RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 ZGPATQ8N5A5 531 aaKnown RBP7.97□□□□□ -1.13
VPS41-204ENST00000413141 WDR66Q8TBY9 1149 aa7.97□□□□□ -1.13
VPS41-204ENST00000413141 ZNF384Q8TF68 577 aa7.97□□□□□ -1.13
VPS41-204ENST00000413141 KCNB2Q92953 911 aa7.97□□□□□ -1.13
VPS41-204ENST00000413141 ZC3H12CQ9C0D7 883 aaKnown RBP7.97□□□□□ -1.13
VPS41-204ENST00000413141 RAI14Q9P0K7 980 aa7.97□□□□□ -1.13
VPS41-204ENST00000413141 JAG2Q9Y219 1238 aa7.97□□□□□ -1.13
VPS41-204ENST00000413141 CD2APQ9Y5K6 639 aa7.97□□□□□ -1.13
VPS41-204ENST00000413141 SNX14Q9Y5W7 946 aa7.97□□□□□ -1.13
VPS41-204ENST00000413141 FAM205AQ6ZU69 1335 aa7.97□□□□□ -1.13
VPS41-204ENST00000413141 RPAP1Q9BWH6 1393 aaPredicted RBP7.97□□□□□ -1.13
VPS41-204ENST00000413141 SLC27A2O14975 620 aa7.96□□□□□ -1.14
VPS41-204ENST00000413141 RIMBP2O15034 1052 aa7.96□□□□□ -1.14
VPS41-204ENST00000413141 MBD4O95243 580 aa7.96□□□□□ -1.14
VPS41-204ENST00000413141 HSPD1P10809 573 aaKnown RBP7.96□□□□□ -1.14
VPS41-204ENST00000413141 CYP7A1P22680 504 aa7.96□□□□□ -1.14
VPS41-204ENST00000413141 MECOMQ03112 1051 aa7.96□□□□□ -1.14
VPS41-204ENST00000413141 SOGA3Q5TF21 947 aa7.96□□□□□ -1.14
VPS41-204ENST00000413141 CREB3L3Q68CJ9 461 aa7.96□□□□□ -1.14
VPS41-204ENST00000413141 SPTY2D1Q68D10 685 aaPredicted RBP7.96□□□□□ -1.14
VPS41-204ENST00000413141 NAA16Q6N069 864 aaPredicted RBP7.96□□□□□ -1.14
VPS41-204ENST00000413141 ERICH6Q7L0X2 663 aa7.96□□□□□ -1.14
VPS41-204ENST00000413141 RASEFQ8IZ41 740 aa7.96□□□□□ -1.14
VPS41-204ENST00000413141 SUPT20HQ8NEM7 779 aa7.96□□□□□ -1.14
VPS41-204ENST00000413141 AIDAQ96BJ3 306 aa7.96□□□□□ -1.14
VPS41-204ENST00000413141 NSUN4Q96CB9 384 aaKnown RBP7.96□□□□□ -1.14
VPS41-204ENST00000413141 PSMD1Q99460 953 aa7.96□□□□□ -1.14
VPS41-204ENST00000413141 PIM2Q9P1W9 311 aa7.96□□□□□ -1.14
VPS41-204ENST00000413141 ZMYM6O95789 1325 aa7.96□□□□□ -1.14
VPS41-204ENST00000413141 PSME4Q14997 1843 aa7.96□□□□□ -1.14
VPS41-204ENST00000413141 ARFGEF1Q9Y6D6 1849 aa7.96□□□□□ -1.14
VPS41-204ENST00000413141 FER1L6Q2WGJ9 1857 aa7.96□□□□□ -1.14
VPS41-204ENST00000413141 CHD4Q14839 1912 aa7.95□□□□□ -1.14
VPS41-204ENST00000413141 COL4A5P29400 1685 aa7.95□□□□□ -1.14
VPS41-204ENST00000413141 LAMB1P07942 1786 aa7.95□□□□□ -1.14
VPS41-204ENST00000413141 LDHBP07195 334 aaKnown RBP7.95□□□□□ -1.14
VPS41-204ENST00000413141 ZKSCAN1P17029 563 aaPredicted RBP7.95□□□□□ -1.14
VPS41-204ENST00000413141 KIAA2012Q0VF49 1180 aa7.95□□□□□ -1.14
VPS41-204ENST00000413141 BECN1Q14457 450 aa7.95□□□□□ -1.14
VPS41-204ENST00000413141 GRIK5Q16478 980 aa7.95□□□□□ -1.14
VPS41-204ENST00000413141 AOC3Q16853 763 aa7.95□□□□□ -1.14
VPS41-204ENST00000413141 DOK7Q18PE1 504 aa7.95□□□□□ -1.14
VPS41-204ENST00000413141 DALRD3Q5D0E6 543 aaKnown RBP7.95□□□□□ -1.14
VPS41-204ENST00000413141 MFSD14BQ5SR56 506 aa7.95□□□□□ -1.14
VPS41-204ENST00000413141 RNF20Q5VTR2 975 aa7.95□□□□□ -1.14
VPS41-204ENST00000413141 DZIP1Q86YF9 867 aaKnown RBP7.95□□□□□ -1.14
VPS41-204ENST00000413141 HSCBQ8IWL3 235 aa7.95□□□□□ -1.14
VPS41-204ENST00000413141 RTKN2Q8IZC4 609 aa7.95□□□□□ -1.14
VPS41-204ENST00000413141 KLHL34Q8N239 644 aa7.95□□□□□ -1.14
VPS41-204ENST00000413141 LCORLQ8N3X6 602 aa7.95□□□□□ -1.14
VPS41-204ENST00000413141 MIGA1Q8NAN2 632 aa7.95□□□□□ -1.14
VPS41-204ENST00000413141 TBC1D22AQ8WUA7 517 aa7.95□□□□□ -1.14
VPS41-204ENST00000413141 SNX21Q969T3 373 aa7.95□□□□□ -1.14
VPS41-204ENST00000413141 STRBPQ96SI9 672 aaKnown RBP7.95□□□□□ -1.14
VPS41-204ENST00000413141 RIOK1Q9BRS2 568 aaKnown RBP7.95□□□□□ -1.14
VPS41-204ENST00000413141 TBC1D2Q9BYX2 928 aa7.95□□□□□ -1.14
VPS41-204ENST00000413141 ARMT1Q9H993 441 aa7.95□□□□□ -1.14
VPS41-204ENST00000413141 DBNDD1Q9H9R9 158 aa7.95□□□□□ -1.14
VPS41-204ENST00000413141 SPON1Q9HCB6 807 aa7.95□□□□□ -1.14
VPS41-204ENST00000413141 PPP1R1BQ9UD71 204 aaPredicted RBP7.95□□□□□ -1.14
VPS41-204ENST00000413141 SCN9AQ15858 1988 aa7.95□□□□□ -1.14
VPS41-204ENST00000413141 DDX60LQ5H9U9 1706 aaKnown RBP7.95□□□□□ -1.14
VPS41-204ENST00000413141 ADAMTSL1Q8N6G6 1762 aa7.94□□□□□ -1.14
VPS41-204ENST00000413141 MAGEB6P1A0A0J9YX57 407 aa7.94□□□□□ -1.14
VPS41-204ENST00000413141 PPIP5K2O43314 1243 aa7.94□□□□□ -1.14
VPS41-204ENST00000413141 ECE2O60344 883 aa7.94□□□□□ -1.14
VPS41-204ENST00000413141 CD2BP2O95400 341 aaKnown RBP7.94□□□□□ -1.14
VPS41-204ENST00000413141 CYP21A2P08686 494 aa7.94□□□□□ -1.14
VPS41-204ENST00000413141 GNAT2P19087 354 aa7.94□□□□□ -1.14
VPS41-204ENST00000413141 GTF2IP78347 998 aa7.94□□□□□ -1.14
VPS41-204ENST00000413141 ADCK5Q3MIX3 580 aa7.94□□□□□ -1.14
VPS41-204ENST00000413141 TSGA10IPQ3SY00 556 aa7.94□□□□□ -1.14
VPS41-204ENST00000413141 PODNQ7Z5L7 613 aa7.94□□□□□ -1.14
VPS41-204ENST00000413141 EPB41L4AQ9HCS5 686 aaPredicted RBP7.94□□□□□ -1.14
VPS41-204ENST00000413141 TAF6LQ9Y6J9 622 aa7.94□□□□□ -1.14
VPS41-204ENST00000413141 MROH7-TTC4A0A0A0MT08 1334 aa7.94□□□□□ -1.14
VPS41-204ENST00000413141 NAV1Q8NEY1 1877 aa7.94□□□□□ -1.14
VPS41-204ENST00000413141 G3V3G9 751 aa7.93□□□□□ -1.14
VPS41-204ENST00000413141 ST18O60284 1047 aa7.93□□□□□ -1.14
VPS41-204ENST00000413141 CASTP20810 708 aaKnown RBP7.93□□□□□ -1.14
VPS41-204ENST00000413141 DYNLL1P63167 89 aaKnown RBP7.93□□□□□ -1.14
VPS41-204ENST00000413141 GSTO1P78417 241 aa7.93□□□□□ -1.14
VPS41-204ENST00000413141 KRT32Q14532 448 aa7.93□□□□□ -1.14
VPS41-204ENST00000413141 DIXDC1Q155Q3 683 aa7.93□□□□□ -1.14
VPS41-204ENST00000413141 DCAF8Q5TAQ9 597 aa7.93□□□□□ -1.14
VPS41-204ENST00000413141 TTLL5Q6EMB2 1281 aa7.93□□□□□ -1.14
VPS41-204ENST00000413141 STOX1Q6ZVD7 989 aa7.93□□□□□ -1.14
VPS41-204ENST00000413141 CERS5Q8N5B7 392 aa7.93□□□□□ -1.14
VPS41-204ENST00000413141 IL27Q8NEV9 243 aa7.93□□□□□ -1.14
VPS41-204ENST00000413141 NLGN2Q8NFZ4 835 aa7.93□□□□□ -1.14
VPS41-204ENST00000413141 FBXW7Q969H0 707 aa7.93□□□□□ -1.14
VPS41-204ENST00000413141 JAKMIP1Q96N16 626 aaKnown RBP7.93□□□□□ -1.14
VPS41-204ENST00000413141 UPF3BQ9BZI7 483 aaKnown RBP7.93□□□□□ -1.14
VPS41-204ENST00000413141 TM6SF1Q9BZW5 370 aa7.93□□□□□ -1.14
VPS41-204ENST00000413141 CTNNA3Q9UI47 895 aa7.93□□□□□ -1.14
VPS41-204ENST00000413141 SUGT1Q9Y2Z0 365 aa7.93□□□□□ -1.14
VPS41-204ENST00000413141 SLC4A4Q9Y6R1 1079 aa7.93□□□□□ -1.14
VPS41-204ENST00000413141 GAKO14976 1311 aa7.93□□□□□ -1.14
VPS41-204ENST00000413141 MYH2Q9UKX2 1941 aa7.93□□□□□ -1.14
VPS41-204ENST00000413141 FOCADQ5VW36 1801 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms