SPDYE2Q495Y8 402 aa31.08■■■□□ 2.57
HLA-C-204ENST00000415537 PA2G4Q9UQ80 394 aaKnown RBP31.08■■■□□ 2.57
HLA-C-204ENST00000415537 HDLBPQ00341 1268 aaKnown RBP31.07■■■□□ 2.56
HLA-C-204ENST00000415537 RASA3Q14644 834 aa31.07■■■□□ 2.56
HLA-C-204ENST00000415537 GRIK5Q16478 980 aa31.07■■■□□ 2.56
HLA-C-204ENST00000415537 CLUAP1Q96AJ1 413 aa31.07■■■□□ 2.56
HLA-C-204ENST00000415537 COPRSQ9NQ92 184 aa31.07■■■□□ 2.56
HLA-C-204ENST00000415537 MAST3O60307 1309 aa31.06■■■□□ 2.56
HLA-C-204ENST00000415537 TEKT1Q969V4 418 aa31.06■■■□□ 2.56
HLA-C-204ENST00000415537 FZD1Q9UP38 647 aa31.06■■■□□ 2.56
HLA-C-204ENST00000415537 SUGT1Q9Y2Z0 365 aa31.06■■■□□ 2.56
HLA-C-204ENST00000415537 SRGAP3O43295 1099 aa31.05■■■□□ 2.56
HLA-C-204ENST00000415537 LDLRAD1Q5T700 205 aa31.05■■■□□ 2.56
HLA-C-204ENST00000415537 WDR66Q8TBY9 1149 aa31.05■■■□□ 2.56
HLA-C-204ENST00000415537 GNL3LQ9NVN8 582 aaKnown RBP31.05■■■□□ 2.56
HLA-C-204ENST00000415537 TNNI2P48788 182 aa31.04■■■□□ 2.56
HLA-C-204ENST00000415537 MKRN3Q13064 507 aaKnown RBP31.04■■■□□ 2.56
HLA-C-204ENST00000415537 NBPF12Q5TAG4 269 aaPredicted RBP31.04■■■□□ 2.56
HLA-C-204ENST00000415537 ZKSCAN2Q63HK3 967 aa31.04■■■□□ 2.56
HLA-C-204ENST00000415537 TNNQ9UQP3 1299 aa31.04■■■□□ 2.56
HLA-C-204ENST00000415537 MAP3K11Q16584 847 aa31.03■■■□□ 2.56
HLA-C-204ENST00000415537 SLC10A4Q96EP9 437 aa31.03■■■□□ 2.56
HLA-C-204ENST00000415537 MRIQ9BWK5 157 aa31.03■■■□□ 2.56
HLA-C-204ENST00000415537 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.03■■■□□ 2.56
HLA-C-204ENST00000415537 TCP10L2B9ZVM9 353 aa31.02■■■□□ 2.56
HLA-C-204ENST00000415537 GNAI2P04899 355 aa31.02■■■□□ 2.56
HLA-C-204ENST00000415537 ABHD8Q96I13 439 aa31.02■■■□□ 2.56
HLA-C-204ENST00000415537 SSC5DA1L4H1 1573 aa31.01■■■□□ 2.56
HLA-C-204ENST00000415537 IREB2P48200 963 aaKnown RBP31.01■■■□□ 2.55
HLA-C-204ENST00000415537 SREBF2Q12772 1141 aa31■■■□□ 2.55
HLA-C-204ENST00000415537 MTX1Q13505 466 aa31■■■□□ 2.55
HLA-C-204ENST00000415537 ZDHHC15Q96MV8 337 aa31■■■□□ 2.55
HLA-C-204ENST00000415537 TMOD2Q9NZR1 351 aa31■■■□□ 2.55
HLA-C-204ENST00000415537 UNCXA6NJT0 531 aa30.99■■■□□ 2.55
HLA-C-204ENST00000415537 TM4SF4P48230 202 aa30.99■■■□□ 2.55
HLA-C-204ENST00000415537 SPRYD7Q5W111 196 aa30.98■■■□□ 2.55
HLA-C-204ENST00000415537 TMEM57Q8N5G2 664 aa30.98■■■□□ 2.55
HLA-C-204ENST00000415537 HHIPL2Q6UWX4 724 aa30.97■■■□□ 2.55
HLA-C-204ENST00000415537 DENND2AQ9ULE3 1009 aa30.97■■■□□ 2.55
HLA-C-204ENST00000415537 AKAP2Q9Y2D5 859 aa30.97■■■□□ 2.55
HLA-C-204ENST00000415537 ZBED9Q6R2W3 1325 aa30.97■■■□□ 2.55
HLA-C-204ENST00000415537 SEMA3EO15041 775 aa30.96■■■□□ 2.55
HLA-C-204ENST00000415537 USP2O75604 605 aaPredicted RBP30.96■■■□□ 2.55
HLA-C-204ENST00000415537 DGKZQ13574 1117 aa30.96■■■□□ 2.55
HLA-C-204ENST00000415537 FTSJ3Q8IY81 847 aaKnown RBP30.96■■■□□ 2.55
HLA-C-204ENST00000415537 MCOLN1Q9GZU1 580 aa30.96■■■□□ 2.55
HLA-C-204ENST00000415537 TMEM39BQ9GZU3 492 aa30.96■■■□□ 2.55
HLA-C-204ENST00000415537 PHKA1P46020 1223 aa30.95■■■□□ 2.55
HLA-C-204ENST00000415537 TIMM10P62072 90 aa30.95■■■□□ 2.55
HLA-C-204ENST00000415537 ANKRD13AQ8IZ07 590 aa30.95■■■□□ 2.55
HLA-C-204ENST00000415537 CLMNQ96JQ2 1002 aa30.95■■■□□ 2.55
HLA-C-204ENST00000415537 TEPSINQ96N21 525 aa30.95■■■□□ 2.55
HLA-C-204ENST00000415537 ZBTB48P10074 688 aaPredicted RBP30.94■■■□□ 2.54
HLA-C-204ENST00000415537 CACNB3P54284 484 aa30.94■■■□□ 2.54
HLA-C-204ENST00000415537 TFCP2Q12800 502 aa30.94■■■□□ 2.54
HLA-C-204ENST00000415537 CCDC102BQ68D86 513 aa30.94■■■□□ 2.54
HLA-C-204ENST00000415537 APOBEC3HQ6NTF7 200 aaKnown RBP30.94■■■□□ 2.54
HLA-C-204ENST00000415537 LDHBP07195 334 aaKnown RBP30.93■■■□□ 2.54
HLA-C-204ENST00000415537 ADORA1P30542 326 aa30.93■■■□□ 2.54
HLA-C-204ENST00000415537 WNK4Q96J92 1243 aa30.93■■■□□ 2.54
HLA-C-204ENST00000415537 A0A1B0GUL7 405 aa30.92■■■□□ 2.54
HLA-C-204ENST00000415537 MANSC4A6NHS7 340 aaPredicted RBP30.92■■■□□ 2.54
HLA-C-204ENST00000415537 TBC1D8O95759 1140 aa30.92■■■□□ 2.54
HLA-C-204ENST00000415537 INHBEP58166 350 aa30.92■■■□□ 2.54
HLA-C-204ENST00000415537 PRDX5P30044 214 aa30.91■■■□□ 2.54
HLA-C-204ENST00000415537 G3BP1Q13283 466 aaKnown RBP eCLIP30.91■■■□□ 2.54
HLA-C-204ENST00000415537 CDAN1Q8IWY9 1227 aa30.91■■■□□ 2.54
HLA-C-204ENST00000415537 ZGPATQ8N5A5 531 aaKnown RBP30.91■■■□□ 2.54
HLA-C-204ENST00000415537 SALL1Q9NSC2 1324 aa30.91■■■□□ 2.54
HLA-C-204ENST00000415537 PNMA6EA0A0J9YXQ4 647 aa30.9■■■□□ 2.54
HLA-C-204ENST00000415537 CCDC85CA6NKD9 419 aa30.9■■■□□ 2.54
HLA-C-204ENST00000415537 FKBP1CQ5VVH2 108 aa30.9■■■□□ 2.54
HLA-C-204ENST00000415537 FAM83AQ86UY5 434 aa30.9■■■□□ 2.54
HLA-C-204ENST00000415537 XAGE2Q96GT9 111 aa30.9■■■□□ 2.54
HLA-C-204ENST00000415537 NEUROD6Q96NK8 337 aa30.9■■■□□ 2.54
HLA-C-204ENST00000415537 OTOFQ9HC10 1997 aa30.89■■■□□ 2.54
HLA-C-204ENST00000415537 MVPQ14764 893 aaKnown RBP30.89■■■□□ 2.54
HLA-C-204ENST00000415537 ITPRIPQ8IWB1 547 aa30.89■■■□□ 2.54
HLA-C-204ENST00000415537 HOOK2Q96ED9 719 aa30.89■■■□□ 2.54
HLA-C-204ENST00000415537 ZBTB22O15209 634 aa30.88■■■□□ 2.53
HLA-C-204ENST00000415537 ALDH1A1P00352 501 aa30.88■■■□□ 2.53
HLA-C-204ENST00000415537 DIXDC1Q155Q3 683 aa30.88■■■□□ 2.53
HLA-C-204ENST00000415537 DAGLAQ9Y4D2 1042 aa30.88■■■□□ 2.53
HLA-C-204ENST00000415537 ELP3Q9H9T3 547 aa30.87■■■□□ 2.53
HLA-C-204ENST00000415537 AK9Q5TCS8 1911 aa30.86■■■□□ 2.53
HLA-C-204ENST00000415537 GORABQ5T7V8 394 aa30.86■■■□□ 2.53
HLA-C-204ENST00000415537 CSADQ9Y600 493 aa30.86■■■□□ 2.53
HLA-C-204ENST00000415537 LAMB1P07942 1786 aa30.86■■■□□ 2.53
HLA-C-204ENST00000415537 MYH2Q9UKX2 1941 aa30.86■■■□□ 2.53
HLA-C-204ENST00000415537 MAP3K9P80192 1104 aa30.85■■■□□ 2.53
HLA-C-204ENST00000415537 RASGRF1Q13972 1273 aa30.85■■■□□ 2.53
HLA-C-204ENST00000415537 IFNL1Q8IU54 200 aa30.85■■■□□ 2.53
HLA-C-204ENST00000415537 ABCF2Q9UG63 623 aa30.85■■■□□ 2.53
HLA-C-204ENST00000415537 PDS5AQ29RF7 1337 aaKnown RBP30.84■■■□□ 2.53
HLA-C-204ENST00000415537 CDC42EP5Q6NZY7 148 aa30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms