RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 ATP2B3Q16720 1220 aa20.93■□□□□ 0.94
COL6A2-205ENST00000413758 SPDYE2Q495Y8 402 aa20.93■□□□□ 0.94
COL6A2-205ENST00000413758 INTS3Q68E01 1043 aaKnown RBP20.93■□□□□ 0.94
COL6A2-205ENST00000413758 ATG9AQ7Z3C6 839 aa20.93■□□□□ 0.94
COL6A2-205ENST00000413758 SLC10A4Q96EP9 437 aa20.93■□□□□ 0.94
COL6A2-205ENST00000413758 ARAP2Q8WZ64 1704 aa20.92■□□□□ 0.94
COL6A2-205ENST00000413758 TCP10L2B9ZVM9 353 aa20.92■□□□□ 0.94
COL6A2-205ENST00000413758 BCAR3O75815 825 aa20.92■□□□□ 0.94
COL6A2-205ENST00000413758 CIAO1O76071 339 aa20.92■□□□□ 0.94
COL6A2-205ENST00000413758 GRIK5Q16478 980 aa20.92■□□□□ 0.94
COL6A2-205ENST00000413758 NBPF12Q5TAG4 269 aaPredicted RBP20.92■□□□□ 0.94
COL6A2-205ENST00000413758 TEKT1Q969V4 418 aa20.92■□□□□ 0.94
COL6A2-205ENST00000413758 FBXO3Q9UK99 471 aa20.92■□□□□ 0.94
COL6A2-205ENST00000413758 PA2G4Q9UQ80 394 aaKnown RBP20.92■□□□□ 0.94
COL6A2-205ENST00000413758 CCDC85CA6NKD9 419 aa20.91■□□□□ 0.94
COL6A2-205ENST00000413758 IL15P40933 162 aaPredicted RBP20.91■□□□□ 0.94
COL6A2-205ENST00000413758 IREB2P48200 963 aaKnown RBP20.91■□□□□ 0.94
COL6A2-205ENST00000413758 TNNI2P48788 182 aa20.91■□□□□ 0.94
COL6A2-205ENST00000413758 LDLRAD1Q5T700 205 aa20.91■□□□□ 0.94
COL6A2-205ENST00000413758 CLUAP1Q96AJ1 413 aa20.91■□□□□ 0.94
COL6A2-205ENST00000413758 MCOLN1Q9GZU1 580 aa20.91■□□□□ 0.94
COL6A2-205ENST00000413758 GNL3LQ9NVN8 582 aaKnown RBP20.91■□□□□ 0.94
COL6A2-205ENST00000413758 MAST3O60307 1309 aa20.9■□□□□ 0.94
COL6A2-205ENST00000413758 SREBF2Q12772 1141 aa20.9■□□□□ 0.94
COL6A2-205ENST00000413758 TMOD2Q9NZR1 351 aa20.9■□□□□ 0.94
COL6A2-205ENST00000413758 SRGAP3O43295 1099 aa20.89■□□□□ 0.93
COL6A2-205ENST00000413758 TRIM27P14373 513 aa20.89■□□□□ 0.93
COL6A2-205ENST00000413758 HDLBPQ00341 1268 aaKnown RBP20.89■□□□□ 0.93
COL6A2-205ENST00000413758 ATF7IPQ6VMQ6 1270 aa20.89■□□□□ 0.93
COL6A2-205ENST00000413758 WDR66Q8TBY9 1149 aa20.89■□□□□ 0.93
COL6A2-205ENST00000413758 SPRYD7Q5W111 196 aa20.88■□□□□ 0.93
COL6A2-205ENST00000413758 CLMNQ96JQ2 1002 aa20.88■□□□□ 0.93
COL6A2-205ENST00000413758 COPRSQ9NQ92 184 aa20.88■□□□□ 0.93
COL6A2-205ENST00000413758 TNNQ9UQP3 1299 aa20.88■□□□□ 0.93
COL6A2-205ENST00000413758 SSC5DA1L4H1 1573 aa20.88■□□□□ 0.93
COL6A2-205ENST00000413758 TBC1D8O95759 1140 aa20.87■□□□□ 0.93
COL6A2-205ENST00000413758 CACNB3P54284 484 aa20.87■□□□□ 0.93
COL6A2-205ENST00000413758 MAP3K11Q16584 847 aa20.87■□□□□ 0.93
COL6A2-205ENST00000413758 TMEM39BQ9GZU3 492 aa20.87■□□□□ 0.93
COL6A2-205ENST00000413758 SUGT1Q9Y2Z0 365 aa20.87■□□□□ 0.93
COL6A2-205ENST00000413758 MYH13Q9UKX3 1938 aa20.86■□□□□ 0.93
COL6A2-205ENST00000413758 USP2O75604 605 aaPredicted RBP20.86■□□□□ 0.93
COL6A2-205ENST00000413758 TM4SF4P48230 202 aa20.86■□□□□ 0.93
COL6A2-205ENST00000413758 ZKSCAN2Q63HK3 967 aa20.86■□□□□ 0.93
COL6A2-205ENST00000413758 GNAI2P04899 355 aa20.85■□□□□ 0.93
COL6A2-205ENST00000413758 ANKRD13AQ8IZ07 590 aa20.85■□□□□ 0.93
COL6A2-205ENST00000413758 WNK4Q96J92 1243 aa20.85■□□□□ 0.93
COL6A2-205ENST00000413758 ZDHHC15Q96MV8 337 aa20.85■□□□□ 0.93
COL6A2-205ENST00000413758 MANSC4A6NHS7 340 aaPredicted RBP20.84■□□□□ 0.93
COL6A2-205ENST00000413758 PHKA1P46020 1223 aa20.84■□□□□ 0.93
COL6A2-205ENST00000413758 MRIQ9BWK5 157 aa20.84■□□□□ 0.93
COL6A2-205ENST00000413758 DENND2AQ9ULE3 1009 aa20.84■□□□□ 0.93
COL6A2-205ENST00000413758 UNCXA6NJT0 531 aa20.83■□□□□ 0.93
COL6A2-205ENST00000413758 LDHBP07195 334 aaKnown RBP20.83■□□□□ 0.93
COL6A2-205ENST00000413758 ZBTB48P10074 688 aaPredicted RBP20.83■□□□□ 0.93
COL6A2-205ENST00000413758 ADORA1P30542 326 aa20.83■□□□□ 0.93
COL6A2-205ENST00000413758 HHIPL2Q6UWX4 724 aa20.83■□□□□ 0.93
COL6A2-205ENST00000413758 CDAN1Q8IWY9 1227 aa20.83■□□□□ 0.93
COL6A2-205ENST00000413758 ELP3Q9H9T3 547 aa20.83■□□□□ 0.93
COL6A2-205ENST00000413758 AKAP2Q9Y2D5 859 aa20.83■□□□□ 0.93
COL6A2-205ENST00000413758 TIMM10P62072 90 aa20.82■□□□□ 0.92
COL6A2-205ENST00000413758 TFCP2Q12800 502 aa20.82■□□□□ 0.92
COL6A2-205ENST00000413758 APOBEC3HQ6NTF7 200 aaKnown RBP20.82■□□□□ 0.92
COL6A2-205ENST00000413758 FTSJ3Q8IY81 847 aaKnown RBP20.82■□□□□ 0.92
COL6A2-205ENST00000413758 TMEM57Q8N5G2 664 aa20.82■□□□□ 0.92
COL6A2-205ENST00000413758 TEPSINQ96N21 525 aa20.82■□□□□ 0.92
COL6A2-205ENST00000413758 SEMA3EO15041 775 aa20.81■□□□□ 0.92
COL6A2-205ENST00000413758 ALDH1A1P00352 501 aa20.81■□□□□ 0.92
COL6A2-205ENST00000413758 INHBEP58166 350 aa20.81■□□□□ 0.92
COL6A2-205ENST00000413758 G3BP1Q13283 466 aaKnown RBP eCLIP20.81■□□□□ 0.92
COL6A2-205ENST00000413758 MTX1Q13505 466 aa20.81■□□□□ 0.92
COL6A2-205ENST00000413758 DIXDC1Q155Q3 683 aa20.81■□□□□ 0.92
COL6A2-205ENST00000413758 CCDC102BQ68D86 513 aa20.81■□□□□ 0.92
COL6A2-205ENST00000413758 CTU1Q7Z7A3 348 aaKnown RBP20.81■□□□□ 0.92
COL6A2-205ENST00000413758 NEUROD6Q96NK8 337 aa20.81■□□□□ 0.92
COL6A2-205ENST00000413758 CSADQ9Y600 493 aa20.81■□□□□ 0.92
COL6A2-205ENST00000413758 PRDX5P30044 214 aa20.8■□□□□ 0.92
COL6A2-205ENST00000413758 GORABQ5T7V8 394 aa20.8■□□□□ 0.92
COL6A2-205ENST00000413758 ZNF296Q8WUU4 475 aaPredicted RBP20.8■□□□□ 0.92
COL6A2-205ENST00000413758 HOOK2Q96ED9 719 aa20.8■□□□□ 0.92
COL6A2-205ENST00000413758 A0A1B0GUL7 405 aa20.79■□□□□ 0.92
COL6A2-205ENST00000413758 GPR25O00155 361 aa20.79■□□□□ 0.92
COL6A2-205ENST00000413758 MAP3K9P80192 1104 aa20.79■□□□□ 0.92
COL6A2-205ENST00000413758 MVPQ14764 893 aaKnown RBP20.79■□□□□ 0.92
COL6A2-205ENST00000413758 FAM83AQ86UY5 434 aa20.79■□□□□ 0.92
COL6A2-205ENST00000413758 IFNL1Q8IU54 200 aa20.79■□□□□ 0.92
COL6A2-205ENST00000413758 ZGPATQ8N5A5 531 aaKnown RBP20.79■□□□□ 0.92
COL6A2-205ENST00000413758 OPTNQ96CV9 577 aa20.79■□□□□ 0.92
COL6A2-205ENST00000413758 DAGLAQ9Y4D2 1042 aa20.79■□□□□ 0.92
COL6A2-205ENST00000413758 FKBP1CQ5VVH2 108 aa20.78■□□□□ 0.92
COL6A2-205ENST00000413758 OTUD7BQ6GQQ9 843 aa20.78■□□□□ 0.92
COL6A2-205ENST00000413758 ITPRIPQ8IWB1 547 aa20.78■□□□□ 0.92
COL6A2-205ENST00000413758 XAGE2Q96GT9 111 aa20.78■□□□□ 0.92
COL6A2-205ENST00000413758 ABCF2Q9UG63 623 aa20.78■□□□□ 0.92
COL6A2-205ENST00000413758 PNMA6EA0A0J9YXQ4 647 aa20.77■□□□□ 0.92
COL6A2-205ENST00000413758 FKTNO75072 461 aa20.77■□□□□ 0.92
COL6A2-205ENST00000413758 GJA5P36382 358 aa20.77■□□□□ 0.92
COL6A2-205ENST00000413758 TCP10Q12799 353 aa20.77■□□□□ 0.92
COL6A2-205ENST00000413758 OS9Q13438 667 aaPredicted RBP20.77■□□□□ 0.92
COL6A2-205ENST00000413758 DCAF15Q66K64 600 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms