RNA–Protein interactions for RNA: ENST00000415332.1

SYNGR1-206, Transcript of synaptogyrin 1, humanhuman

TSL 3

Gene SYNGR1, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-206ENST00000415332 CCL15Q16663 113 aa20.28■□□□□ 0.84
SYNGR1-206ENST00000415332 CCDC27Q2M243 656 aa20.28■□□□□ 0.84
SYNGR1-206ENST00000415332 MFSD14BQ5SR56 506 aa20.28■□□□□ 0.84
SYNGR1-206ENST00000415332 TDRD7Q8NHU6 1098 aaKnown RBP20.28■□□□□ 0.84
SYNGR1-206ENST00000415332 TRIOBPQ9H2D6 2365 aa20.27■□□□□ 0.84
SYNGR1-206ENST00000415332 GYG1P46976 350 aa20.27■□□□□ 0.84
SYNGR1-206ENST00000415332 TNFAIP1Q13829 316 aa20.27■□□□□ 0.84
SYNGR1-206ENST00000415332 SLC9C1Q4G0N8 1177 aa20.27■□□□□ 0.84
SYNGR1-206ENST00000415332 BEND3Q5T5X7 828 aa20.27■□□□□ 0.84
SYNGR1-206ENST00000415332 LDHAL6AQ6ZMR3 332 aa20.27■□□□□ 0.84
SYNGR1-206ENST00000415332 DZIP1LQ8IYY4 767 aaKnown RBP20.27■□□□□ 0.84
SYNGR1-206ENST00000415332 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.27■□□□□ 0.84
SYNGR1-206ENST00000415332 ARHGAP39Q9C0H5 1083 aa20.27■□□□□ 0.84
SYNGR1-206ENST00000415332 ZFYVE28Q9HCC9 887 aa20.27■□□□□ 0.84
SYNGR1-206ENST00000415332 SERPINA10Q9UK55 444 aa20.27■□□□□ 0.84
SYNGR1-206ENST00000415332 VAMP4O75379 141 aa20.26■□□□□ 0.83
SYNGR1-206ENST00000415332 MAP3K9P80192 1104 aa20.26■□□□□ 0.83
SYNGR1-206ENST00000415332 OTUD5Q96G74 571 aa20.26■□□□□ 0.83
SYNGR1-206ENST00000415332 CNNM1Q9NRU3 951 aa20.26■□□□□ 0.83
SYNGR1-206ENST00000415332 FANCIQ9NVI1 1328 aa20.26■□□□□ 0.83
SYNGR1-206ENST00000415332 CRKP46108 304 aa20.25■□□□□ 0.83
SYNGR1-206ENST00000415332 GTF2A2P52657 109 aa20.25■□□□□ 0.83
SYNGR1-206ENST00000415332 CCDC57Q2TAC2 916 aa20.25■□□□□ 0.83
SYNGR1-206ENST00000415332 SLC4A8Q2Y0W8 1093 aa20.25■□□□□ 0.83
SYNGR1-206ENST00000415332 TAF7LQ5H9L4 462 aa20.25■□□□□ 0.83
SYNGR1-206ENST00000415332 FAM84BQ96KN1 310 aaPredicted RBP20.25■□□□□ 0.83
SYNGR1-206ENST00000415332 PUS3Q9BZE2 481 aaKnown RBP20.25■□□□□ 0.83
SYNGR1-206ENST00000415332 HIBADHP31937 336 aaKnown RBP20.24■□□□□ 0.83
SYNGR1-206ENST00000415332 SH3TC2Q8TF17 1288 aa20.24■□□□□ 0.83
SYNGR1-206ENST00000415332 CACNB3P54284 484 aa20.23■□□□□ 0.83
SYNGR1-206ENST00000415332 NBPF11Q86T75 865 aa20.23■□□□□ 0.83
SYNGR1-206ENST00000415332 IL16Q14005 1332 aa20.23■□□□□ 0.83
SYNGR1-206ENST00000415332 H0YGN5 161 aa20.22■□□□□ 0.83
SYNGR1-206ENST00000415332 ECM2O94769 699 aaPredicted RBP20.22■□□□□ 0.83
SYNGR1-206ENST00000415332 EXOSC9Q06265 439 aaKnown RBP20.22■□□□□ 0.83
SYNGR1-206ENST00000415332 UBE4AQ14139 1066 aa20.22■□□□□ 0.83
SYNGR1-206ENST00000415332 IQSEC3Q9UPP2 1182 aaPredicted RBP20.22■□□□□ 0.83
SYNGR1-206ENST00000415332 CSADQ9Y600 493 aa20.22■□□□□ 0.83
SYNGR1-206ENST00000415332 SNCAIPQ9Y6H5 919 aa20.22■□□□□ 0.83
SYNGR1-206ENST00000415332 SPDYE5A6NIY4 337 aa20.21■□□□□ 0.83
SYNGR1-206ENST00000415332 GRM8O00222 908 aa20.21■□□□□ 0.83
SYNGR1-206ENST00000415332 ARHGEF6Q15052 776 aa20.21■□□□□ 0.83
SYNGR1-206ENST00000415332 BTBD19C9JJ37 291 aa20.2■□□□□ 0.82
SYNGR1-206ENST00000415332 TLR2O60603 784 aa20.2■□□□□ 0.82
SYNGR1-206ENST00000415332 TNNI2P48788 182 aa20.2■□□□□ 0.82
SYNGR1-206ENST00000415332 LACTBP83111 547 aaPredicted RBP20.2■□□□□ 0.82
SYNGR1-206ENST00000415332 ZKSCAN4Q969J2 545 aaPredicted RBP20.2■□□□□ 0.82
SYNGR1-206ENST00000415332 SZT2Q5T011 3432 aa20.19■□□□□ 0.82
SYNGR1-206ENST00000415332 IRF6O14896 467 aa20.19■□□□□ 0.82
SYNGR1-206ENST00000415332 CTGFP29279 349 aa20.19■□□□□ 0.82
SYNGR1-206ENST00000415332 CHAF1AQ13111 956 aaPredicted RBP20.19■□□□□ 0.82
SYNGR1-206ENST00000415332 KAZALD1Q96I82 304 aa20.19■□□□□ 0.82
SYNGR1-206ENST00000415332 FBXO33Q7Z6M2 555 aa20.18■□□□□ 0.82
SYNGR1-206ENST00000415332 SUCLG2Q96I99 432 aa20.18■□□□□ 0.82
SYNGR1-206ENST00000415332 SALL2Q9Y467 1007 aaPredicted RBP20.18■□□□□ 0.82
SYNGR1-206ENST00000415332 RIPOR2Q9Y4F9 1068 aa20.18■□□□□ 0.82
SYNGR1-206ENST00000415332 AK9Q5TCS8 1911 aa20.17■□□□□ 0.82
SYNGR1-206ENST00000415332 CETPP11597 493 aa20.17■□□□□ 0.82
SYNGR1-206ENST00000415332 MTFR1Q15390 333 aa20.17■□□□□ 0.82
SYNGR1-206ENST00000415332 ERO1BQ86YB8 467 aa20.17■□□□□ 0.82
SYNGR1-206ENST00000415332 SHISA4Q96DD7 197 aa20.17■□□□□ 0.82
SYNGR1-206ENST00000415332 WRNIP1Q96S55 665 aa20.17■□□□□ 0.82
SYNGR1-206ENST00000415332 C9orf78Q9NZ63 289 aaPredicted RBP20.17■□□□□ 0.82
SYNGR1-206ENST00000415332 KIF22Q14807 665 aa20.16■□□□□ 0.82
SYNGR1-206ENST00000415332 SPINK5Q9NQ38 1064 aaPredicted RBP20.16■□□□□ 0.82
SYNGR1-206ENST00000415332 MYH13Q9UKX3 1938 aa20.15■□□□□ 0.82
SYNGR1-206ENST00000415332 LRRC24Q50LG9 513 aa20.15■□□□□ 0.82
SYNGR1-206ENST00000415332 SLC4A10Q6U841 1118 aa20.15■□□□□ 0.82
SYNGR1-206ENST00000415332 C17orf99Q6UX52 265 aa20.15■□□□□ 0.82
SYNGR1-206ENST00000415332 CHRDL2Q6WN34 429 aa20.15■□□□□ 0.82
SYNGR1-206ENST00000415332 ZCCHC17Q9NP64 241 aaKnown RBP20.15■□□□□ 0.82
SYNGR1-206ENST00000415332 CPA4Q9UI42 421 aa20.15■□□□□ 0.82
SYNGR1-206ENST00000415332 MGAMO43451 1857 aa20.15■□□□□ 0.82
SYNGR1-206ENST00000415332 NBPF7P0C2Y1 421 aaPredicted RBP20.14■□□□□ 0.81
SYNGR1-206ENST00000415332 HDLBPQ00341 1268 aaKnown RBP20.14■□□□□ 0.81
SYNGR1-206ENST00000415332 PPIL2Q13356 520 aa20.14■□□□□ 0.81
SYNGR1-206ENST00000415332 SNAPC2Q13487 334 aa20.14■□□□□ 0.81
SYNGR1-206ENST00000415332 APOBEC3HQ6NTF7 200 aaKnown RBP20.14■□□□□ 0.81
SYNGR1-206ENST00000415332 MIGA2Q7L4E1 593 aa20.14■□□□□ 0.81
SYNGR1-206ENST00000415332 TEKT1Q969V4 418 aa20.14■□□□□ 0.81
SYNGR1-206ENST00000415332 MROH5Q6ZUA9 1318 aa20.13■□□□□ 0.81
SYNGR1-206ENST00000415332 WDHD1O75717 1129 aaPredicted RBP20.13■□□□□ 0.81
SYNGR1-206ENST00000415332 ALDH1L1O75891 902 aa20.13■□□□□ 0.81
SYNGR1-206ENST00000415332 INPP5BP32019 993 aa20.13■□□□□ 0.81
SYNGR1-206ENST00000415332 VPS37DQ86XT2 251 aa20.13■□□□□ 0.81
SYNGR1-206ENST00000415332 ZDHHC15Q96MV8 337 aa20.13■□□□□ 0.81
SYNGR1-206ENST00000415332 PSMC4P43686 418 aa20.12■□□□□ 0.81
SYNGR1-206ENST00000415332 BCAMP50895 628 aa20.12■□□□□ 0.81
SYNGR1-206ENST00000415332 NCBP3Q53F19 620 aaKnown RBP20.12■□□□□ 0.81
SYNGR1-206ENST00000415332 FAM83AQ86UY5 434 aa20.12■□□□□ 0.81
SYNGR1-206ENST00000415332 WDR63Q8IWG1 891 aa20.12■□□□□ 0.81
SYNGR1-206ENST00000415332 VGLL2Q8N8G2 317 aa20.12■□□□□ 0.81
SYNGR1-206ENST00000415332 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.12■□□□□ 0.81
SYNGR1-206ENST00000415332 TBC1D22AQ8WUA7 517 aa20.12■□□□□ 0.81
SYNGR1-206ENST00000415332 TRIM47Q96LD4 638 aa20.12■□□□□ 0.81
SYNGR1-206ENST00000415332 SRCIN1Q9C0H9 1055 aa20.12■□□□□ 0.81
SYNGR1-206ENST00000415332 RBM27Q9P2N5 1060 aaKnown RBP20.12■□□□□ 0.81
SYNGR1-206ENST00000415332 ADGRA2Q96PE1 1338 aa20.11■□□□□ 0.81
SYNGR1-206ENST00000415332 FRAT2O75474 233 aaPredicted RBP20.11■□□□□ 0.81
SYNGR1-206ENST00000415332 GNRH1P01148 92 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms