RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 HSPA1AP0DMV8 641 aaKnown RBP23.28■■□□□ 1.32
TRIM56-202ENST00000412507 HSPA1BP0DMV9 641 aaKnown RBP23.28■■□□□ 1.32
TRIM56-202ENST00000412507 OS9Q13438 667 aaPredicted RBP23.28■■□□□ 1.32
TRIM56-202ENST00000412507 C20orf194Q5TEA3 1177 aa23.28■■□□□ 1.32
TRIM56-202ENST00000412507 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.28■■□□□ 1.32
TRIM56-202ENST00000412507 VEZTQ9HBM0 779 aa23.28■■□□□ 1.32
TRIM56-202ENST00000412507 DENND2AQ9ULE3 1009 aa23.28■■□□□ 1.32
TRIM56-202ENST00000412507 SEMA3EO15041 775 aa23.26■■□□□ 1.31
TRIM56-202ENST00000412507 HDLBPQ00341 1268 aaKnown RBP23.26■■□□□ 1.31
TRIM56-202ENST00000412507 DEFB129Q9H1M3 183 aa23.26■■□□□ 1.31
TRIM56-202ENST00000412507 TDRD3Q9H7E2 651 aaKnown RBP23.26■■□□□ 1.31
TRIM56-202ENST00000412507 NOP58Q9Y2X3 529 aaKnown RBP23.26■■□□□ 1.31
TRIM56-202ENST00000412507 SUGT1Q9Y2Z0 365 aa23.26■■□□□ 1.31
TRIM56-202ENST00000412507 AOC2O75106 756 aa23.25■■□□□ 1.31
TRIM56-202ENST00000412507 PDE3AQ14432 1141 aa23.25■■□□□ 1.31
TRIM56-202ENST00000412507 SPDYE2Q495Y8 402 aa23.25■■□□□ 1.31
TRIM56-202ENST00000412507 MOB2Q70IA6 237 aa23.25■■□□□ 1.31
TRIM56-202ENST00000412507 TEKT1Q969V4 418 aa23.25■■□□□ 1.31
TRIM56-202ENST00000412507 ZBTB40Q9NUA8 1239 aa23.25■■□□□ 1.31
TRIM56-202ENST00000412507 ZNF70Q9UC06 446 aaPredicted RBP23.25■■□□□ 1.31
TRIM56-202ENST00000412507 MAST3O60307 1309 aa23.25■■□□□ 1.31
TRIM56-202ENST00000412507 NF2P35240 595 aa23.24■■□□□ 1.31
TRIM56-202ENST00000412507 RASGRF1Q13972 1273 aa23.24■■□□□ 1.31
TRIM56-202ENST00000412507 GORABQ5T7V8 394 aa23.24■■□□□ 1.31
TRIM56-202ENST00000412507 RGMBQ6NW40 437 aa23.24■■□□□ 1.31
TRIM56-202ENST00000412507 ZBTB22O15209 634 aa23.23■■□□□ 1.31
TRIM56-202ENST00000412507 PRDX5P30044 214 aa23.23■■□□□ 1.31
TRIM56-202ENST00000412507 FKBP1BP68106 108 aa23.23■■□□□ 1.31
TRIM56-202ENST00000412507 MRIQ9BWK5 157 aa23.23■■□□□ 1.31
TRIM56-202ENST00000412507 GPR108Q9NPR9 543 aa23.23■■□□□ 1.31
TRIM56-202ENST00000412507 SALL1Q9NSC2 1324 aa23.23■■□□□ 1.31
TRIM56-202ENST00000412507 TTLL12Q14166 644 aaPredicted RBP23.22■■□□□ 1.31
TRIM56-202ENST00000412507 TNNI3KQ59H18 835 aa23.22■■□□□ 1.31
TRIM56-202ENST00000412507 ZDHHC15Q96MV8 337 aa23.22■■□□□ 1.31
TRIM56-202ENST00000412507 CHMP4BQ9H444 224 aaKnown RBP23.22■■□□□ 1.31
TRIM56-202ENST00000412507 EXOC6BQ9Y2D4 811 aa23.22■■□□□ 1.31
TRIM56-202ENST00000412507 PPP2R3BQ9Y5P8 575 aa23.22■■□□□ 1.31
TRIM56-202ENST00000412507 FPGT-TNNI3KV9GXZ4 949 aa23.22■■□□□ 1.31
TRIM56-202ENST00000412507 UBE2Q2LH0YL09 131 aa23.21■■□□□ 1.31
TRIM56-202ENST00000412507 LDHBP07195 334 aaKnown RBP23.21■■□□□ 1.31
TRIM56-202ENST00000412507 ZNF157P51786 506 aaPredicted RBP23.21■■□□□ 1.31
TRIM56-202ENST00000412507 PRKG1Q13976 671 aa23.21■■□□□ 1.31
TRIM56-202ENST00000412507 HHIPL2Q6UWX4 724 aa23.21■■□□□ 1.31
TRIM56-202ENST00000412507 RPAP2Q8IXW5 612 aaPredicted RBP23.21■■□□□ 1.31
TRIM56-202ENST00000412507 WBP1LQ9NX94 342 aa23.21■■□□□ 1.31
TRIM56-202ENST00000412507 OTOFQ9HC10 1997 aa23.21■■□□□ 1.31
TRIM56-202ENST00000412507 SSC5DA1L4H1 1573 aa23.2■■□□□ 1.3
TRIM56-202ENST00000412507 PDS5AQ29RF7 1337 aaKnown RBP23.2■■□□□ 1.3
TRIM56-202ENST00000412507 MAP2K2P36507 400 aa23.2■■□□□ 1.3
TRIM56-202ENST00000412507 RASA3Q14644 834 aa23.2■■□□□ 1.3
TRIM56-202ENST00000412507 DIXDC1Q155Q3 683 aa23.2■■□□□ 1.3
TRIM56-202ENST00000412507 DBNDD2Q9BQY9 259 aa23.2■■□□□ 1.3
TRIM56-202ENST00000412507 TCP10L2B9ZVM9 353 aa23.19■■□□□ 1.3
TRIM56-202ENST00000412507 ARID4AP29374 1257 aaPredicted RBP23.19■■□□□ 1.3
TRIM56-202ENST00000412507 MAP2K1Q02750 393 aaPredicted RBP23.19■■□□□ 1.3
TRIM56-202ENST00000412507 TNFAIP1Q13829 316 aa23.19■■□□□ 1.3
TRIM56-202ENST00000412507 APOBEC3HQ6NTF7 200 aaKnown RBP23.19■■□□□ 1.3
TRIM56-202ENST00000412507 SIRT2Q8IXJ6 389 aa23.19■■□□□ 1.3
TRIM56-202ENST00000412507 ZGPATQ8N5A5 531 aaKnown RBP23.19■■□□□ 1.3
TRIM56-202ENST00000412507 ZIC5Q96T25 663 aa23.19■■□□□ 1.3
TRIM56-202ENST00000412507 HMG20BQ9P0W2 317 aa23.19■■□□□ 1.3
TRIM56-202ENST00000412507 ABCF2Q9UG63 623 aa23.19■■□□□ 1.3
TRIM56-202ENST00000412507 FZD1Q9UP38 647 aa23.19■■□□□ 1.3
TRIM56-202ENST00000412507 FAM155AB1AL88 458 aaPredicted RBP23.18■■□□□ 1.3
TRIM56-202ENST00000412507 FOXN1O15353 648 aa23.18■■□□□ 1.3
TRIM56-202ENST00000412507 CACNB3P54284 484 aa23.18■■□□□ 1.3
TRIM56-202ENST00000412507 NBPF12Q5TAG4 269 aaPredicted RBP23.18■■□□□ 1.3
TRIM56-202ENST00000412507 PI16Q6UXB8 463 aa23.18■■□□□ 1.3
TRIM56-202ENST00000412507 CCDC102AQ96A19 550 aa23.18■■□□□ 1.3
TRIM56-202ENST00000412507 DAGLAQ9Y4D2 1042 aa23.18■■□□□ 1.3
TRIM56-202ENST00000412507 UQCRFS1P1P0C7P4 283 aa23.17■■□□□ 1.3
TRIM56-202ENST00000412507 NOGQ13253 232 aa23.17■■□□□ 1.3
TRIM56-202ENST00000412507 SPATA5Q8NB90 893 aa23.17■■□□□ 1.3
TRIM56-202ENST00000412507 AIDAQ96BJ3 306 aa23.17■■□□□ 1.3
TRIM56-202ENST00000412507 CCDC8Q9H0W5 538 aaPredicted RBP23.17■■□□□ 1.3
TRIM56-202ENST00000412507 ANGEL1Q9UNK9 670 aaKnown RBP23.17■■□□□ 1.3
TRIM56-202ENST00000412507 HMMRO75330 724 aa23.16■■□□□ 1.3
TRIM56-202ENST00000412507 SLC10A3P09131 477 aa23.16■■□□□ 1.3
TRIM56-202ENST00000412507 MCAMP43121 646 aa23.16■■□□□ 1.3
TRIM56-202ENST00000412507 TNNI2P48788 182 aa23.16■■□□□ 1.3
TRIM56-202ENST00000412507 SUPT20HL1Q3ZLR7 823 aa23.16■■□□□ 1.3
TRIM56-202ENST00000412507 TTC39AQ5SRH9 613 aa23.16■■□□□ 1.3
TRIM56-202ENST00000412507 ARMC9Q7Z3E5 817 aa23.16■■□□□ 1.3
TRIM56-202ENST00000412507 ERC1Q8IUD2 1116 aa23.16■■□□□ 1.3
TRIM56-202ENST00000412507 EAF2Q96CJ1 260 aaPredicted RBP23.16■■□□□ 1.3
TRIM56-202ENST00000412507 MAST2Q6P0Q8 1798 aa23.15■■□□□ 1.3
TRIM56-202ENST00000412507 CCDC158Q5M9N0 1113 aa23.15■■□□□ 1.3
TRIM56-202ENST00000412507 SPTY2D1Q68D10 685 aaPredicted RBP23.15■■□□□ 1.3
TRIM56-202ENST00000412507 RASAL3Q86YV0 1011 aa23.15■■□□□ 1.3
TRIM56-202ENST00000412507 CDAN1Q8IWY9 1227 aa23.15■■□□□ 1.3
TRIM56-202ENST00000412507 TMEM39BQ9GZU3 492 aa23.15■■□□□ 1.3
TRIM56-202ENST00000412507 TLR7Q9NYK1 1049 aaKnown RBP23.15■■□□□ 1.3
TRIM56-202ENST00000412507 TMOD2Q9NZR1 351 aa23.15■■□□□ 1.3
TRIM56-202ENST00000412507 DBNLQ9UJU6 430 aaKnown RBP23.15■■□□□ 1.3
TRIM56-202ENST00000412507 CDK5RAP2Q96SN8 1893 aa23.14■■□□□ 1.29
TRIM56-202ENST00000412507 HSP90AB4PQ58FF6 505 aa23.14■■□□□ 1.29
TRIM56-202ENST00000412507 TBC1D9Q6ZT07 1266 aa23.14■■□□□ 1.29
TRIM56-202ENST00000412507 ERICH6Q7L0X2 663 aa23.14■■□□□ 1.29
TRIM56-202ENST00000412507 DZIP1Q86YF9 867 aaKnown RBP23.14■■□□□ 1.29
TRIM56-202ENST00000412507 TEPSINQ96N21 525 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms