RNA–Protein interactions for RNA: ENST00000414218.1

LMBR1-203, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-203ENST00000414218 TM4SF4P48230 202 aa25.72■■□□□ 1.71
LMBR1-203ENST00000414218 MAP3K11Q16584 847 aa25.72■■□□□ 1.71
LMBR1-203ENST00000414218 MIER1Q8N108 512 aa25.72■■□□□ 1.71
LMBR1-203ENST00000414218 LPIN2Q92539 896 aa25.72■■□□□ 1.71
LMBR1-203ENST00000414218 SLC10A4Q96EP9 437 aa25.72■■□□□ 1.71
LMBR1-203ENST00000414218 CCDC85CA6NKD9 419 aa25.71■■□□□ 1.71
LMBR1-203ENST00000414218 CIAO1O76071 339 aa25.71■■□□□ 1.71
LMBR1-203ENST00000414218 SPRYD7Q5W111 196 aa25.71■■□□□ 1.71
LMBR1-203ENST00000414218 INTS3Q68E01 1043 aaKnown RBP25.71■■□□□ 1.71
LMBR1-203ENST00000414218 TNFAIP1Q13829 316 aa25.7■■□□□ 1.7
LMBR1-203ENST00000414218 CLMNQ96JQ2 1002 aa25.7■■□□□ 1.7
LMBR1-203ENST00000414218 CEP126Q9P2H0 1117 aa25.7■■□□□ 1.7
LMBR1-203ENST00000414218 FBXO3Q9UK99 471 aa25.7■■□□□ 1.7
LMBR1-203ENST00000414218 PA2G4Q9UQ80 394 aaKnown RBP25.7■■□□□ 1.7
LMBR1-203ENST00000414218 TCP10L2B9ZVM9 353 aa25.69■■□□□ 1.7
LMBR1-203ENST00000414218 TBC1D8O95759 1140 aa25.69■■□□□ 1.7
LMBR1-203ENST00000414218 HDLBPQ00341 1268 aaKnown RBP25.69■■□□□ 1.7
LMBR1-203ENST00000414218 IPO8O15397 1037 aaKnown RBP25.68■■□□□ 1.7
LMBR1-203ENST00000414218 USP2O75604 605 aaPredicted RBP25.68■■□□□ 1.7
LMBR1-203ENST00000414218 BCAR3O75815 825 aa25.68■■□□□ 1.7
LMBR1-203ENST00000414218 SREBF2Q12772 1141 aa25.68■■□□□ 1.7
LMBR1-203ENST00000414218 ATP2B3Q16720 1220 aa25.68■■□□□ 1.7
LMBR1-203ENST00000414218 TEKT1Q969V4 418 aa25.68■■□□□ 1.7
LMBR1-203ENST00000414218 MYH13Q9UKX3 1938 aa25.67■■□□□ 1.7
LMBR1-203ENST00000414218 FRAT1Q92837 279 aaPredicted RBP25.67■■□□□ 1.7
LMBR1-203ENST00000414218 TNNQ9UQP3 1299 aa25.67■■□□□ 1.7
LMBR1-203ENST00000414218 GNAI3P08754 354 aa25.66■■□□□ 1.7
LMBR1-203ENST00000414218 IL15P40933 162 aaPredicted RBP25.66■■□□□ 1.7
LMBR1-203ENST00000414218 IREB2P48200 963 aaKnown RBP25.66■■□□□ 1.7
LMBR1-203ENST00000414218 CDAN1Q8IWY9 1227 aa25.66■■□□□ 1.7
LMBR1-203ENST00000414218 TEPSINQ96N21 525 aa25.66■■□□□ 1.7
LMBR1-203ENST00000414218 MRIQ9BWK5 157 aa25.66■■□□□ 1.7
LMBR1-203ENST00000414218 TMEM39BQ9GZU3 492 aa25.66■■□□□ 1.7
LMBR1-203ENST00000414218 SUGT1Q9Y2Z0 365 aa25.66■■□□□ 1.7
LMBR1-203ENST00000414218 TRIM27P14373 513 aa25.65■■□□□ 1.7
LMBR1-203ENST00000414218 TNNI2P48788 182 aa25.65■■□□□ 1.7
LMBR1-203ENST00000414218 CACNB3P54284 484 aa25.65■■□□□ 1.7
LMBR1-203ENST00000414218 HNRNPUQ00839 825 aaKnown RBP eCLIP25.65■■□□□ 1.7
LMBR1-203ENST00000414218 WDR66Q8TBY9 1149 aa25.65■■□□□ 1.7
LMBR1-203ENST00000414218 WNK4Q96J92 1243 aa25.65■■□□□ 1.7
LMBR1-203ENST00000414218 ZDHHC15Q96MV8 337 aa25.65■■□□□ 1.7
LMBR1-203ENST00000414218 COPRSQ9NQ92 184 aa25.65■■□□□ 1.7
LMBR1-203ENST00000414218 MAST3O60307 1309 aa25.64■■□□□ 1.7
LMBR1-203ENST00000414218 UNCXA6NJT0 531 aa25.64■■□□□ 1.7
LMBR1-203ENST00000414218 ATF7IPQ6VMQ6 1270 aa25.64■■□□□ 1.7
LMBR1-203ENST00000414218 MANSC4A6NHS7 340 aaPredicted RBP25.63■■□□□ 1.69
LMBR1-203ENST00000414218 APOBEC3HQ6NTF7 200 aaKnown RBP25.63■■□□□ 1.69
LMBR1-203ENST00000414218 ANKRD13AQ8IZ07 590 aa25.63■■□□□ 1.69
LMBR1-203ENST00000414218 SRGAP3O43295 1099 aa25.62■■□□□ 1.69
LMBR1-203ENST00000414218 ZBTB48P10074 688 aaPredicted RBP25.62■■□□□ 1.69
LMBR1-203ENST00000414218 ZNF296Q8WUU4 475 aaPredicted RBP25.62■■□□□ 1.69
LMBR1-203ENST00000414218 CLUAP1Q96AJ1 413 aa25.62■■□□□ 1.69
LMBR1-203ENST00000414218 GNL3LQ9NVN8 582 aaKnown RBP25.62■■□□□ 1.69
LMBR1-203ENST00000414218 PHKA1P46020 1223 aa25.61■■□□□ 1.69
LMBR1-203ENST00000414218 HHIPL2Q6UWX4 724 aa25.61■■□□□ 1.69
LMBR1-203ENST00000414218 CTU1Q7Z7A3 348 aaKnown RBP25.61■■□□□ 1.69
LMBR1-203ENST00000414218 ADORA1P30542 326 aa25.6■■□□□ 1.69
LMBR1-203ENST00000414218 GJA5P36382 358 aa25.6■■□□□ 1.69
LMBR1-203ENST00000414218 INHBEP58166 350 aa25.6■■□□□ 1.69
LMBR1-203ENST00000414218 R3HDMLQ9H3Y0 253 aa25.6■■□□□ 1.69
LMBR1-203ENST00000414218 TMOD2Q9NZR1 351 aa25.6■■□□□ 1.69
LMBR1-203ENST00000414218 OTOFQ9HC10 1997 aa25.6■■□□□ 1.69
LMBR1-203ENST00000414218 GPR25O00155 361 aa25.59■■□□□ 1.69
LMBR1-203ENST00000414218 MTX1Q13505 466 aa25.59■■□□□ 1.69
LMBR1-203ENST00000414218 IFNL1Q8IU54 200 aa25.59■■□□□ 1.69
LMBR1-203ENST00000414218 ELP3Q9H9T3 547 aa25.59■■□□□ 1.69
LMBR1-203ENST00000414218 GNAI2P04899 355 aa25.58■■□□□ 1.69
LMBR1-203ENST00000414218 TIMM10P62072 90 aa25.58■■□□□ 1.69
LMBR1-203ENST00000414218 CFHR5Q9BXR6 569 aa25.58■■□□□ 1.69
LMBR1-203ENST00000414218 DENND2AQ9ULE3 1009 aa25.58■■□□□ 1.69
LMBR1-203ENST00000414218 ALDH1A1P00352 501 aa25.57■■□□□ 1.68
LMBR1-203ENST00000414218 LDHBP07195 334 aaKnown RBP25.57■■□□□ 1.68
LMBR1-203ENST00000414218 PRDX5P30044 214 aa25.57■■□□□ 1.68
LMBR1-203ENST00000414218 TFCP2Q12800 502 aa25.57■■□□□ 1.68
LMBR1-203ENST00000414218 DIXDC1Q155Q3 683 aa25.57■■□□□ 1.68
LMBR1-203ENST00000414218 NOM1Q5C9Z4 860 aaKnown RBP25.57■■□□□ 1.68
LMBR1-203ENST00000414218 FKBP1CQ5VVH2 108 aa25.57■■□□□ 1.68
LMBR1-203ENST00000414218 CCDC102BQ68D86 513 aa25.57■■□□□ 1.68
LMBR1-203ENST00000414218 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.57■■□□□ 1.68
LMBR1-203ENST00000414218 FAM83AQ86UY5 434 aa25.57■■□□□ 1.68
LMBR1-203ENST00000414218 IGF2BP3O00425 579 aaKnown RBP eCLIP25.56■■□□□ 1.68
LMBR1-203ENST00000414218 SEMA3EO15041 775 aa25.56■■□□□ 1.68
LMBR1-203ENST00000414218 MAP3K9P80192 1104 aa25.56■■□□□ 1.68
LMBR1-203ENST00000414218 ZKSCAN2Q63HK3 967 aa25.56■■□□□ 1.68
LMBR1-203ENST00000414218 TMEM57Q8N5G2 664 aa25.56■■□□□ 1.68
LMBR1-203ENST00000414218 OPTNQ96CV9 577 aa25.56■■□□□ 1.68
LMBR1-203ENST00000414218 DAGLAQ9Y4D2 1042 aa25.56■■□□□ 1.68
LMBR1-203ENST00000414218 LAMB1P07942 1786 aa25.56■■□□□ 1.68
LMBR1-203ENST00000414218 A0A1B0GUL7 405 aa25.54■■□□□ 1.68
LMBR1-203ENST00000414218 FKTNO75072 461 aa25.54■■□□□ 1.68
LMBR1-203ENST00000414218 VGLL4Q14135 290 aa25.54■■□□□ 1.68
LMBR1-203ENST00000414218 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.54■■□□□ 1.68
LMBR1-203ENST00000414218 CNKSR2Q8WXI2 1034 aa25.54■■□□□ 1.68
LMBR1-203ENST00000414218 AKAP2Q9Y2D5 859 aa25.54■■□□□ 1.68
LMBR1-203ENST00000414218 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.54■■□□□ 1.68
LMBR1-203ENST00000414218 SALL1Q9NSC2 1324 aa25.54■■□□□ 1.68
LMBR1-203ENST00000414218 PNMA6EA0A0J9YXQ4 647 aa25.53■■□□□ 1.68
LMBR1-203ENST00000414218 RGS19P49795 217 aa25.53■■□□□ 1.68
LMBR1-203ENST00000414218 CDC42EP5Q6NZY7 148 aa25.53■■□□□ 1.68
LMBR1-203ENST00000414218 XAGE2Q96GT9 111 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms