RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 CAVIN2O95810 425 aa16.07■□□□□ 0.16
NUB1-201ENST00000413040 CPLX2Q6PUV4 134 aaKnown RBP16.07■□□□□ 0.16
NUB1-201ENST00000413040 MTERF4Q7Z6M4 381 aaKnown RBP16.07■□□□□ 0.16
NUB1-201ENST00000413040 KLHL34Q8N239 644 aa16.07■□□□□ 0.16
NUB1-201ENST00000413040 NAT10Q9H0A0 1025 aaKnown RBP16.07■□□□□ 0.16
NUB1-201ENST00000413040 SENP2Q9HC62 589 aa16.07■□□□□ 0.16
NUB1-201ENST00000413040 PRDM10Q9NQV6 1147 aa16.07■□□□□ 0.16
NUB1-201ENST00000413040 WWC3Q9ULE0 1092 aa16.07■□□□□ 0.16
NUB1-201ENST00000413040 RIPOR2Q9Y4F9 1068 aa16.07■□□□□ 0.16
NUB1-201ENST00000413040 COL18A1P39060 1754 aa16.07■□□□□ 0.16
NUB1-201ENST00000413040 SLC3A2P08195 630 aaKnown RBP16.07■□□□□ 0.16
NUB1-201ENST00000413040 CTSWP56202 376 aa16.07■□□□□ 0.16
NUB1-201ENST00000413040 DPCR1Q3MIW9 517 aa16.07■□□□□ 0.16
NUB1-201ENST00000413040 NKX2-3Q8TAU0 364 aa16.07■□□□□ 0.16
NUB1-201ENST00000413040 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.07■□□□□ 0.16
NUB1-201ENST00000413040 TEX13AQ9BXU3 409 aaPredicted RBP16.07■□□□□ 0.16
NUB1-201ENST00000413040 RTEL1Q9NZ71 1219 aa16.07■□□□□ 0.16
NUB1-201ENST00000413040 LMTK3Q96Q04 1460 aa16.06■□□□□ 0.16
NUB1-201ENST00000413040 SKILP12757 684 aa16.06■□□□□ 0.16
NUB1-201ENST00000413040 CCDC102BQ68D86 513 aa16.06■□□□□ 0.16
NUB1-201ENST00000413040 CYB5R4Q7L1T6 521 aa16.06■□□□□ 0.16
NUB1-201ENST00000413040 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.06■□□□□ 0.16
NUB1-201ENST00000413040 TBC1D10CQ8IV04 446 aa16.06■□□□□ 0.16
NUB1-201ENST00000413040 ATP2B1P20020 1258 aa16.06■□□□□ 0.16
NUB1-201ENST00000413040 ADD2P35612 726 aa16.06■□□□□ 0.16
NUB1-201ENST00000413040 ATL3Q6DD88 541 aa16.06■□□□□ 0.16
NUB1-201ENST00000413040 FMR1NBQ8N0W7 255 aaPredicted RBP16.06■□□□□ 0.16
NUB1-201ENST00000413040 ZNF710Q8N1W2 664 aa16.06■□□□□ 0.16
NUB1-201ENST00000413040 KCNG4Q8TDN1 519 aa16.06■□□□□ 0.16
NUB1-201ENST00000413040 ANGEL1Q9UNK9 670 aaKnown RBP16.06■□□□□ 0.16
NUB1-201ENST00000413040 IQSEC3Q9UPP2 1182 aaPredicted RBP16.06■□□□□ 0.16
NUB1-201ENST00000413040 CSF1RP07333 972 aa16.06■□□□□ 0.16
NUB1-201ENST00000413040 CCDC69A6NI79 296 aa16.05■□□□□ 0.16
NUB1-201ENST00000413040 ZNF202O95125 648 aa16.05■□□□□ 0.16
NUB1-201ENST00000413040 ANO1Q5XXA6 986 aa16.05■□□□□ 0.16
NUB1-201ENST00000413040 DZIP3Q86Y13 1208 aaKnown RBP16.05■□□□□ 0.16
NUB1-201ENST00000413040 LRRC8AQ8IWT6 810 aa16.05■□□□□ 0.16
NUB1-201ENST00000413040 ZKSCAN3Q9BRR0 538 aa16.05■□□□□ 0.16
NUB1-201ENST00000413040 CTDSPL2Q05D32 466 aa16.05■□□□□ 0.16
NUB1-201ENST00000413040 TRIM28Q13263 835 aaKnown RBP16.05■□□□□ 0.16
NUB1-201ENST00000413040 DHX40Q8IX18 779 aaKnown RBP16.05■□□□□ 0.16
NUB1-201ENST00000413040 MPHOSPH8Q99549 860 aa16.05■□□□□ 0.16
NUB1-201ENST00000413040 NAPBQ9H115 298 aa16.05■□□□□ 0.16
NUB1-201ENST00000413040 COL5A2P05997 1499 aaPredicted RBP16.04■□□□□ 0.16
NUB1-201ENST00000413040 UBE2Q2LH0YL09 131 aa16.04■□□□□ 0.16
NUB1-201ENST00000413040 PDE8BO95263 885 aa16.04■□□□□ 0.16
NUB1-201ENST00000413040 PDE6AP16499 860 aa16.04■□□□□ 0.16
NUB1-201ENST00000413040 CBX1P83916 185 aa16.04■□□□□ 0.16
NUB1-201ENST00000413040 TRIM29Q14134 588 aa16.04■□□□□ 0.16
NUB1-201ENST00000413040 TMEM67Q5HYA8 995 aa16.04■□□□□ 0.16
NUB1-201ENST00000413040 KIAA1468Q9P260 1216 aa16.04■□□□□ 0.16
NUB1-201ENST00000413040 LMOD1P29536 600 aaPredicted RBP16.04■□□□□ 0.16
NUB1-201ENST00000413040 PPP4R3BQ5MIZ7 849 aa16.04■□□□□ 0.16
NUB1-201ENST00000413040 MAGEB6Q8N7X4 407 aa16.04■□□□□ 0.16
NUB1-201ENST00000413040 FBXO3Q9UK99 471 aa16.04■□□□□ 0.16
NUB1-201ENST00000413040 ZNF335Q9H4Z2 1342 aaPredicted RBP16.04■□□□□ 0.16
NUB1-201ENST00000413040 USP27XA6NNY8 438 aa16.03■□□□□ 0.16
NUB1-201ENST00000413040 GOLGA8AA7E2F4 631 aa16.03■□□□□ 0.16
NUB1-201ENST00000413040 IFIT3O14879 490 aaKnown RBP16.03■□□□□ 0.16
NUB1-201ENST00000413040 KIF23Q02241 960 aaPredicted RBP16.03■□□□□ 0.16
NUB1-201ENST00000413040 VPS37DQ86XT2 251 aa16.03■□□□□ 0.16
NUB1-201ENST00000413040 SLC26A6Q9BXS9 759 aa16.03■□□□□ 0.16
NUB1-201ENST00000413040 SPDYE4A6NLX3 237 aa16.03■□□□□ 0.16
NUB1-201ENST00000413040 ZBTB43O43298 467 aa16.03■□□□□ 0.16
NUB1-201ENST00000413040 CDC27P30260 824 aa16.03■□□□□ 0.16
NUB1-201ENST00000413040 IARSP41252 1262 aaKnown RBP16.03■□□□□ 0.16
NUB1-201ENST00000413040 NAA30Q147X3 362 aaPredicted RBP16.03■□□□□ 0.16
NUB1-201ENST00000413040 TTF1Q15361 905 aaPredicted RBP16.03■□□□□ 0.16
NUB1-201ENST00000413040 KRT40Q6A162 431 aa16.03■□□□□ 0.16
NUB1-201ENST00000413040 PDCL2Q8N4E4 241 aa16.03■□□□□ 0.16
NUB1-201ENST00000413040 CCDC112Q8NEF3 446 aa16.03■□□□□ 0.16
NUB1-201ENST00000413040 ARMT1Q9H993 441 aa16.03■□□□□ 0.16
NUB1-201ENST00000413040 IFNKQ9P0W0 207 aa16.03■□□□□ 0.16
NUB1-201ENST00000413040 LAMA4Q16363 1823 aa16.03■□□□□ 0.16
NUB1-201ENST00000413040 MBD4O95243 580 aa16.03■□□□□ 0.16
NUB1-201ENST00000413040 PFKFB1P16118 471 aa16.03■□□□□ 0.16
NUB1-201ENST00000413040 SPECC1Q5M775 1068 aa16.03■□□□□ 0.16
NUB1-201ENST00000413040 TMC6Q7Z403 805 aa16.03■□□□□ 0.16
NUB1-201ENST00000413040 BRAPQ7Z569 592 aa16.03■□□□□ 0.16
NUB1-201ENST00000413040 DCCP43146 1447 aa16.02■□□□□ 0.16
NUB1-201ENST00000413040 YEATS4O95619 227 aa16.02■□□□□ 0.16
NUB1-201ENST00000413040 APOA5Q6Q788 366 aa16.02■□□□□ 0.16
NUB1-201ENST00000413040 CLIC6Q96NY7 704 aa16.02■□□□□ 0.16
NUB1-201ENST00000413040 PDE8AO60658 829 aa16.02■□□□□ 0.15
NUB1-201ENST00000413040 SYKP43405 635 aa16.02■□□□□ 0.15
NUB1-201ENST00000413040 HSP90AA4PQ58FG1 418 aa16.02■□□□□ 0.15
NUB1-201ENST00000413040 CMTR1Q8N1G2 835 aaKnown RBP16.02■□□□□ 0.15
NUB1-201ENST00000413040 MIGA1Q8NAN2 632 aa16.02■□□□□ 0.15
NUB1-201ENST00000413040 MRFAP1L1Q96HT8 127 aa16.02■□□□□ 0.15
NUB1-201ENST00000413040 SLC4A9Q96Q91 983 aa16.02■□□□□ 0.15
NUB1-201ENST00000413040 KCPQ6ZWJ8 1503 aa16.01■□□□□ 0.15
NUB1-201ENST00000413040 WDHD1O75717 1129 aaPredicted RBP16.01■□□□□ 0.15
NUB1-201ENST00000413040 TDO2P48775 406 aa16.01■□□□□ 0.15
NUB1-201ENST00000413040 NUP133Q8WUM0 1156 aa16.01■□□□□ 0.15
NUB1-201ENST00000413040 NBPF3Q9H094 633 aa16.01■□□□□ 0.15
NUB1-201ENST00000413040 SEC31BQ9NQW1 1179 aa16.01■□□□□ 0.15
NUB1-201ENST00000413040 POLR3EQ9NVU0 708 aa16.01■□□□□ 0.15
NUB1-201ENST00000413040 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.01■□□□□ 0.15
NUB1-201ENST00000413040 V9GYY5 206 aaPredicted RBP16.01■□□□□ 0.15
NUB1-201ENST00000413040 NPHP1O15259 732 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms