RNA–Protein interactions for RNA: ENST00000415294.2

LINC00343-202, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 1,320 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-202ENST00000415294 PERM1Q5SV97 790 aa10.13□□□□□ -0.79
LINC00343-202ENST00000415294 TPTE2Q6XPS3 522 aa10.13□□□□□ -0.79
LINC00343-202ENST00000415294 NECAB3Q96P71 396 aaPredicted RBP10.13□□□□□ -0.79
LINC00343-202ENST00000415294 TMEM39AQ9NV64 488 aa10.13□□□□□ -0.79
LINC00343-202ENST00000415294 SAMM50Q9Y512 469 aa10.13□□□□□ -0.79
LINC00343-202ENST00000415294 GRIN2AQ12879 1464 aa10.13□□□□□ -0.79
LINC00343-202ENST00000415294 FGD5Q6ZNL6 1462 aa10.13□□□□□ -0.79
LINC00343-202ENST00000415294 METTL12A8MUP2 240 aa10.12□□□□□ -0.79
LINC00343-202ENST00000415294 FCHSD1Q86WN1 690 aa10.12□□□□□ -0.79
LINC00343-202ENST00000415294 GPR161Q8N6U8 529 aaKnown RBP10.12□□□□□ -0.79
LINC00343-202ENST00000415294 COPRSQ9NQ92 184 aa10.12□□□□□ -0.79
LINC00343-202ENST00000415294 SEC31BQ9NQW1 1179 aa10.12□□□□□ -0.79
LINC00343-202ENST00000415294 KCNQ5Q9NR82 932 aa10.12□□□□□ -0.79
LINC00343-202ENST00000415294 NAGPAQ9UK23 515 aa10.12□□□□□ -0.79
LINC00343-202ENST00000415294 SOX13Q9UN79 622 aa10.12□□□□□ -0.79
LINC00343-202ENST00000415294 NEURL1BA8MQ27 555 aa10.11□□□□□ -0.79
LINC00343-202ENST00000415294 ARID5AQ03989 594 aa10.11□□□□□ -0.79
LINC00343-202ENST00000415294 DDX54Q8TDD1 881 aaKnown RBP10.11□□□□□ -0.79
LINC00343-202ENST00000415294 LPIN3Q9BQK8 851 aa10.11□□□□□ -0.79
LINC00343-202ENST00000415294 TANGO6Q9C0B7 1094 aa10.11□□□□□ -0.79
LINC00343-202ENST00000415294 SMG9Q9H0W8 520 aaKnown RBP10.11□□□□□ -0.79
LINC00343-202ENST00000415294 GGA1Q9UJY5 639 aa10.11□□□□□ -0.79
LINC00343-202ENST00000415294 IGF1RP08069 1367 aa10.11□□□□□ -0.79
LINC00343-202ENST00000415294 PRG4Q92954 1404 aaPredicted RBP10.11□□□□□ -0.79
LINC00343-202ENST00000415294 ENC1O14682 589 aa10.1□□□□□ -0.79
LINC00343-202ENST00000415294 B3GALT4O96024 378 aa10.1□□□□□ -0.79
LINC00343-202ENST00000415294 GBP2P32456 591 aaPredicted RBP10.1□□□□□ -0.79
LINC00343-202ENST00000415294 LIG3P49916 1009 aa10.1□□□□□ -0.79
LINC00343-202ENST00000415294 KRT76Q01546 638 aa10.1□□□□□ -0.79
LINC00343-202ENST00000415294 SRSF11Q05519 484 aaKnown RBP10.1□□□□□ -0.79
LINC00343-202ENST00000415294 KANK3Q6NY19 840 aa10.1□□□□□ -0.79
LINC00343-202ENST00000415294 KIAA0825Q8IV33 1275 aa10.1□□□□□ -0.79
LINC00343-202ENST00000415294 RASGRP4Q8TDF6 673 aa10.1□□□□□ -0.79
LINC00343-202ENST00000415294 GPRASP2Q96D09 838 aa10.1□□□□□ -0.79
LINC00343-202ENST00000415294 SPON2Q9BUD6 331 aa10.1□□□□□ -0.79
LINC00343-202ENST00000415294 COL25A1Q9BXS0 654 aaPredicted RBP10.1□□□□□ -0.79
LINC00343-202ENST00000415294 GPN3Q9UHW5 284 aaPredicted RBP10.1□□□□□ -0.79
LINC00343-202ENST00000415294 CCDC88BA6NC98 1476 aa10.1□□□□□ -0.79
LINC00343-202ENST00000415294 TNNI2P48788 182 aa10.09□□□□□ -0.79
LINC00343-202ENST00000415294 CABP4P57796 275 aa10.09□□□□□ -0.79
LINC00343-202ENST00000415294 PCDH1Q08174 1060 aa10.09□□□□□ -0.79
LINC00343-202ENST00000415294 DIEXFQ68CQ4 756 aaKnown RBP10.09□□□□□ -0.79
LINC00343-202ENST00000415294 PSAPL1Q6NUJ1 521 aa10.09□□□□□ -0.79
LINC00343-202ENST00000415294 PHC3Q8NDX5 983 aa10.09□□□□□ -0.79
LINC00343-202ENST00000415294 MUC3BQ9H195 1237 aa10.09□□□□□ -0.79
LINC00343-202ENST00000415294 PRKAG2Q9UGJ0 569 aa10.09□□□□□ -0.79
LINC00343-202ENST00000415294 FBXO24O75426 580 aa10.08□□□□□ -0.8
LINC00343-202ENST00000415294 RGS9O75916 674 aaPredicted RBP10.08□□□□□ -0.8
LINC00343-202ENST00000415294 EIF4A3P38919 411 aaKnown RBP10.08□□□□□ -0.8
LINC00343-202ENST00000415294 LMNB2Q03252 620 aa10.08□□□□□ -0.8
LINC00343-202ENST00000415294 PAK2Q13177 524 aa10.08□□□□□ -0.8
LINC00343-202ENST00000415294 SCARA3Q6AZY7 606 aa10.08□□□□□ -0.8
LINC00343-202ENST00000415294 AGMOQ6ZNB7 445 aa10.08□□□□□ -0.8
LINC00343-202ENST00000415294 VN1R5Q7Z5H4 357 aa10.08□□□□□ -0.8
LINC00343-202ENST00000415294 CCDC84Q86UT8 332 aaPredicted RBP10.08□□□□□ -0.8
LINC00343-202ENST00000415294 RHOVQ96L33 236 aa10.08□□□□□ -0.8
LINC00343-202ENST00000415294 LRRC4BQ9NT99 713 aa10.08□□□□□ -0.8
LINC00343-202ENST00000415294 PCF11O94913 1555 aaKnown RBP10.08□□□□□ -0.8
LINC00343-202ENST00000415294 CELA3AP09093 270 aa10.07□□□□□ -0.8
LINC00343-202ENST00000415294 EPXP11678 715 aa10.07□□□□□ -0.8
LINC00343-202ENST00000415294 ATP2B1P20020 1258 aa10.07□□□□□ -0.8
LINC00343-202ENST00000415294 CDC27P30260 824 aa10.07□□□□□ -0.8
LINC00343-202ENST00000415294 FAAP100Q0VG06 881 aa10.07□□□□□ -0.8
LINC00343-202ENST00000415294 TTBK2Q6IQ55 1244 aa10.07□□□□□ -0.8
LINC00343-202ENST00000415294 WNT8BQ93098 351 aa10.07□□□□□ -0.8
LINC00343-202ENST00000415294 SOX17Q9H6I2 414 aaPredicted RBP10.07□□□□□ -0.8
LINC00343-202ENST00000415294 SUPT16HQ9Y5B9 1047 aaKnown RBP10.07□□□□□ -0.8
LINC00343-202ENST00000415294 COL9A2Q14055 689 aaPredicted RBP10.07□□□□□ -0.8
LINC00343-202ENST00000415294 SEC16BQ96JE7 1060 aa10.07□□□□□ -0.8
LINC00343-202ENST00000415294 NT5C1AQ9BXI3 368 aa10.07□□□□□ -0.8
LINC00343-202ENST00000415294 ADAMTS1Q9UHI8 967 aa10.07□□□□□ -0.8
LINC00343-202ENST00000415294 CYP8B1Q9UNU6 501 aa10.07□□□□□ -0.8
LINC00343-202ENST00000415294 TRIM33Q9UPN9 1127 aa10.07□□□□□ -0.8
LINC00343-202ENST00000415294 ROBO2Q9HCK4 1378 aa10.06□□□□□ -0.8
LINC00343-202ENST00000415294 LMNB1P20700 586 aa10.06□□□□□ -0.8
LINC00343-202ENST00000415294 NME2P22392 152 aa10.06□□□□□ -0.8
LINC00343-202ENST00000415294 IKBKEQ14164 716 aa10.06□□□□□ -0.8
LINC00343-202ENST00000415294 LRRC14Q15048 493 aa10.06□□□□□ -0.8
LINC00343-202ENST00000415294 RNFT1Q5M7Z0 435 aa10.06□□□□□ -0.8
LINC00343-202ENST00000415294 ZNF296Q8WUU4 475 aaPredicted RBP10.06□□□□□ -0.8
LINC00343-202ENST00000415294 TRIM56Q9BRZ2 755 aaKnown RBP10.06□□□□□ -0.8
LINC00343-202ENST00000415294 EMILIN2Q9BXX0 1053 aa10.06□□□□□ -0.8
LINC00343-202ENST00000415294 MINDY4BA8MYZ0 360 aa10.05□□□□□ -0.8
LINC00343-202ENST00000415294 H3BRJ5 948 aa10.05□□□□□ -0.8
LINC00343-202ENST00000415294 DNAJA1P31689 397 aaKnown RBP10.05□□□□□ -0.8
LINC00343-202ENST00000415294 AP3B2Q13367 1082 aa10.05□□□□□ -0.8
LINC00343-202ENST00000415294 CAMK2GQ13555 558 aaPredicted RBP10.05□□□□□ -0.8
LINC00343-202ENST00000415294 MAP3K11Q16584 847 aa10.05□□□□□ -0.8
LINC00343-202ENST00000415294 PCNX4Q63HM2 1172 aa10.05□□□□□ -0.8
LINC00343-202ENST00000415294 PTPRMP28827 1452 aa10.04□□□□□ -0.8
LINC00343-202ENST00000415294 GREM1O60565 184 aa10.04□□□□□ -0.8
LINC00343-202ENST00000415294 ESRRAP11474 423 aaPredicted RBP10.04□□□□□ -0.8
LINC00343-202ENST00000415294 ATF4P18848 351 aaPredicted RBP10.04□□□□□ -0.8
LINC00343-202ENST00000415294 ZNF423Q2M1K9 1284 aa10.04□□□□□ -0.8
LINC00343-202ENST00000415294 C20orf204Q6ZNR8 217 aa10.04□□□□□ -0.8
LINC00343-202ENST00000415294 TRIM42Q8IWZ5 723 aa10.04□□□□□ -0.8
LINC00343-202ENST00000415294 LACRTQ9GZZ8 138 aa10.04□□□□□ -0.8
LINC00343-202ENST00000415294 PPP1R1BQ9UD71 204 aaPredicted RBP10.04□□□□□ -0.8
LINC00343-202ENST00000415294 ABCA5Q8WWZ7 1642 aa10.03□□□□□ -0.8
LINC00343-202ENST00000415294 PIP4K2BP78356 416 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms