RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 CWF19L2Q2TBE0 894 aaKnown RBP10.55□□□□□ -0.72
UPF3AP1-201ENST00000413731 NOM1Q5C9Z4 860 aaKnown RBP10.55□□□□□ -0.72
UPF3AP1-201ENST00000413731 STRIP1Q5VSL9 837 aa10.55□□□□□ -0.72
UPF3AP1-201ENST00000413731 KIAA0825Q8IV33 1275 aa10.55□□□□□ -0.72
UPF3AP1-201ENST00000413731 COA1Q9GZY4 146 aa10.55□□□□□ -0.72
UPF3AP1-201ENST00000413731 BSDC1Q9NW68 430 aaPredicted RBP10.55□□□□□ -0.72
UPF3AP1-201ENST00000413731 ZSWIM8A7E2V4 1837 aa10.54□□□□□ -0.72
UPF3AP1-201ENST00000413731 FKTNO75072 461 aa10.54□□□□□ -0.72
UPF3AP1-201ENST00000413731 CCDC27Q2M243 656 aa10.54□□□□□ -0.72
UPF3AP1-201ENST00000413731 SPRYD7Q5W111 196 aa10.54□□□□□ -0.72
UPF3AP1-201ENST00000413731 ARMC9Q7Z3E5 817 aa10.54□□□□□ -0.72
UPF3AP1-201ENST00000413731 APOBEC3FQ8IUX4 373 aaKnown RBP10.54□□□□□ -0.72
UPF3AP1-201ENST00000413731 OGFOD1Q8N543 542 aa10.54□□□□□ -0.72
UPF3AP1-201ENST00000413731 TSPYL6Q8N831 410 aa10.54□□□□□ -0.72
UPF3AP1-201ENST00000413731 ZBED3Q96IU2 234 aaPredicted RBP10.54□□□□□ -0.72
UPF3AP1-201ENST00000413731 CFHR5Q9BXR6 569 aa10.54□□□□□ -0.72
UPF3AP1-201ENST00000413731 C1orf115Q9H7X2 142 aa10.54□□□□□ -0.72
UPF3AP1-201ENST00000413731 ANGEL1Q9UNK9 670 aaKnown RBP10.54□□□□□ -0.72
UPF3AP1-201ENST00000413731 PI4KAP2A4QPH2 592 aa10.53□□□□□ -0.72
UPF3AP1-201ENST00000413731 NEURL1BA8MQ27 555 aa10.53□□□□□ -0.72
UPF3AP1-201ENST00000413731 HIC1Q14526 733 aa10.53□□□□□ -0.72
UPF3AP1-201ENST00000413731 LDLRAD1Q5T700 205 aa10.53□□□□□ -0.72
UPF3AP1-201ENST00000413731 CCDC30Q5VVM6 783 aa10.53□□□□□ -0.72
UPF3AP1-201ENST00000413731 KSR2Q6VAB6 950 aa10.53□□□□□ -0.72
UPF3AP1-201ENST00000413731 UBE3BQ7Z3V4 1068 aa10.53□□□□□ -0.72
UPF3AP1-201ENST00000413731 WWC1Q8IX03 1113 aa10.53□□□□□ -0.72
UPF3AP1-201ENST00000413731 PI4KAP1Q8N8J0 262 aa10.53□□□□□ -0.72
UPF3AP1-201ENST00000413731 PCDHAC2Q9Y5I4 1007 aa10.53□□□□□ -0.72
UPF3AP1-201ENST00000413731 ZNF804BA4D1E1 1349 aa10.53□□□□□ -0.72
UPF3AP1-201ENST00000413731 CENPFP49454 3210 aa10.52□□□□□ -0.72
UPF3AP1-201ENST00000413731 IGHMBP2P38935 993 aaKnown RBP10.52□□□□□ -0.73
UPF3AP1-201ENST00000413731 GTF2IP78347 998 aa10.52□□□□□ -0.73
UPF3AP1-201ENST00000413731 TTLL5Q6EMB2 1281 aa10.52□□□□□ -0.73
UPF3AP1-201ENST00000413731 CERS5Q8N5B7 392 aa10.52□□□□□ -0.73
UPF3AP1-201ENST00000413731 TSR2Q969E8 191 aaKnown RBP10.52□□□□□ -0.73
UPF3AP1-201ENST00000413731 CLMNQ96JQ2 1002 aa10.52□□□□□ -0.73
UPF3AP1-201ENST00000413731 LEMD3Q9Y2U8 911 aa10.52□□□□□ -0.73
UPF3AP1-201ENST00000413731 TRIM17Q9Y577 477 aa10.52□□□□□ -0.73
UPF3AP1-201ENST00000413731 AOX1Q06278 1338 aa10.52□□□□□ -0.73
UPF3AP1-201ENST00000413731 IRS2Q9Y4H2 1338 aa10.52□□□□□ -0.73
UPF3AP1-201ENST00000413731 BRCA2P51587 3418 aa10.51□□□□□ -0.73
UPF3AP1-201ENST00000413731 POTEFA5A3E0 1075 aa10.51□□□□□ -0.73
UPF3AP1-201ENST00000413731 C2orf72A6NCS6 295 aa10.51□□□□□ -0.73
UPF3AP1-201ENST00000413731 SNAP23O00161 211 aa10.51□□□□□ -0.73
UPF3AP1-201ENST00000413731 IGF2BP3O00425 579 aaKnown RBP eCLIP10.51□□□□□ -0.73
UPF3AP1-201ENST00000413731 ITGA6P23229 1130 aa10.51□□□□□ -0.73
UPF3AP1-201ENST00000413731 NEXNQ0ZGT2 675 aa10.51□□□□□ -0.73
UPF3AP1-201ENST00000413731 G2E3Q7L622 706 aa10.51□□□□□ -0.73
UPF3AP1-201ENST00000413731 OTOP1Q7RTM1 612 aa10.51□□□□□ -0.73
UPF3AP1-201ENST00000413731 WNK4Q96J92 1243 aa10.51□□□□□ -0.73
UPF3AP1-201ENST00000413731 BMP2KQ9NSY1 1161 aaPredicted RBP10.51□□□□□ -0.73
UPF3AP1-201ENST00000413731 IL16Q14005 1332 aa10.51□□□□□ -0.73
UPF3AP1-201ENST00000413731 CLRN2A0PK11 232 aa10.5□□□□□ -0.73
UPF3AP1-201ENST00000413731 MANSC4A6NHS7 340 aaPredicted RBP10.5□□□□□ -0.73
UPF3AP1-201ENST00000413731 H7C1W4 665 aa10.5□□□□□ -0.73
UPF3AP1-201ENST00000413731 ALDH1A1P00352 501 aa10.5□□□□□ -0.73
UPF3AP1-201ENST00000413731 OSBPP22059 807 aa10.5□□□□□ -0.73
UPF3AP1-201ENST00000413731 FECHP22830 423 aa10.5□□□□□ -0.73
UPF3AP1-201ENST00000413731 GJA5P36382 358 aa10.5□□□□□ -0.73
UPF3AP1-201ENST00000413731 KCNJ4P48050 445 aa10.5□□□□□ -0.73
UPF3AP1-201ENST00000413731 CHRNDQ07001 517 aa10.5□□□□□ -0.73
UPF3AP1-201ENST00000413731 MAP3K11Q16584 847 aa10.5□□□□□ -0.73
UPF3AP1-201ENST00000413731 DDX12PQ92771 950 aa10.5□□□□□ -0.73
UPF3AP1-201ENST00000413731 PCMTD1Q96MG8 357 aaPredicted RBP10.5□□□□□ -0.73
UPF3AP1-201ENST00000413731 PLA2G12BQ9BX93 195 aa10.5□□□□□ -0.73
UPF3AP1-201ENST00000413731 DEFB129Q9H1M3 183 aa10.5□□□□□ -0.73
UPF3AP1-201ENST00000413731 CD209Q9NNX6 404 aa10.5□□□□□ -0.73
UPF3AP1-201ENST00000413731 FANCIQ9NVI1 1328 aa10.5□□□□□ -0.73
UPF3AP1-201ENST00000413731 F8W031 263 aaPredicted RBP10.49□□□□□ -0.73
UPF3AP1-201ENST00000413731 ZBTB48P10074 688 aaPredicted RBP10.49□□□□□ -0.73
UPF3AP1-201ENST00000413731 MMP14P50281 582 aa10.49□□□□□ -0.73
UPF3AP1-201ENST00000413731 CASP7P55210 303 aa10.49□□□□□ -0.73
UPF3AP1-201ENST00000413731 CAP1Q01518 475 aa10.49□□□□□ -0.73
UPF3AP1-201ENST00000413731 GCKRQ14397 625 aa10.49□□□□□ -0.73
UPF3AP1-201ENST00000413731 DLGAP5Q15398 846 aa10.49□□□□□ -0.73
UPF3AP1-201ENST00000413731 WDR63Q8IWG1 891 aa10.49□□□□□ -0.73
UPF3AP1-201ENST00000413731 CD99L2Q8TCZ2 262 aa10.49□□□□□ -0.73
UPF3AP1-201ENST00000413731 MPHOSPH8Q99549 860 aa10.49□□□□□ -0.73
UPF3AP1-201ENST00000413731 STK31Q9BXU1 1019 aa10.49□□□□□ -0.73
UPF3AP1-201ENST00000413731 ANKRD2Q9GZV1 360 aa10.49□□□□□ -0.73
UPF3AP1-201ENST00000413731 MYH16Q9H6N6 1097 aa10.49□□□□□ -0.73
UPF3AP1-201ENST00000413731 JAG2Q9Y219 1238 aa10.49□□□□□ -0.73
UPF3AP1-201ENST00000413731 MYH13Q9UKX3 1938 aa10.48□□□□□ -0.73
UPF3AP1-201ENST00000413731 CEP290O15078 2479 aa10.48□□□□□ -0.73
UPF3AP1-201ENST00000413731 TAF5LO75529 589 aa10.48□□□□□ -0.73
UPF3AP1-201ENST00000413731 CRHR2Q13324 411 aa10.48□□□□□ -0.73
UPF3AP1-201ENST00000413731 CFAP100Q494V2 611 aa10.48□□□□□ -0.73
UPF3AP1-201ENST00000413731 MTMR14Q8NCE2 650 aa10.48□□□□□ -0.73
UPF3AP1-201ENST00000413731 GCC1Q96CN9 775 aa10.48□□□□□ -0.73
UPF3AP1-201ENST00000413731 VEZTQ9HBM0 779 aa10.48□□□□□ -0.73
UPF3AP1-201ENST00000413731 PPP2R3BQ9Y5P8 575 aa10.48□□□□□ -0.73
UPF3AP1-201ENST00000413731 CSF1RP07333 972 aa10.47□□□□□ -0.73
UPF3AP1-201ENST00000413731 HABP4Q5JVS0 413 aaKnown RBP10.47□□□□□ -0.73
UPF3AP1-201ENST00000413731 NBPF12Q5TAG4 269 aaPredicted RBP10.47□□□□□ -0.73
UPF3AP1-201ENST00000413731 HELBQ8NG08 1087 aaPredicted RBP10.47□□□□□ -0.73
UPF3AP1-201ENST00000413731 SLC10A4Q96EP9 437 aa10.47□□□□□ -0.73
UPF3AP1-201ENST00000413731 ERO1AQ96HE7 468 aa10.47□□□□□ -0.73
UPF3AP1-201ENST00000413731 GOPCQ9HD26 462 aa10.47□□□□□ -0.73
UPF3AP1-201ENST00000413731 PTPN22Q9Y2R2 807 aa10.47□□□□□ -0.73
UPF3AP1-201ENST00000413731 BOLA1Q9Y3E2 137 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms