RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 XDHP47989 1333 aa12.09□□□□□ -0.47
SOX9-AS1-201ENST00000412640 MYPNQ86TC9 1320 aa12.09□□□□□ -0.47
SOX9-AS1-201ENST00000412640 PRUNE2Q8WUY3 3088 aa12.08□□□□□ -0.48
SOX9-AS1-201ENST00000412640 WDHD1O75717 1129 aaPredicted RBP12.08□□□□□ -0.48
SOX9-AS1-201ENST00000412640 ATP2B4P23634 1241 aa12.08□□□□□ -0.48
SOX9-AS1-201ENST00000412640 HOXD10P28358 340 aa12.08□□□□□ -0.48
SOX9-AS1-201ENST00000412640 TTLL5Q6EMB2 1281 aa12.08□□□□□ -0.48
SOX9-AS1-201ENST00000412640 SYMPKQ92797 1274 aaKnown RBP12.08□□□□□ -0.48
SOX9-AS1-201ENST00000412640 DEFB118Q96PH6 123 aa12.08□□□□□ -0.48
SOX9-AS1-201ENST00000412640 CCDC85AQ96PX6 553 aaPredicted RBP12.08□□□□□ -0.48
SOX9-AS1-201ENST00000412640 VEZTQ9HBM0 779 aa12.08□□□□□ -0.48
SOX9-AS1-201ENST00000412640 IFT57Q9NWB7 429 aa12.08□□□□□ -0.48
SOX9-AS1-201ENST00000412640 CPA4Q9UI42 421 aa12.08□□□□□ -0.48
SOX9-AS1-201ENST00000412640 PPP2R3BQ9Y5P8 575 aa12.08□□□□□ -0.48
SOX9-AS1-201ENST00000412640 TMEM265A0A087WTH1 108 aa12.07□□□□□ -0.48
SOX9-AS1-201ENST00000412640 BTBD19C9JJ37 291 aa12.07□□□□□ -0.48
SOX9-AS1-201ENST00000412640 RARSP54136 660 aaKnown RBP12.07□□□□□ -0.48
SOX9-AS1-201ENST00000412640 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.07□□□□□ -0.48
SOX9-AS1-201ENST00000412640 MAFAQ8NHW3 353 aaPredicted RBP12.07□□□□□ -0.48
SOX9-AS1-201ENST00000412640 DIS3LQ8TF46 1054 aaKnown RBP12.07□□□□□ -0.48
SOX9-AS1-201ENST00000412640 ZNF804BA4D1E1 1349 aa12.07□□□□□ -0.48
SOX9-AS1-201ENST00000412640 TNFRSF10AO00220 468 aa12.06□□□□□ -0.48
SOX9-AS1-201ENST00000412640 MMP14P50281 582 aa12.06□□□□□ -0.48
SOX9-AS1-201ENST00000412640 GNAI1P63096 354 aa12.06□□□□□ -0.48
SOX9-AS1-201ENST00000412640 PRKCZQ05513 592 aa12.06□□□□□ -0.48
SOX9-AS1-201ENST00000412640 RASA3Q14644 834 aa12.06□□□□□ -0.48
SOX9-AS1-201ENST00000412640 FAM109BQ6ICB4 259 aaPredicted RBP12.06□□□□□ -0.48
SOX9-AS1-201ENST00000412640 C17orf99Q6UX52 265 aa12.06□□□□□ -0.48
SOX9-AS1-201ENST00000412640 NECAB2Q7Z6G3 386 aa12.06□□□□□ -0.48
SOX9-AS1-201ENST00000412640 ISCA1Q9BUE6 129 aa12.06□□□□□ -0.48
SOX9-AS1-201ENST00000412640 OTOFQ9HC10 1997 aa12.06□□□□□ -0.48
SOX9-AS1-201ENST00000412640 AOX1Q06278 1338 aa12.06□□□□□ -0.48
SOX9-AS1-201ENST00000412640 GTF2IP78347 998 aa12.05□□□□□ -0.48
SOX9-AS1-201ENST00000412640 VGLL4Q14135 290 aa12.05□□□□□ -0.48
SOX9-AS1-201ENST00000412640 TXNRD3Q86VQ6 643 aa12.05□□□□□ -0.48
SOX9-AS1-201ENST00000412640 CDX2Q99626 313 aaPredicted RBP12.05□□□□□ -0.48
SOX9-AS1-201ENST00000412640 GABRQQ9UN88 632 aa12.05□□□□□ -0.48
SOX9-AS1-201ENST00000412640 MED23Q9ULK4 1368 aa12.05□□□□□ -0.48
SOX9-AS1-201ENST00000412640 ZBTB22O15209 634 aa12.04□□□□□ -0.48
SOX9-AS1-201ENST00000412640 PLIN1O60240 522 aa12.04□□□□□ -0.48
SOX9-AS1-201ENST00000412640 BCAR3O75815 825 aa12.04□□□□□ -0.48
SOX9-AS1-201ENST00000412640 ELNP15502 786 aa12.04□□□□□ -0.48
SOX9-AS1-201ENST00000412640 EXOSC9Q06265 439 aaKnown RBP12.04□□□□□ -0.48
SOX9-AS1-201ENST00000412640 PDE3AQ14432 1141 aa12.04□□□□□ -0.48
SOX9-AS1-201ENST00000412640 CDAN1Q8IWY9 1227 aa12.04□□□□□ -0.48
SOX9-AS1-201ENST00000412640 SLAIN1Q8ND83 568 aa12.04□□□□□ -0.48
SOX9-AS1-201ENST00000412640 HELBQ8NG08 1087 aaPredicted RBP12.04□□□□□ -0.48
SOX9-AS1-201ENST00000412640 TSR2Q969E8 191 aaKnown RBP12.04□□□□□ -0.48
SOX9-AS1-201ENST00000412640 PRMT6Q96LA8 375 aaPredicted RBP12.04□□□□□ -0.48
SOX9-AS1-201ENST00000412640 COA1Q9GZY4 146 aa12.04□□□□□ -0.48
SOX9-AS1-201ENST00000412640 TTC28Q96AY4 2481 aa12.04□□□□□ -0.48
SOX9-AS1-201ENST00000412640 MUC3AQ02505 3323 aa12.03□□□□□ -0.48
SOX9-AS1-201ENST00000412640 LAMA2P24043 3122 aaKnown RBP12.03□□□□□ -0.48
SOX9-AS1-201ENST00000412640 F8W031 263 aaPredicted RBP12.03□□□□□ -0.48
SOX9-AS1-201ENST00000412640 MYO1BO43795 1136 aa12.03□□□□□ -0.48
SOX9-AS1-201ENST00000412640 ADCY3O60266 1144 aa12.03□□□□□ -0.48
SOX9-AS1-201ENST00000412640 CETPP11597 493 aa12.03□□□□□ -0.48
SOX9-AS1-201ENST00000412640 MAP3K9P80192 1104 aa12.03□□□□□ -0.48
SOX9-AS1-201ENST00000412640 MAP3K12Q12852 859 aa12.03□□□□□ -0.48
SOX9-AS1-201ENST00000412640 CFAP100Q494V2 611 aa12.03□□□□□ -0.48
SOX9-AS1-201ENST00000412640 ANKRD18AQ8IVF6 992 aa12.03□□□□□ -0.48
SOX9-AS1-201ENST00000412640 EXOC6Q8TAG9 804 aa12.03□□□□□ -0.48
SOX9-AS1-201ENST00000412640 CHL1O00533 1208 aa12.02□□□□□ -0.49
SOX9-AS1-201ENST00000412640 INHAP05111 366 aa12.02□□□□□ -0.49
SOX9-AS1-201ENST00000412640 ALDH1L2Q3SY69 923 aa12.02□□□□□ -0.49
SOX9-AS1-201ENST00000412640 CCDC152Q4G0S7 254 aa12.02□□□□□ -0.49
SOX9-AS1-201ENST00000412640 ZNF697Q5TEC3 545 aa12.02□□□□□ -0.49
SOX9-AS1-201ENST00000412640 CERS5Q8N5B7 392 aa12.02□□□□□ -0.49
SOX9-AS1-201ENST00000412640 MTMR14Q8NCE2 650 aa12.02□□□□□ -0.49
SOX9-AS1-201ENST00000412640 PLBD2Q8NHP8 589 aa12.02□□□□□ -0.49
SOX9-AS1-201ENST00000412640 JARID2Q92833 1246 aaPredicted RBP12.02□□□□□ -0.49
SOX9-AS1-201ENST00000412640 CRISPLD2Q9H0B8 497 aa12.02□□□□□ -0.49
SOX9-AS1-201ENST00000412640 ZCCHC17Q9NP64 241 aaKnown RBP12.02□□□□□ -0.49
SOX9-AS1-201ENST00000412640 TSPYL4Q9UJ04 414 aa12.02□□□□□ -0.49
SOX9-AS1-201ENST00000412640 CSADQ9Y600 493 aa12.02□□□□□ -0.49
SOX9-AS1-201ENST00000412640 SPDYE2BA6NHP3 402 aa12.01□□□□□ -0.49
SOX9-AS1-201ENST00000412640 SPDYE6P0CI01 402 aa12.01□□□□□ -0.49
SOX9-AS1-201ENST00000412640 KLRK1P26718 216 aa12.01□□□□□ -0.49
SOX9-AS1-201ENST00000412640 CCT4P50991 539 aaKnown RBP12.01□□□□□ -0.49
SOX9-AS1-201ENST00000412640 MDM2Q00987 491 aaPredicted RBP12.01□□□□□ -0.49
SOX9-AS1-201ENST00000412640 C20orf194Q5TEA3 1177 aa12.01□□□□□ -0.49
SOX9-AS1-201ENST00000412640 MYLIPQ8WY64 445 aa12.01□□□□□ -0.49
SOX9-AS1-201ENST00000412640 MINPP1Q9UNW1 487 aa12.01□□□□□ -0.49
SOX9-AS1-201ENST00000412640 SPDYE5A6NIY4 337 aa12□□□□□ -0.49
SOX9-AS1-201ENST00000412640 IRF6O14896 467 aa12□□□□□ -0.49
SOX9-AS1-201ENST00000412640 RBM5P52756 815 aaKnown RBP eCLIP12□□□□□ -0.49
SOX9-AS1-201ENST00000412640 SNAPC2Q13487 334 aa12□□□□□ -0.49
SOX9-AS1-201ENST00000412640 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12□□□□□ -0.49
SOX9-AS1-201ENST00000412640 CRBNQ96SW2 442 aa12□□□□□ -0.49
SOX9-AS1-201ENST00000412640 PAK6Q9NQU5 681 aaPredicted RBP12□□□□□ -0.49
SOX9-AS1-201ENST00000412640 MBIPQ9NS73 344 aa12□□□□□ -0.49
SOX9-AS1-201ENST00000412640 BABAM1Q9NWV8 329 aa12□□□□□ -0.49
SOX9-AS1-201ENST00000412640 FLT3LGP49771 235 aa11.99□□□□□ -0.49
SOX9-AS1-201ENST00000412640 FCGRTP55899 365 aa11.99□□□□□ -0.49
SOX9-AS1-201ENST00000412640 AAMPQ13685 434 aa11.99□□□□□ -0.49
SOX9-AS1-201ENST00000412640 TJAP1Q5JTD0 557 aa11.99□□□□□ -0.49
SOX9-AS1-201ENST00000412640 ZBTB38Q8NAP3 1195 aaPredicted RBP11.99□□□□□ -0.49
SOX9-AS1-201ENST00000412640 TEPSINQ96N21 525 aa11.99□□□□□ -0.49
SOX9-AS1-201ENST00000412640 ADGRA2Q96PE1 1338 aa11.99□□□□□ -0.49
SOX9-AS1-201ENST00000412640 ECM29Q5VYK3 1845 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms