RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 ZNF512BQ96KM6 892 aaPredicted RBP12.71□□□□□ -0.37
HLA-DMB-257ENST00000414017 GMLQ99445 158 aa12.71□□□□□ -0.37
HLA-DMB-257ENST00000414017 TAF1DQ9H5J8 278 aaPredicted RBP12.71□□□□□ -0.37
HLA-DMB-257ENST00000414017 MYOZ2Q9NPC6 264 aa12.71□□□□□ -0.37
HLA-DMB-257ENST00000414017 ADARB2Q9NS39 739 aaKnown RBP12.71□□□□□ -0.37
HLA-DMB-257ENST00000414017 PSME4Q14997 1843 aa12.71□□□□□ -0.38
HLA-DMB-257ENST00000414017 CYP2E1P05181 493 aaPredicted RBP12.7□□□□□ -0.38
HLA-DMB-257ENST00000414017 FKBP1AP62942 108 aaKnown RBP12.7□□□□□ -0.38
HLA-DMB-257ENST00000414017 DIXDC1Q155Q3 683 aa12.7□□□□□ -0.38
HLA-DMB-257ENST00000414017 KIF4BQ2VIQ3 1234 aa12.7□□□□□ -0.38
HLA-DMB-257ENST00000414017 CFAP100Q494V2 611 aa12.7□□□□□ -0.38
HLA-DMB-257ENST00000414017 SKAP1Q86WV1 359 aa12.7□□□□□ -0.38
HLA-DMB-257ENST00000414017 ANTXR1Q9H6X2 564 aa12.7□□□□□ -0.38
HLA-DMB-257ENST00000414017 PIH1D3Q9NQM4 214 aaKnown RBP12.7□□□□□ -0.38
HLA-DMB-257ENST00000414017 PAG1Q9NWQ8 432 aa12.7□□□□□ -0.38
HLA-DMB-257ENST00000414017 PCDHAC2Q9Y5I4 1007 aa12.7□□□□□ -0.38
HLA-DMB-257ENST00000414017 WDR90Q96KV7 1748 aa12.7□□□□□ -0.38
HLA-DMB-257ENST00000414017 PDS5AQ29RF7 1337 aaKnown RBP12.69□□□□□ -0.38
HLA-DMB-257ENST00000414017 TTC41PQ6P2S7 1318 aa12.69□□□□□ -0.38
HLA-DMB-257ENST00000414017 EGFRP00533 1210 aa12.69□□□□□ -0.38
HLA-DMB-257ENST00000414017 POTEIP0CG38 1075 aa12.69□□□□□ -0.38
HLA-DMB-257ENST00000414017 POTEJP0CG39 1038 aa12.69□□□□□ -0.38
HLA-DMB-257ENST00000414017 PDE4AP27815 886 aa12.69□□□□□ -0.38
HLA-DMB-257ENST00000414017 PDE1AP54750 535 aa12.69□□□□□ -0.38
HLA-DMB-257ENST00000414017 DLGAP5Q15398 846 aa12.69□□□□□ -0.38
HLA-DMB-257ENST00000414017 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.69□□□□□ -0.38
HLA-DMB-257ENST00000414017 HAUS7Q99871 368 aa12.69□□□□□ -0.38
HLA-DMB-257ENST00000414017 ZNF646O15015 1829 aaPredicted RBP12.69□□□□□ -0.38
HLA-DMB-257ENST00000414017 MAST3O60307 1309 aa12.68□□□□□ -0.38
HLA-DMB-257ENST00000414017 SALL1Q9NSC2 1324 aa12.68□□□□□ -0.38
HLA-DMB-257ENST00000414017 GLRX3O76003 335 aaKnown RBP12.68□□□□□ -0.38
HLA-DMB-257ENST00000414017 CRKP46108 304 aa12.68□□□□□ -0.38
HLA-DMB-257ENST00000414017 ZNF280AP59817 542 aaPredicted RBP12.68□□□□□ -0.38
HLA-DMB-257ENST00000414017 MECOMQ03112 1051 aa12.68□□□□□ -0.38
HLA-DMB-257ENST00000414017 TTF1Q15361 905 aaPredicted RBP12.68□□□□□ -0.38
HLA-DMB-257ENST00000414017 PNMA8AQ86V59 439 aaPredicted RBP12.68□□□□□ -0.38
HLA-DMB-257ENST00000414017 PLEKHM2Q8IWE5 1019 aa12.68□□□□□ -0.38
HLA-DMB-257ENST00000414017 TEKT1Q969V4 418 aa12.68□□□□□ -0.38
HLA-DMB-257ENST00000414017 SCN4AP35499 1836 aa12.67□□□□□ -0.38
HLA-DMB-257ENST00000414017 TRIM6-TRIM34B2RNG4 842 aa12.67□□□□□ -0.38
HLA-DMB-257ENST00000414017 KIF3CO14782 793 aa12.67□□□□□ -0.38
HLA-DMB-257ENST00000414017 RGS3P49796 1198 aa12.67□□□□□ -0.38
HLA-DMB-257ENST00000414017 HIRAP54198 1017 aaPredicted RBP12.67□□□□□ -0.38
HLA-DMB-257ENST00000414017 MAP3K12Q12852 859 aa12.67□□□□□ -0.38
HLA-DMB-257ENST00000414017 NBPF9Q3BBW0 867 aa12.67□□□□□ -0.38
HLA-DMB-257ENST00000414017 NAA16Q6N069 864 aaPredicted RBP12.67□□□□□ -0.38
HLA-DMB-257ENST00000414017 USP50Q70EL3 339 aaPredicted RBP12.67□□□□□ -0.38
HLA-DMB-257ENST00000414017 MAGEB6Q8N7X4 407 aa12.67□□□□□ -0.38
HLA-DMB-257ENST00000414017 PI4K2BQ8TCG2 481 aa12.67□□□□□ -0.38
HLA-DMB-257ENST00000414017 RILPL2Q969X0 211 aa12.67□□□□□ -0.38
HLA-DMB-257ENST00000414017 VEZTQ9HBM0 779 aa12.67□□□□□ -0.38
HLA-DMB-257ENST00000414017 SCAF8Q9UPN6 1271 aaKnown RBP12.67□□□□□ -0.38
HLA-DMB-257ENST00000414017 SUGT1Q9Y2Z0 365 aa12.67□□□□□ -0.38
HLA-DMB-257ENST00000414017 AKAP11Q9UKA4 1901 aa12.66□□□□□ -0.38
HLA-DMB-257ENST00000414017 ASTN2O75129 1339 aaPredicted RBP12.66□□□□□ -0.38
HLA-DMB-257ENST00000414017 SALL3Q9BXA9 1300 aa12.66□□□□□ -0.38
HLA-DMB-257ENST00000414017 CLRN2A0PK11 232 aa12.66□□□□□ -0.38
HLA-DMB-257ENST00000414017 GSTO1P78417 241 aa12.66□□□□□ -0.38
HLA-DMB-257ENST00000414017 SLF2Q8IX21 1173 aa12.66□□□□□ -0.38
HLA-DMB-257ENST00000414017 NOL10Q9BSC4 688 aaKnown RBP12.66□□□□□ -0.38
HLA-DMB-257ENST00000414017 STAP2Q9UGK3 403 aa12.66□□□□□ -0.38
HLA-DMB-257ENST00000414017 SERPINA10Q9UK55 444 aa12.66□□□□□ -0.38
HLA-DMB-257ENST00000414017 ADAMTSL1Q8N6G6 1762 aa12.66□□□□□ -0.38
HLA-DMB-257ENST00000414017 WNT10BO00744 389 aa12.65□□□□□ -0.38
HLA-DMB-257ENST00000414017 MYO1BO43795 1136 aa12.65□□□□□ -0.38
HLA-DMB-257ENST00000414017 CYP7A1P22680 504 aa12.65□□□□□ -0.38
HLA-DMB-257ENST00000414017 SLC9C2Q5TAH2 1124 aa12.65□□□□□ -0.38
HLA-DMB-257ENST00000414017 ANGEL2Q5VTE6 544 aaKnown RBP12.65□□□□□ -0.38
HLA-DMB-257ENST00000414017 MAP1SQ66K74 1059 aaPredicted RBP12.65□□□□□ -0.38
HLA-DMB-257ENST00000414017 LDHDQ86WU2 507 aa12.65□□□□□ -0.38
HLA-DMB-257ENST00000414017 DCPSQ96C86 337 aaKnown RBP12.65□□□□□ -0.38
HLA-DMB-257ENST00000414017 NSUN4Q96CB9 384 aaKnown RBP12.65□□□□□ -0.38
HLA-DMB-257ENST00000414017 PRMT6Q96LA8 375 aaPredicted RBP12.65□□□□□ -0.38
HLA-DMB-257ENST00000414017 FSD1Q9BTV5 496 aa12.65□□□□□ -0.38
HLA-DMB-257ENST00000414017 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.65□□□□□ -0.38
HLA-DMB-257ENST00000414017 TDRD3Q9H7E2 651 aaKnown RBP12.65□□□□□ -0.38
HLA-DMB-257ENST00000414017 GGA3Q9NZ52 723 aa12.65□□□□□ -0.38
HLA-DMB-257ENST00000414017 DAGLAQ9Y4D2 1042 aa12.65□□□□□ -0.38
HLA-DMB-257ENST00000414017 AOX1Q06278 1338 aa12.64□□□□□ -0.39
HLA-DMB-257ENST00000414017 SPDYE2BA6NHP3 402 aa12.64□□□□□ -0.39
HLA-DMB-257ENST00000414017 ZBTB22O15209 634 aa12.64□□□□□ -0.39
HLA-DMB-257ENST00000414017 LDHCP07864 332 aa12.64□□□□□ -0.39
HLA-DMB-257ENST00000414017 SPDYE6P0CI01 402 aa12.64□□□□□ -0.39
HLA-DMB-257ENST00000414017 BTDP43251 543 aa12.64□□□□□ -0.39
HLA-DMB-257ENST00000414017 MMP14P50281 582 aa12.64□□□□□ -0.39
HLA-DMB-257ENST00000414017 CACNB3P54284 484 aa12.64□□□□□ -0.39
HLA-DMB-257ENST00000414017 SLFNL1Q499Z3 407 aa12.64□□□□□ -0.39
HLA-DMB-257ENST00000414017 MIGA1Q8NAN2 632 aa12.64□□□□□ -0.39
HLA-DMB-257ENST00000414017 GTF3C3Q9Y5Q9 886 aa12.64□□□□□ -0.39
HLA-DMB-257ENST00000414017 MROH7-TTC4A0A0A0MT08 1334 aa12.63□□□□□ -0.39
HLA-DMB-257ENST00000414017 TCP10L2B9ZVM9 353 aa12.63□□□□□ -0.39
HLA-DMB-257ENST00000414017 CHGBP05060 677 aa12.63□□□□□ -0.39
HLA-DMB-257ENST00000414017 PDE6AP16499 860 aa12.63□□□□□ -0.39
HLA-DMB-257ENST00000414017 HDLBPQ00341 1268 aaKnown RBP12.63□□□□□ -0.39
HLA-DMB-257ENST00000414017 CHADLQ6NUI6 762 aa12.63□□□□□ -0.39
HLA-DMB-257ENST00000414017 HHIPL2Q6UWX4 724 aa12.63□□□□□ -0.39
HLA-DMB-257ENST00000414017 CNTROBQ8N137 903 aa12.63□□□□□ -0.39
HLA-DMB-257ENST00000414017 ZNF384Q8TF68 577 aa12.63□□□□□ -0.39
HLA-DMB-257ENST00000414017 ZDHHC15Q96MV8 337 aa12.63□□□□□ -0.39
HLA-DMB-257ENST00000414017 USP40Q9NVE5 1235 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms