RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 MCM10Q7L590 875 aa8.06□□□□□ -1.12
LMBR1-204ENST00000415428 FAM43AQ8N2R8 423 aa8.06□□□□□ -1.12
LMBR1-204ENST00000415428 PROCA1Q8NCQ7 364 aaPredicted RBP8.06□□□□□ -1.12
LMBR1-204ENST00000415428 XAGE3Q8WTP9 111 aa8.06□□□□□ -1.12
LMBR1-204ENST00000415428 CFAP44Q96MT7 982 aa8.06□□□□□ -1.12
LMBR1-204ENST00000415428 SEZ6LQ9BYH1 1024 aa8.06□□□□□ -1.12
LMBR1-204ENST00000415428 IFT57Q9NWB7 429 aa8.06□□□□□ -1.12
LMBR1-204ENST00000415428 TRIM35Q9UPQ4 493 aa8.06□□□□□ -1.12
LMBR1-204ENST00000415428 RIPOR2Q9Y4F9 1068 aa8.06□□□□□ -1.12
LMBR1-204ENST00000415428 BTBD19C9JJ37 291 aa8.06□□□□□ -1.12
LMBR1-204ENST00000415428 TNFRSF10AO00220 468 aa8.06□□□□□ -1.12
LMBR1-204ENST00000415428 CNKSR2Q8WXI2 1034 aa8.06□□□□□ -1.12
LMBR1-204ENST00000415428 CD209Q9NNX6 404 aa8.06□□□□□ -1.12
LMBR1-204ENST00000415428 MYH2Q9UKX2 1941 aa8.06□□□□□ -1.12
LMBR1-204ENST00000415428 PTPRSQ13332 1948 aa8.06□□□□□ -1.12
LMBR1-204ENST00000415428 UFL1O94874 794 aa8.06□□□□□ -1.12
LMBR1-204ENST00000415428 HOXC6P09630 235 aa8.06□□□□□ -1.12
LMBR1-204ENST00000415428 U2AF1L4Q8WU68 220 aaKnown RBP8.06□□□□□ -1.12
LMBR1-204ENST00000415428 IDI2Q9BXS1 227 aa8.06□□□□□ -1.12
LMBR1-204ENST00000415428 TRMT112Q9UI30 125 aaKnown RBP8.06□□□□□ -1.12
LMBR1-204ENST00000415428 FBXO3Q9UK99 471 aa8.06□□□□□ -1.12
LMBR1-204ENST00000415428 ATG2AQ2TAZ0 1938 aa8.06□□□□□ -1.12
LMBR1-204ENST00000415428 FCGRTP55899 365 aa8.05□□□□□ -1.12
LMBR1-204ENST00000415428 FBXO33Q7Z6M2 555 aa8.05□□□□□ -1.12
LMBR1-204ENST00000415428 ZNF70Q9UC06 446 aaPredicted RBP8.05□□□□□ -1.12
LMBR1-204ENST00000415428 MAST3O60307 1309 aa8.05□□□□□ -1.12
LMBR1-204ENST00000415428 KIF22Q14807 665 aa8.05□□□□□ -1.12
LMBR1-204ENST00000415428 DLK2Q6UY11 383 aa8.05□□□□□ -1.12
LMBR1-204ENST00000415428 PAXIP1Q6ZW49 1069 aaPredicted RBP8.05□□□□□ -1.12
LMBR1-204ENST00000415428 PARK7Q99497 189 aaKnown RBP8.05□□□□□ -1.12
LMBR1-204ENST00000415428 GAKO14976 1311 aa8.05□□□□□ -1.12
LMBR1-204ENST00000415428 SASH1O94885 1247 aa8.05□□□□□ -1.12
LMBR1-204ENST00000415428 SIP14410 1827 aa8.05□□□□□ -1.12
LMBR1-204ENST00000415428 VGLL4Q14135 290 aa8.05□□□□□ -1.12
LMBR1-204ENST00000415428 FAM110CQ1W6H9 321 aa8.05□□□□□ -1.12
LMBR1-204ENST00000415428 PDE4DIPQ5VU43 2346 aa8.05□□□□□ -1.12
LMBR1-204ENST00000415428 ANKRD18AQ8IVF6 992 aa8.05□□□□□ -1.12
LMBR1-204ENST00000415428 VGLL2Q8N8G2 317 aa8.05□□□□□ -1.12
LMBR1-204ENST00000415428 UBE4AQ14139 1066 aa8.04□□□□□ -1.12
LMBR1-204ENST00000415428 HOXA7P31268 230 aaPredicted RBP8.04□□□□□ -1.12
LMBR1-204ENST00000415428 COL19A1Q14993 1142 aa8.04□□□□□ -1.12
LMBR1-204ENST00000415428 AFG3L2Q9Y4W6 797 aa8.04□□□□□ -1.12
LMBR1-204ENST00000415428 PFASO15067 1338 aa8.04□□□□□ -1.12
LMBR1-204ENST00000415428 MYBBP1AQ9BQG0 1328 aaKnown RBP8.04□□□□□ -1.12
LMBR1-204ENST00000415428 RABL6Q3YEC7 729 aaPredicted RBP8.04□□□□□ -1.12
LMBR1-204ENST00000415428 TJAP1Q5JTD0 557 aa8.04□□□□□ -1.12
LMBR1-204ENST00000415428 MORN1Q5T089 497 aa8.04□□□□□ -1.12
LMBR1-204ENST00000415428 MOB2Q70IA6 237 aa8.04□□□□□ -1.12
LMBR1-204ENST00000415428 OGFOD1Q8N543 542 aa8.03□□□□□ -1.12
LMBR1-204ENST00000415428 TBC1D22AQ8WUA7 517 aa8.03□□□□□ -1.12
LMBR1-204ENST00000415428 CLMNQ96JQ2 1002 aa8.03□□□□□ -1.12
LMBR1-204ENST00000415428 ZBTB3Q9H5J0 574 aa8.03□□□□□ -1.12
LMBR1-204ENST00000415428 CWC25Q9NXE8 425 aaPredicted RBP8.03□□□□□ -1.12
LMBR1-204ENST00000415428 GPR37L1O60883 481 aa8.03□□□□□ -1.12
LMBR1-204ENST00000415428 GCLCP48506 637 aaPredicted RBP8.03□□□□□ -1.12
LMBR1-204ENST00000415428 NECAB2Q7Z6G3 386 aa8.03□□□□□ -1.12
LMBR1-204ENST00000415428 C12orf42Q96LP6 360 aa8.03□□□□□ -1.12
LMBR1-204ENST00000415428 C11orf49Q9H6J7 331 aa8.03□□□□□ -1.12
LMBR1-204ENST00000415428 PLXNA3P51805 1871 aa8.03□□□□□ -1.12
LMBR1-204ENST00000415428 HCLS1P14317 486 aaPredicted RBP8.02□□□□□ -1.12
LMBR1-204ENST00000415428 GTF2E1P29083 439 aaPredicted RBP8.02□□□□□ -1.12
LMBR1-204ENST00000415428 LHX8Q68G74 356 aa8.02□□□□□ -1.12
LMBR1-204ENST00000415428 FASTKD5Q7L8L6 764 aaKnown RBP8.02□□□□□ -1.12
LMBR1-204ENST00000415428 ZNF341Q9BYN7 854 aa8.02□□□□□ -1.12
LMBR1-204ENST00000415428 ANGEL1Q9UNK9 670 aaKnown RBP8.02□□□□□ -1.12
LMBR1-204ENST00000415428 ENTPD3O75355 529 aa8.02□□□□□ -1.13
LMBR1-204ENST00000415428 HMGCRP04035 888 aa8.02□□□□□ -1.13
LMBR1-204ENST00000415428 IGKV5-2P06315 115 aa8.02□□□□□ -1.13
LMBR1-204ENST00000415428 TNNI2P48788 182 aa8.02□□□□□ -1.13
LMBR1-204ENST00000415428 FOXO4P98177 505 aa8.02□□□□□ -1.13
LMBR1-204ENST00000415428 FAM151AQ8WW52 585 aa8.02□□□□□ -1.13
LMBR1-204ENST00000415428 CCL15-CCL14A0A0B4J2E2 113 aa8.02□□□□□ -1.13
LMBR1-204ENST00000415428 FGFR2P21802 821 aa8.02□□□□□ -1.13
LMBR1-204ENST00000415428 NUBP1P53384 320 aa8.02□□□□□ -1.13
LMBR1-204ENST00000415428 CCL15Q16663 113 aa8.02□□□□□ -1.13
LMBR1-204ENST00000415428 SEMA3EO15041 775 aa8.01□□□□□ -1.13
LMBR1-204ENST00000415428 TMPOP42166 694 aaKnown RBP8.01□□□□□ -1.13
LMBR1-204ENST00000415428 DCAF15Q66K64 600 aa8.01□□□□□ -1.13
LMBR1-204ENST00000415428 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.01□□□□□ -1.133e-6■■■■□ 19.8
LMBR1-204ENST00000415428 KIAA0355O15063 1070 aa8.01□□□□□ -1.13
LMBR1-204ENST00000415428 OLFML2BQ68BL8 750 aa8.01□□□□□ -1.13
LMBR1-204ENST00000415428 SOCS4Q8WXH5 440 aa8.01□□□□□ -1.13
LMBR1-204ENST00000415428 WDR18Q9BV38 432 aa8.01□□□□□ -1.13
LMBR1-204ENST00000415428 CXXC1Q9P0U4 656 aaPredicted RBP8.01□□□□□ -1.13
LMBR1-204ENST00000415428 NSFL1CQ9UNZ2 370 aaKnown RBP8.01□□□□□ -1.13
LMBR1-204ENST00000415428 WDHD1O75717 1129 aaPredicted RBP8.01□□□□□ -1.13
LMBR1-204ENST00000415428 BCAMP50895 628 aa8.01□□□□□ -1.13
LMBR1-204ENST00000415428 DLGAP5Q15398 846 aa8.01□□□□□ -1.13
LMBR1-204ENST00000415428 DOK7Q18PE1 504 aa8.01□□□□□ -1.13
LMBR1-204ENST00000415428 CFAP100Q494V2 611 aa8.01□□□□□ -1.13
LMBR1-204ENST00000415428 KSR2Q6VAB6 950 aa8.01□□□□□ -1.13
LMBR1-204ENST00000415428 GPTP24298 496 aa8□□□□□ -1.13
LMBR1-204ENST00000415428 OSBPL5Q9H0X9 879 aaPredicted RBP8□□□□□ -1.13
LMBR1-204ENST00000415428 ZNF408Q9H9D4 720 aa8□□□□□ -1.13
LMBR1-204ENST00000415428 AGTPBP1Q9UPW5 1226 aa8□□□□□ -1.13
LMBR1-204ENST00000415428 NEURL1BA8MQ27 555 aa8□□□□□ -1.13
LMBR1-204ENST00000415428 MAGEA10P43363 369 aaPredicted RBP8□□□□□ -1.13
LMBR1-204ENST00000415428 TAF1CQ15572 869 aaPredicted RBP8□□□□□ -1.13
LMBR1-204ENST00000415428 NBPF12Q5TAG4 269 aaPredicted RBP8□□□□□ -1.13
LMBR1-204ENST00000415428 DEFB123Q8N688 67 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms